SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 110324,50249,54791,_gap_,53187,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

110324 - Ribosomal L27 protein-like
50249 - Nucleic acid-binding proteins
54791 - Eukaryotic type KH-domain (KH-domain type I)
53187 - Zn-dependent exopeptidases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Oryza_punctata_22 1

Strains
Genome     Number
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 40

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