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Domain combinations for 143503,_gap_,90209,90209,_gap_,57850,57850,57850,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

143503 - PUG domain-like
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like
57850 - RING/U-box
57850 - RING/U-box
57850 - RING/U-box

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Mus_musculus_76_38   (House mouse)   2
Gadus_morhua_76_1   (Atlantic cod)   1
Takifugu_rubripes_76_4   (Torafugu)   1
Oryzias_latipes_76_1   (Japanese medaka)   1

Longest transcript per gene
Genome     Number
Mus_musculus_69_38   (House mouse)   1
Gadus_morhua_69_1   (Atlantic cod)   1
Oryzias_latipes_69_1   (Japanese medaka)   1

Others
Genome     Number
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
STRING_v9.0.5_(STRING) 3
Uniprot_2018_03_genome 273
NCBI_2017_08_genome 17

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