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Home > SCOP hierarchy > Domain combination - 46938,52087,_gap_

Domain combinations for 46938,52087,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

46938 - CRAL/TRIO N-terminal domain
52087 - CRAL/TRIO domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 3

Pan_troglodytes_76_2.1.4 (Chimpanzee) 2

Gorilla_gorilla_76_3.1 (Western gorilla) 2

Pongo_abelii_76_2 (Sumatran orangutan) 2

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 2

Papio_anubis_76 (Olive baboon) 2

Macaca_mulatta_76_1 (Rhesus monkey) 2

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 2

Otolemur_garnettii_76_3 (Small-eared galago) 2

Microcebus_murinus_76_1 (Gray mouse lemur) 0

Rattus_norvegicus_76_5.0 (Norway rat) 2

Mus_musculus_76_38 (House mouse) 3

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 2

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 2

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 1

Cavia_porcellus_76_3 (Domestic guinea pig) 2

Oryctolagus_cuniculus_76_2 (Rabbit) 2

Ochotona_princeps_76 (American pika) 2

Tupaia_belangeri_76 (Northern tree shrew) 1

Sus_scrofa_76_10.2 (Pig) 2

Bos_taurus_76_3.1 (Cattle) 1

Ovis_aries_76_3.1 (Sheep) 3

Vicugna_pacos_76_1 (Alpaca) 2

Tursiops_truncatus_76_1 (Bottlenose dolphin) 1

Mustela_putorius_furo_76_1.0 (Domestic ferret) 2

Ailuropoda_melanoleuca_76_1 (Giant panda) 2

Canis_familiaris_76_3.1 (Dog) 2

Felis_catus_76_6.2 (Domestic cat) 2

Equus_caballus_76_2 (Horse) 2

Myotis_lucifugus_76_2.0 (Little brown bat) 2

Pteropus_vampyrus_76_1 (Large flying fox) 1

Sorex_araneus_76_1 (European shrew) 2

Erinaceus_europaeus_76 (Western European hedgehog) 1

Procavia_capensis_76_1 (Cape rock hyrax) 1

Loxodonta_africana_76_3 (African savanna elephant) 2

Echinops_telfairi_76 (Small Madagascar hedgehog) 0

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 2

Choloepus_hoffmanni_76_1 (Hoffmann's two-fingered sloth) 1

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 1

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 2

Saccoglossus_kowalevskii_v3.0 1

Petromyzon_marinus_76_7.0 (Sea lamprey) 0

Meleagris_gallopavo_76_2 (Turkey) 2

Gallus_gallus_76_4 (Chicken) 2

Anas_platyrhynchos_76_1.0 (Mallard) 2

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 2

Ficedula_albicollis_76_1.0 (Collared flycatcher) 2

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 1

Anolis_carolinensis_76_2.0 (Green anole) 2

Xenopus_laevis_ (African clawed frog) 5

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 2

Latimeria_chalumnae_76_1 (Coelacanth) 1

Lepisosteus_oculatus_76 (Spotted gar) 2

Gadus_morhua_76_1 (Atlantic cod) 1

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 2

Takifugu_rubripes_76_4 (Torafugu) 2

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 1

Oryzias_latipes_76_1 (Japanese medaka) 1

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 1

Poecilia_formosa_76 (Amazon molly) 2

Oreochromis_niloticus_76_1.0 (Nile tilapia) 3

Astyanax_mexicanus_76 (Mexican tetra) 1

Danio_rerio_76_9 (Zebrafish) 1

Oikopleura_dioica 1

Ciona_savignyi_76_2.0 (Pacific transparent sea squirt) 0

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 0

Adineta_vaga 12

Octopus_bimaculoides_280 0

Crassostrea_gigas_22 (Pacific oyster) 1

Lottia_gigantea_ (Owl limpet) 1

Helobdella_robusta_ 3

Capitella_sp._I_ 0

Danaus_plexippus_OGS1.0 (Monarch butterfly) 4

Heliconius_melpomene_ (Postman butterfly) 1

Bombyx_mori_ (Domestic silkworm) 1

Nasonia_vitripennis_ (Jewel wasp) 2

Apis_mellifera_38.2d_(Not_maintained) (Honey bee) 2

Harpegnathos_saltator_v3.3 (Jerdon's jumping ant) 2

Linepithema_humile_v1.1 (Argentine ant) 2

Pogonomyrmex_barbatus_v1.2 (Red harvester ant) 1

Solenopsis_invicta_v.2.2.3 (Red fire ant) 1

Acromyrmex_echinatior_v3.8 (Panamanian leafcutter ant) 2

Atta_cephalotes_v1.1 2

Camponotus_floridanus_v3.3 (Florida carpenter ant) 2

Lucilia_cuprina (Australian sheep blowfly) 1

Drosophila_grimshawi_1.3 1

Drosophila_willistoni_1.3 1

Drosophila_pseudoobscura_2.13 1

Drosophila_persimilis_1.3 1

Drosophila_suzukii 1

Drosophila_yakuba_1.3 1

Drosophila_sechellia_1.3 1

Drosophila_melanogaster_76_5 (Fruit fly) 1

Drosophila_erecta_1.3 1

Drosophila_ananassae_1.3 1

Drosophila_virilis_1.2 1

Drosophila_mojavensis_1.3 2

Aedes_aegypti_55_(Not_maintained) (Yellow fever mosquito) 5

Culex_pipiens_quinquefasciatus_ (Southern house mosquito) 8

Anopheles_darlingi_22 (American malaria mosquito) 6

Anopheles_gambiae_49_3j (African malaria mosquito) 3

Tribolium_castaneum_3.0 (Red flour beetle) 2

Pediculus_humanus_corporis__(Early_assembly) (Human body louse) 1

Acyrthosiphon_pisum_ (Pea aphid) 0

Rhodnius_prolixus_22 1

Daphnia_pulex_ (Common water flea) 0

Strigamia_maritima_22 0

Sarcoptes_scabiei 0

Tetranychus_urticae_ (Two-spotted spider mite) 4

Ixodes_scapularis__(Preliminary) (Black-legged tick) 0

Pristionchus_pacificus_ 1

Meloidogyne_incognita_ (Southern root-knot nematode) 0

Meloidogyne_hapla_ 0

Brugia_malayi_WS250 (Agent of lymphatic filariasis) 0

Caenorhabditis_japonica_ 3

Caenorhabditis_brenneri_ 2

Caenorhabditis_remanei_ 2

Caenorhabditis_elegans_76_235 (Roundworm) 2

Caenorhabditis_briggsae_2 2

Hymenolepis_microstoma_ 1

Echinococcus_multilocularis_ 6

Echinococcus_granulosus_ 6

Taenia_solium_ (Pork tapeworm) 4

Schistosoma_mansoni_ 2

Mnemiopsis_leidyi (Sea walnut) 0

Nematostella_vectensis_1.0 (Starlet sea anemone) 0

Hydra_vulgaris 1

Amphimedon_queenslandica 0

Proterospongia_sp._ATCC_50818_ 3

Monosiga_brevicollis_ 3

Capsaspora_owczarzaki_ATCC_30864_ 1

Conidiobolus_coronatus_NRRL28638_v1.0 4

Mortierella_verticillata_NRRL_6337_ 2

Phycomyces_blakesleeanus_ 5

Rhizopus_oryzae_RA_99-880_ 1

Mucor_circinelloides_ 1

Rhizomucor_miehei_CAU432_ 2

Malassezia_globosa_CBS_7966_ 4

Sporisorium_reilianum_22 1

Ustilago_maydis_ 0

Mixia_osmundae_IAM_14324_v1.0 3

Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 5

Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 4

Melampsora_laricis-populina_ 5

Rhodotorula_graminis_WP1_v1.0 2

Sporobolomyces_roseus_IAM_13481_ 1

Microbotryum_violaceum_22 4

Sphaerobolus_stellatus_v1.0 3

Piloderma_croceum_F_1598_v1.0 3

Serpula_lacrymans_var._lacrymans_S7.9_ 3

Coniophora_puteana 4

Hydnomerulius_pinastri_v2.0 2

Paxillus_rubicundulus_Ve08.2h10_v1.0 2

Pisolithus_microcarpus_441_v1.0 2

Pisolithus_tinctorius_Marx_270_v1.0 1

Coprinopsis_cinerea_okayama7_130_v3 3

Amanita_thiersii_Skay4041_v1.0 2

Amanita_muscaria_Koide_v1.0 (Fly agaric) 3

Galerina_marginata_v1.0 2

Hebeloma_cylindrosporum_h7_v2.0 2

Laccaria_bicolor_S238N-H82_ 1

Agaricus_bisporus_var._bisporus_ 1

Schizophyllum_commune_ 2

Stereum_hirsutum_FP-91666_SS1__v1.0 2

Heterobasidion_annosum_ 3

Gloeophyllum_trabeumv1.0 1

Punctularia_strigosozonata_v1.0 2

Sebacina_vermifera_MAFF_305830_v1.0 1

Fomitiporia_mediterranea_v1.0 4

Tulasnella_calospora_AL13/4D_v1.0 1

Postia_placenta_ 1

Wolfiporia_cocos_MD-104_SS10__v1.0 3

Fomitopsis_pinicolav1.0 3

Fomitopsis_pinicola_FP-58527_SS1_v3.0 3

Phanerochaete_chrysosporium_RP-78_2.1 0

Dichomitus_squalens 2

Trametes_versicolor_v1.0 2

Tremella_mesenterica_ (Witches' butter) 2

Daldinia_eschscholzii_EC12_v1.0 3

Apiospora_montagnei_NRRL_25634_v1.0 3

Magnaporthe_poae_ATCC_64411_22 1

Magnaporthe_grisea_70-15_ 3

Podospora_anserina_ 3

Sporotrichum_thermophile_ATCC_42464_ 2

Thielavia_terrestris_NRRL_8126_ 3

Chaetomium_globosum_CBS_148.51_ 2

Neurospora_tetrasperma_ 3

Neurospora_discreta_FGSC_8579_ 3

Neurospora_crassa_OR74A_ 3

Cryphonectria_parasitica_ (Chestnut blight fungus) 3

Verticillium_albo-atrum_VaMs.102_ 2

Verticillium_dahliae_VdLs.17_ 4

Acremonium_alcalophilumv_1.0 3

Glomerella_graminicola_22 2

Fusarium_graminearum_ 3

Nectria_haematococca_mpVI_ 3

Fusarium_oxysporum_f._sp._lycopersici_4286_ 4

Fusarium_verticillioides_7600_ 4

Trichoderma_asperellum_CBS_433.97_v1.0 3

Trichoderma_atroviride_ 2

Trichoderma_citrinoviride_v1.0 2

Trichoderma_reesei_1.2 2

Trichoderma_virens_Gv29-8_ 3

Trichoderma_longibrachiatum_ATCC_18648_v1.0 3

Trichoderma_harzianum_CBS_226.95_v1.0 3

Amorphotheca_resinae_v1.0 (Creosote fungus) 2

Botrytis_cinerea_B05.10_ 0

Sclerotinia_sclerotiorum_ 1

Blumeria_graminis_22 1

Didymella_exigua_CBS_183.55_v1.0 3

Leptosphaeria_maculans_22 2

Setosphaeria_turcica_v1.0 3

Cochliobolus_miyabeanus_ATCC_44560_v1.0 3

Cochliobolus_victoriae_FI3_v1.0 3

Cochliobolus_carbonum_26-R-13_v1.0 3

Cochliobolus_heterostrophus_ (Southern corn leaf blight pathogen) 3

Alternaria_brassicicola_ 3

Cochliobolus_lunatus_m118_v2.0 3

Pyrenophora_teres_f._teres_22 3

Pyrenophora_tritici-repentis_ 3

Stagonospora_nodorum_ 3

Mycosphaerella_graminicola_IPO323_ 1

Zasmidium_cellare_ATCC_36951_v1.0 5

Dothistroma_septosporum 2

Septoria_musiva_v1.0 2

Mycosphaerella_fijiensis_CIRAD86_ 2

Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2

Paracoccidioides_brasiliensis_Pb18_ 1

Coccidioides_posadasii_RMSCC_3488_ 1

Coccidioides_immitis_RS_ 1

Ajellomyces_dermatitidis_SLH14081_ 1

Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0

Microsporum_canis_CBS_113480_ 2

Trichophyton_equinum_CBS_127.97_ 3

Trichophyton_verrucosum_HKI_0517_ 3

Arthroderma_benhamiae_CBS_112371_ 3

Trichophyton_tonsurans_CBS_112818_ 3

Trichophyton_rubrum_CBS_118892_ 3

Uncinocarpus_reesii_1704_ 1

Aspergillus_zonatus_v1.0 1

Penicillium_chrysogenum_Wisconsin_54-1255_ 1

Penicillium_chrysogenum_v1.0 1

Aspergillus_acidus_v1.0 1

Aspergillus_fumigatus_Af293 0

Aspergillus_brasiliensis_v1.0 3

Aspergillus_nidulans_FGSC_A4_ 0

Aspergillus_sydowii_v1.0 1

Aspergillus_versicolor_v1.0 1

Aspergillus_glaucus 1

Aspergillus_carbonarius_ITEM_5010_ 2

Neosartorya_fischeri_NRRL_181_ 1

Aspergillus_terreus_NIH2624_ 1

Aspergillus_tubingensis_v1.0 1

Aspergillus_wentii_v1.0 2

Aspergillus_oryzae_RIB40_ 1

Aspergillus_niger_22 1

Aspergillus_niger_ATCC_1015_ 1

Aspergillus_flavus_NRRL3357_ 1

Aspergillus_clavatus_NRRL_1_ 0

Penicillium_marneffei_ATCC_18224_ 0

Tuber_melanosporum_Mel28_22 1

Tuber_melanosporum_Vittad_ (Perigord truffle) 1

Hansenula_polymorpha_v2.0 1

Dekkera_bruxellensis_CBS_2499_v2.0 1

Pichia_membranifaciensv1.0 1

Babjeviella_inositovora_NRRL_Y-12698_v1.0 1

Candida_guilliermondii_ATCC_6260_ 0

Hyphopichia_burtonii_NRRL_Y-1933_v1.0 0

Wickerhamomyces_anomalus 1

Pichia_pastoris_GS115_ 0

Yarrowia_lipolytica_CLIB122 2

Vanderwaltozyma_polyspora_DSM_70294_ 0

Candida_glabrata_CBS138 0

Kluyveromyces_thermotolerans_CBS_6340 0

Schizosaccharomyces_cryophilus_OY26_22 2

Schizosaccharomyces_octosporus_yFS286_ 2

Schizosaccharomyces_japonicus_yFS275_ 1

Schizosaccharomyces_pombe (Fission yeast) 2

Allomyces_macrogynus_ATCC_38327_ 3

Spizellomyces_punctatus_DAOM_BR117_ 3

Dictyostelium_discoideum 1

Dictyostelium_purpureum_ 1

Selaginella_moellendorffii_ 4

Pinus_taeda (Loblolly pine) 2

Picea_abies (Norway spruce) 0

Eucalyptus_grandis_v201 (Rose gum) 8

Theobroma_cacao_B97-61/B2_v1 (Cacao) 5

Gossypium_raimondii_v221 25

Citrus_clementina_v165 6

Citrus_sinensis_v154 (Sweet orange) 11

Thellungiella_halophila_v173 8

Brassica_rapa_Chiifu-401_1.2 (Field mustard) 15

Capsella_rubella_v183 7

Arabidopsis_lyrata_ (Lyrate rockcress) 8

Arabidopsis_thaliana_10 (Thale cress) 10

Carica_papaya_ (Papaya) 5

Medicago_truncatula_ (Barrel medic) 12

Phaseolus_vulgaris_v186 (French bean) 14

Glycine_max_v109 (Soybean) 24

Cucumis_sativus_v122 (Cucumber) 10

Fragaria_vesca_ (Wild strawberry) 2

Malus_domestica_v196 (Apple) 6

Prunus_persica_v139 (Peach) 10

Linum_usitatissimum_v200 (Flax) 9

Manihot_esculenta_v147 (Cassava) 9

Populus_trichocarpa_v156 (Black cottonwood) 15

Vitis_vinifera_ (Wine grape) 5

Mimulus_guttatus_v140 (Spotted monkey flower) 9

Solanum_lycopersicum_v.2.3 (Tomato) 4

Solanum_tuberosum_ (Potato) 8

Actinidia_chinensis_Hongyang_ 4

Aquilegia_coerulea_v195 10

Triticum_urartu_22 4

Triticum_aestivum_22 (Bread wheat) 16

Aegilops_tauschii_22 4

Brachypodium_distachyon_ (Stiff brome) 8

Oryza_barthii_22 (African wild rice) 8

Oryza_meridionalis_22 11

Oryza_glumaepatula_22 11

Oryza_glaberrima (African rice) 6

Oryza_punctata_22 8

Oryza_nivara_22 8

Oryza_brachyantha_22 (Malo sina) 6

Oryza_sativa_ssp._japonica_5.0 (Japanese rice) 9

Oryza_sativa_v193 (Rice) 10

Phyllostachys_heterocyclavar._pubescens (Kikko-chiku) 12

Panicum_virgatum_v202 (Switchgrass) 10

Setaria_italica_v164 (Foxtail millet) 9

Zea_mays_subsp._mays_ (Maize) 6

Zea_mays_v181 (Maize) 6

Sorghum_bicolor_ (Sorghum) 7

Musa_balbisiana (Balbis banana) 11

Musa_acuminata_22 (Wild Malaysian banana) 17

Amborella_trichopoda_22 4

Physcomitrella_patens 4

Coccomyxa_subellipsoidea_sp._C-169_v2 1

Asterochloris_sp._Cgr/DA1pho_v1.0 2

Chlorella_variabilis_sp._NC64A_ 0

Chlorella_vulgaris_ 1

Volvox_carteri_f._nagariensis_ 2

Volvox_carteri_v199 5

Chlamydomonas_reinhardtii_4.0 7

Ostreococcus_sp._RCC809_ 2

Ostreococcus_lucimarinus_CCE9901_ 2

Ostreococcus_tauri_ 1

Bathycoccus_prasinos_ 1

Micromonas_sp._RCC299_ 1

Cyanidioschyzon_merolae_strain_10D_22 2

Cyanidioschyzon_merolae 2

Porphyridium_purpureum_02_2012 1

Thecamonas_trahens_ATCC_50062_ 2

Bigelowiella_natans_CCMP2755_22 4

Leishmania_mexicana_2.4 2

Leishmania_major_strain_Friedlin_ 1

Leishmania_infantum_JPCM5_2.4 2

Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1

Trypanosoma_cruzi_strain_CL_Brener 1

Ectocarpus_siliculosus 1

Albugo_laibachii_22 0

Pythium_iwayamai_DAOM_BR242034_22 0

Pythium_ultimum_v1.7-2 0

Pythium_aphanidermatum_DAOM_BR444_22 1

Pythium_irregulare_DAOM_BR486_22 0

Pythium_vexans_DAOM_BR484_22 0

Phytophthora_sojae_1.1 0

Phytophthora_infestans_T30-4_ 0

Phytophthora_capsici_ 1

Hyaloperonospora_arabidopsidis_22 0

Phaeodactylum_tricornutumCCAP_1055/1 0

Fragilariopsis_cylindrus 0

Thalassiosira_pseudonana_CCMP1335 1

Perkinsus_marinus_ATCC_50983_ 2

Paramecium_tetraurelia_ 17

Tetrahymena_thermophila_SB210_1_ 8

Ichthyophthirius_multifiliis_strain_G5_ 1

Cryptosporidium_hominis 0

Cryptosporidium_muris 0

Cryptosporidium_parvum_Iowa_II 0

Neospora_caninum 0

Toxoplasma_gondii_VEG 0

Toxoplasma_gondii_ME49 0

Toxoplasma_gondii_GT1 1

Theileria_parva__ 0

Theileria_annulata 1

Plasmodium_chabaudi_ 0

Plasmodium_berghei_ANKA_ 0

Symbiodinium_minutum_clade_B1_v1.2 3

Naegleria_gruberi_ 1

Guillardia_theta_CCMP2712_v1.0_ 2

Emiliania_huxleyi_CCMP1516_ 5

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Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 1

Drosophila_melanogaster_FlyBase_5.12_(FlyBase) (Fruit fly) 1

Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase) (African malaria mosquito) 5

Ascaris_suum_Victoria/Ghent_ (Pig roundworm) 1

Caenorhabditis_elegans_WormBase_WS218__(WormBase) (Roundworm) 2

Cryptococcus_neoformans_var._grubii_H99_ 1

Cryptococcus_neoformans_B-3501A_ 0

Paracoccidioides_brasiliensis_Pb01_ 1

Paracoccidioides_brasiliensis_Pb03_ 1

Coccidioides_posadasii_str._Silveira_ 2

Coccidioides_immitis_RMSCC_3703_ 1

Coccidioides_immitis_RMSCC_2394_ 1

Coccidioides_immitis_H538.4_ 1

Ajellomyces_dermatitidis_ER-3_ 1

Histoplasma_capsulatum_H143 0

Histoplasma_capsulatum_H88 1

Histoplasma_capsulatum_G186AR 1

Aspergillus_fumigatus_A1163_ 0

Schizosaccharomyces_pombe_972h-_ 2

Batrachochytrium_dendrobatidis_JAM81_ 5

Theobroma_cacao_Matina_1-6_v0.9 (Cacao) 5

Hordeum_vulgare_22 (Domesticated barley) 10

Oryza_sativa_ssp._Indica_(Subspecies) (Long-grained rice) 8

Neospora_caninum_Nc-Liverpool_6.2 0

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Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 2

Pan_troglodytes_69_2.1.4 (Chimpanzee) 2

Gorilla_gorilla_69_3.1 (Western gorilla) 2

Pongo_abelii_69_2 (Sumatran orangutan) 2

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 2

Macaca_mulatta_69_1 (Rhesus monkey) 2

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 2

Otolemur_garnettii_69_3 (Small-eared galago) 2

Microcebus_murinus_69_1 (Gray mouse lemur) 0

Rattus_norvegicus_69_3.4 (Norway rat) 2

Mus_musculus_69_38 (House mouse) 2

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 2

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 2

Cavia_porcellus_69_3 (Domestic guinea pig) 2

Oryctolagus_cuniculus_69_2 (Rabbit) 3

Ochotona_princeps_69 (American pika) 2

Tupaia_belangeri_69 (Northern tree shrew) 1

Sus_scrofa_69_10.2 (Pig) 2

Bos_taurus_69_3.1 (Cattle) 1

Vicugna_pacos_69_1 (Alpaca) 2

Tursiops_truncatus_69_1 (Bottlenose dolphin) 1

Mustela_putorius_furo_69_1.0 (Domestic ferret) 2

Ailuropoda_melanoleuca_69_1 (Giant panda) 2

Canis_familiaris_69_3.1 (Dog) 2

Felis_catus_69 (Domestic cat) 1

Equus_caballus_69_2 (Horse) 2

Myotis_lucifugus_69_2.0 (Little brown bat) 2

Pteropus_vampyrus_69_1 (Large flying fox) 1

Sorex_araneus_69_1 (European shrew) 2

Erinaceus_europaeus_69 (Western European hedgehog) 1

Procavia_capensis_69_1 (Cape rock hyrax) 1

Loxodonta_africana_69_3 (African savanna elephant) 2

Echinops_telfairi_69 (Small Madagascar hedgehog) 0

Dasypus_novemcinctus_69_2 (Nine-banded armadillo) 0

Choloepus_hoffmanni_69_1 (Hoffmann's two-fingered sloth) 1

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 1

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 2

Petromyzon_marinus_69_7.0 (Sea lamprey) 0

Meleagris_gallopavo_69_2 (Turkey) 2

Gallus_gallus_69_2 (Chicken) 2

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 2

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 1

Anolis_carolinensis_69_2.0 (Green anole) 1

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 2

Latimeria_chalumnae_69_1 (Coelacanth) 1

Gadus_morhua_69_1 (Atlantic cod) 1

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 2

Takifugu_rubripes_69_4 (Torafugu) 2

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 1

Oryzias_latipes_69_1 (Japanese medaka) 1

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 2

Danio_rerio_69_9 (Zebrafish) 1

Drosophila_melanogaster_69_5 (Fruit fly) 1

Caenorhabditis_elegans_69_215 (Roundworm) 2

Arabidopsis_thaliana_10 (Thale cress) 7

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 3

Homo_sapiens__(NCBI_version) (Human) 2

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 2

Brugia_malayi_v1.0_(Duplicate) (Agent of lymphatic filariasis) 0

Picea_sitchensis__(Incomplete) (Sitka spruce) 1

Lotus_japonicus__(Early_assembly) 6

Malus_x_domestica_(Duplicate) (Apple) 6

Ricinus_communis__(Early_assembly) (Castor bean) 3

Nicotiana_benthamiana_0.4.4_(Early_draft) 11

Solanum_pimpinellifolium_A-1.0_(Early_draft) (Currant tomato) 4

Solanum_lycopersicum_v2.3_(Early_assembly) (Tomato) 4

Phoenix_dactylifera__(Early_draft) (Date palm) 1

TargetDB__(Targets) 2

STRING_v9.0.5_(STRING) 198

NCBI_2017_08_genome 2337

Uniprot_2018_03_genome 17262

Protozoadb_2010_08_(Protozoadb) 8

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Domain combinations for 46938,52087,_gap_ superfamilies in groups of genomes