SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 47391,52540,57774,52540 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47391 - Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
52540 - P-loop containing nucleoside triphosphate hydrolases
57774 - Microbial and mitochondrial ADK, insert "zinc finger" domain
52540 - P-loop containing nucleoside triphosphate hydrolases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Saccoglossus_kowalevskii_v3.0 0
Lepisosteus_oculatus_76   (Spotted gar)   1
Astyanax_mexicanus_76   (Mexican tetra)   1
Danio_rerio_76_9   (Zebrafish)   0
Adineta_vaga 2
Crassostrea_gigas_22   (Pacific oyster)   1
Lottia_gigantea_   (Owl limpet)   0
Capitella_sp._I_ 0
Trichoplax_adhaerens_ 0
Monosiga_brevicollis_ 1

Longest transcript per gene
Genome     Number
Danio_rerio_69_9   (Zebrafish)   0

Others
Genome     Number
STRING_v9.0.5_(STRING) 2
Uniprot_2018_03_genome 99
NCBI_2017_08_genome 29

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