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Domain combinations for 117281,50965 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

117281 - Kelch motif
50965 - Galactose oxidase, central domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   4
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Pongo_abelii_76_2   (Sumatran orangutan)   2
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Macaca_mulatta_76_1   (Rhesus monkey)   1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_76_3   (Small-eared galago)   1
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   2
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Oryctolagus_cuniculus_76_2   (Rabbit)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   0
Vicugna_pacos_76_1   (Alpaca)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Felis_catus_76_6.2   (Domestic cat)   1
Equus_caballus_76_2   (Horse)   0
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Pteropus_vampyrus_76_1   (Large flying fox)   2
Sorex_araneus_76_1   (European shrew)   0
Procavia_capensis_76_1   (Cape rock hyrax)   0
Loxodonta_africana_76_3   (African savanna elephant)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   2
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_76_5   (Platypus)   0
Saccoglossus_kowalevskii_v3.0 1
Meleagris_gallopavo_76_2   (Turkey)   0
Gallus_gallus_76_4   (Chicken)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Anolis_carolinensis_76_2.0   (Green anole)   1
Xenopus_laevis_   (African clawed frog)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   2
Latimeria_chalumnae_76_1   (Coelacanth)   2
Lepisosteus_oculatus_76   (Spotted gar)   1
Takifugu_rubripes_76_4   (Torafugu)   5
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   2
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   2
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   4
Oikopleura_dioica 0
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1
Adineta_vaga 9
Octopus_bimaculoides_280 1
Crassostrea_gigas_22   (Pacific oyster)   2
Lottia_gigantea_   (Owl limpet)   1
Capitella_sp._I_ 2
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1
Nasonia_vitripennis_   (Jewel wasp)   1
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   0
Lucilia_cuprina   (Australian sheep blowfly)   0
Drosophila_grimshawi_1.3 0
Drosophila_melanogaster_76_5   (Fruit fly)   2
Drosophila_ananassae_1.3 0
Drosophila_virilis_1.2 0
Drosophila_mojavensis_1.3 0
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   0
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   0
Anopheles_darlingi_22   (American malaria mosquito)   0
Tribolium_castaneum_3.0   (Red flour beetle)   1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   0
Acyrthosiphon_pisum_   (Pea aphid)   0
Rhodnius_prolixus_22 0
Strigamia_maritima_22 0
Tetranychus_urticae_   (Two-spotted spider mite)   1
Meloidogyne_hapla_ 1
Onchocerca_volvulus_22 1
Caenorhabditis_japonica_ 0
Trichinella_spiralis_22 1
Echinococcus_granulosus_ 0
Schistosoma_mansoni_ 0
Thelohanellus_kitauei 4
Acropora_digitifera_v1.0 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   1
Hydra_vulgaris 1
Amphimedon_queenslandica 6
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 0
Sphaeroforma_arctica_JP610_ 0
Capsaspora_owczarzaki_ATCC_30864_ 0
Phycomyces_blakesleeanus_ 0
Rhizopus_oryzae_RA_99-880_ 0
Mucor_circinelloides_ 0
Rhizomucor_miehei_CAU432_ 0
Ustilago_maydis_ 0
Microbotryum_violaceum_22 0
Wallemia_sebi_v1.0 0
Piloderma_croceum_F_1598_v1.0 0
Hydnomerulius_pinastri_v2.0 0
Pisolithus_microcarpus_441_v1.0 0
Coprinopsis_cinerea_okayama7_130_v3 0
Amanita_thiersii_Skay4041_v1.0 0
Galerina_marginata_v1.0 1
Postia_placenta_ 0
Dichomitus_squalens 0
Tremella_mesenterica_   (Witches' butter)   0
Apiospora_montagnei_NRRL_25634_v1.0 0
Magnaporthe_grisea_70-15_ 0
Podospora_anserina_ 0
Thielavia_terrestris_NRRL_8126_ 0
Chaetomium_globosum_CBS_148.51_ 0
Neurospora_tetrasperma_ 0
Neurospora_discreta_FGSC_8579_ 0
Cryphonectria_parasitica_   (Chestnut blight fungus)   1
Verticillium_albo-atrum_VaMs.102_ 0
Acremonium_alcalophilumv_1.0 0
Glomerella_graminicola_22 0
Fusarium_graminearum_ 0
Nectria_haematococca_mpVI_ 0
Fusarium_oxysporum_f._sp._lycopersici_4286_ 0
Fusarium_verticillioides_7600_ 1
Trichoderma_atroviride_ 0
Trichoderma_citrinoviride_v1.0 0
Trichoderma_reesei_1.2 1
Trichoderma_virens_Gv29-8_ 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 0
Trichoderma_harzianum_CBS_226.95_v1.0 0
Botrytis_cinerea_B05.10_ 0
Blumeria_graminis_22 0
Zasmidium_cellare_ATCC_36951_v1.0 1
Dothistroma_septosporum 0
Mycosphaerella_fijiensis_CIRAD86_ 0
Trichophyton_tonsurans_CBS_112818_ 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 1
Penicillium_chrysogenum_v1.0 1
Aspergillus_acidus_v1.0 0
Aspergillus_brasiliensis_v1.0 0
Aspergillus_sydowii_v1.0 1
Aspergillus_versicolor_v1.0 1
Aspergillus_terreus_NIH2624_ 0
Aspergillus_tubingensis_v1.0 0
Aspergillus_oryzae_RIB40_ 1
Aspergillus_niger_22 0
Aspergillus_flavus_NRRL3357_ 1
Penicillium_marneffei_ATCC_18224_ 3
Tuber_melanosporum_Vittad_   (Perigord truffle)   1
Saccharomyces_paradoxus_MIT 0
Catenaria_anguillulae_PL171_v1.0 0
Allomyces_macrogynus_ATCC_38327_ 0
Dictyostelium_discoideum 0
Dictyostelium_purpureum_ 0
Pinus_taeda   (Loblolly pine)   0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Arabidopsis_thaliana_10   (Thale cress)   0
Malus_domestica_v196   (Apple)   0
Populus_trichocarpa_v156   (Black cottonwood)   0
Vitis_vinifera_   (Wine grape)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   0
Solanum_tuberosum_   (Potato)   0
Actinidia_chinensis_Hongyang_ 0
Aquilegia_coerulea_v195 1
Aegilops_tauschii_22 0
Oryza_meridionalis_22 0
Oryza_glumaepatula_22 0
Zea_mays_subsp._mays_   (Maize)   0
Zea_mays_v181   (Maize)   0
Musa_balbisiana   (Balbis banana)   0
Musa_acuminata_22   (Wild Malaysian banana)   0
Chlamydomonas_reinhardtii_4.0 0
Ostreococcus_sp._RCC809_ 1
Porphyridium_purpureum_02_2012 0
Thecamonas_trahens_ATCC_50062_ 0
Bigelowiella_natans_CCMP2755_22 0
Cyanophora_paradoxa_ 0
Trypanosoma_cruzi_strain_CL_Brener 0
Aureococcus_anophagefferens_ 0
Pythium_iwayamai_DAOM_BR242034_22 1
Pythium_arrhenomanes_ATCC_12531_22 0
Pythium_irregulare_DAOM_BR486_22 1
Pythium_vexans_DAOM_BR484_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   2
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 1
Fragilariopsis_cylindrus 2
Thalassiosira_pseudonana_CCMP1335 1
Paramecium_tetraurelia_ 1
Tetrahymena_thermophila_SB210_1_ 0
Ichthyophthirius_multifiliis_strain_G5_ 0
Plasmodium_falciparum_3D7_ 0
Plasmodium_knowlesi_strain_H_ 0
Plasmodium_chabaudi_ 0
Plasmodium_berghei_ANKA_ 0
Symbiodinium_minutum_clade_B1_v1.2 0
Naegleria_gruberi_ 1
Guillardia_theta_CCMP2712_v1.0_ 0
Emiliania_huxleyi_CCMP1516_ 1
Rhodococcus_opacus_B4 0
Mycobacterium_sp._JLS 0
Mycobacterium_vanbaalenii_PYR-1 0
Mycobacterium_rhodesiae_NBB3 0
Chloroflexus_aggregans_DSM_9485 0
Clostridium_sp._BNL1100 1
Paenibacillus_sp._JDR-2 0
Haliscomenobacter_hydrossis_DSM_1100 1
Owenweeksia_hongkongensis_DSM_17368 1
Geobacter_daltonii_FRC-32 0
Haliangium_ochraceum_DSM_14365 0
Sorangium_cellulosum_'So_ce_56' 0
Corallococcus_coralloides_DSM_2259 0
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 1
Cupriavidus_necator_N-1 0
Acidovorax_avenae_subsp._avenae_ATCC_19860 0
Hahella_chejuensis_KCTC_2396 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   1
Saccharomyces_cerevisiae_PW5 0
Saccharomyces_cerevisiae_CLIB215 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Plasmodium_falciparum_HB3_ 0
Plasmodium_falciparum_Dd2_ 0
Actinoplanes_friuliensis_DSM_7358 0
Mycobacterium_intracellulare_MOTT-64 0
Mycobacterium_indicus_pranii_MTCC_9506 0
Mycobacterium_intracellulare_MOTT-02 0
Sorangium_cellulosum_So0157-2 1
Myxococcus_stipitatus_DSM_14675 0

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Pongo_abelii_69_2   (Sumatran orangutan)   2
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Macaca_mulatta_69_1   (Rhesus monkey)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_69_3   (Small-eared galago)   1
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   0
Vicugna_pacos_69_1   (Alpaca)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Equus_caballus_69_2   (Horse)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Pteropus_vampyrus_69_1   (Large flying fox)   2
Sorex_araneus_69_1   (European shrew)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Loxodonta_africana_69_3   (African savanna elephant)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_69_5   (Platypus)   0
Meleagris_gallopavo_69_2   (Turkey)   0
Gallus_gallus_69_2   (Chicken)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Anolis_carolinensis_69_2.0   (Green anole)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   2
Latimeria_chalumnae_69_1   (Coelacanth)   2
Takifugu_rubripes_69_4   (Torafugu)   2
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   2
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   2
Oreochromis_niloticus_69_1.0   (Nile tilapia)   3
Drosophila_melanogaster_69_5   (Fruit fly)   1

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   4
Homo_sapiens__(NCBI_version)   (Human)   1
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
Malus_x_domestica_(Duplicate)   (Apple)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
Protozoadb_2010_08_(Protozoadb) 0
Protein_Data_Bank_(all_PDB_sequenc) 2
STRING_v9.0.5_(STRING) 27
NCBI_2017_08_genome 443
Uniprot_2018_03_genome 1431
NCBI_viral_sequences_(Viral) 0
TargetDB__(Targets) 2

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