SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 47226,_gap_,47384,_gap_,55874,50341,_gap_,52172 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47226 - Histidine-containing phosphotransfer domain, HPT domain
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
50341 - CheW-like
52172 - CheY-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Leptolyngbya_sp._PCC_7376 1
Pseudanabaena_sp._PCC_7367 2
Acaryochloris_marina_MBIC11017 2
Synechocystis_sp._PCC_6803 0
Synechococcus_sp._PCC_7502 1
Synechococcus_sp._PCC_6312 2
Microcoleus_sp._PCC_7113 5
Geitlerinema_sp._PCC_7407 1
Cyanothece_sp._PCC_8802 1
Gloeocapsa_sp._PCC_7428 1
Halothece_sp._PCC_7418 1
Rivularia_sp._PCC_7116 2
Calothrix_sp._PCC_7507 2
Anabaena_variabilis_ATCC_29413 2
'Nostoc_azollae'_0708 1
Nostoc_sp._PCC_7107 1
Nostoc_punctiforme_PCC_73102 2
Nostoc_sp._PCC_7120 2
Nostoc_sp._PCC_7524 1
Anabaena_sp._90 1
Isosphaera_pallida_ATCC_43644 0
Flexistipes_sinusarabici_DSM_4947 1
Halothiobacillus_neapolitanus_c2 0
Alkalilimnicola_ehrlichii_MLHE-1 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Chroococcidiopsis_thermalis_PCC_7203 3
Chamaesiphon_minutus_PCC_6605 1
Synechocystis_sp._PCC_6803_substr._PCC-P 0
Synechocystis_sp._PCC_6803_substr._PCC-N 0
Synechocystis_sp._PCC_6803_substr._GT-I 0
Synechocystis_sp._PCC_6803 0
Dactylococcopsis_salina_PCC_8305 1
Synechococcus_sp._JA-3-3Ab 1
Synechococcus_sp._PCC_7002 1
Crinalium_epipsammum_PCC_9333 3
Oscillatoria_nigro-viridis_PCC_7112 2
Oscillatoria_acuminata_PCC_6304 2
Cyanothece_sp._PCC_7822 0
Cyanothece_sp._PCC_7425 2
Cyanothece_sp._PCC_7424 1
Cyanothece_sp._ATCC_51142 1
Cyanothece_sp._PCC_8801 1
Cyanobacterium_aponinum_PCC_10605 0
Cyanobacterium_stanieri_PCC_7202 0
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 2
Stanieria_cyanosphaera_PCC_7437 0
Calothrix_parietina_Calothrix_sp._PCC_6303 2
Cylindrospermum_stagnale_PCC_7417 1
Anabaena_cylindrica_PCC_7122 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 1
NCBI_2017_08_genome 264
Uniprot_2018_03_genome 9350
TargetDB__(Targets) 0
STRING_v9.0.5_(STRING) 16

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]