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Domain combinations for 117839,_gap_,56399 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

117839 - WWE domain
56399 - ADP-ribosylation

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Ochotona_princeps_76   (American pika)   0
Sorex_araneus_76_1   (European shrew)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   0
Saccoglossus_kowalevskii_v3.0 1
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_76_2.0   (Green anole)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_76_1   (Coelacanth)   0
Lepisosteus_oculatus_76   (Spotted gar)   0
Gadus_morhua_76_1   (Atlantic cod)   1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Oryzias_latipes_76_1   (Japanese medaka)   1
Poecilia_formosa_76   (Amazon molly)   0
Astyanax_mexicanus_76   (Mexican tetra)   0
Danio_rerio_76_9   (Zebrafish)   0
Adineta_vaga 13
Crassostrea_gigas_22   (Pacific oyster)   0
Acropora_digitifera_v1.0 2
Amphimedon_queenslandica 5
Proterospongia_sp._ATCC_50818_ 0
Capsaspora_owczarzaki_ATCC_30864_ 0
Dictyostelium_discoideum 0
Dictyostelium_purpureum_ 0
Pinus_taeda   (Loblolly pine)   0
Picea_abies   (Norway spruce)   0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 2
Medicago_truncatula_   (Barrel medic)   0
Cucumis_sativus_v122   (Cucumber)   0
Manihot_esculenta_v147   (Cassava)   0
Populus_trichocarpa_v156   (Black cottonwood)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   1
Solanum_lycopersicum_v.2.3   (Tomato)   0
Solanum_tuberosum_   (Potato)   0
Actinidia_chinensis_Hongyang_ 0
Triticum_urartu_22 0
Triticum_aestivum_22   (Bread wheat)   0
Musa_balbisiana   (Balbis banana)   1
Musa_acuminata_22   (Wild Malaysian banana)   0
Amborella_trichopoda_22 0
Bigelowiella_natans_CCMP2755_22 0
Aureococcus_anophagefferens_ 0
Perkinsus_marinus_ATCC_50983_ 0
Symbiodinium_minutum_clade_B1_v1.2 0
Naegleria_gruberi_ 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0

Longest transcript per gene
Genome     Number
Ochotona_princeps_69   (American pika)   0
Felis_catus_69   (Domestic cat)   0
Sorex_araneus_69_1   (European shrew)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   0
Gallus_gallus_69_2   (Chicken)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_69_2.0   (Green anole)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_69_1   (Coelacanth)   0
Gadus_morhua_69_1   (Atlantic cod)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Oryzias_latipes_69_1   (Japanese medaka)   1
Danio_rerio_69_9   (Zebrafish)   0

Others
Genome     Number
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
STRING_v9.0.5_(STRING) 3
Uniprot_2018_03_genome 120
NCBI_2017_08_genome 12

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