Domain combinations for 47576,50044,48065,50729,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47576 - Calponin-homology domain, CH-domain
50044 - SH3-domain
48065 - DBL homology domain (DH-domain)
50729 - PH domain-like

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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• All genomes
• All eukaryote genomes (domain E)
• All bacterial genomes (domain B+A)
• All eubacterial genomes (domain B)
• All archaeal genomes (domain A)

Groups of genomes may be slower than individual genomes.

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Strains

Genome		Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)	(Tropical clawed frog)	1

Longest transcript per gene

Genome		Number
Homo_sapiens_69_37	(Human)	2
Pan_troglodytes_69_2.1.4	(Chimpanzee)	2
Gorilla_gorilla_69_3.1	(Western gorilla)	1
Pongo_abelii_69_2	(Sumatran orangutan)	2
Nomascus_leucogenys_69_1.0	(Northern white-cheeked gibbon)	2
Macaca_mulatta_69_1	(Rhesus monkey)	2
Callithrix_jacchus_69_3.2.1	(White-tufted-ear marmoset)	1
Otolemur_garnettii_69_3	(Small-eared galago)	1
Microcebus_murinus_69_1	(Gray mouse lemur)	1
Rattus_norvegicus_69_3.4	(Norway rat)	2
Mus_musculus_69_38	(House mouse)	2
Dipodomys_ordii_69_1	(Ord's kangaroo rat)	2
Cavia_porcellus_69_3	(Domestic guinea pig)	2
Oryctolagus_cuniculus_69_2	(Rabbit)	1
Ochotona_princeps_69	(American pika)	1
Tupaia_belangeri_69	(Northern tree shrew)	1
Bos_taurus_69_3.1	(Cattle)	2
Vicugna_pacos_69_1	(Alpaca)	1
Tursiops_truncatus_69_1	(Bottlenose dolphin)	2
Mustela_putorius_furo_69_1.0	(Domestic ferret)	1
Ailuropoda_melanoleuca_69_1	(Giant panda)	2
Canis_familiaris_69_3.1	(Dog)	1
Felis_catus_69	(Domestic cat)	1
Equus_caballus_69_2	(Horse)	1
Myotis_lucifugus_69_2.0	(Little brown bat)	1
Pteropus_vampyrus_69_1	(Large flying fox)	2
Sorex_araneus_69_1	(European shrew)	1
Procavia_capensis_69_1	(Cape rock hyrax)	1
Loxodonta_africana_69_3	(African savanna elephant)	2
Echinops_telfairi_69	(Small Madagascar hedgehog)	1
Dasypus_novemcinctus_69_2	(Nine-banded armadillo)	1
Monodelphis_domestica_69_5	(Gray short-tailed opossum)	2
Ornithorhynchus_anatinus_69_5	(Platypus)	1
Meleagris_gallopavo_69_2	(Turkey)	1
Gallus_gallus_69_2	(Chicken)	2
Taeniopygia_guttata_69_3.2.4	(Zebra finch)	2
Pelodiscus_sinensis_69_1.0	(Chinese soft-shelled turtle)	1
Anolis_carolinensis_69_2.0	(Green anole)	2
Xenopus_tropicalis_69_4.2	(Tropical clawed frog)	2
Latimeria_chalumnae_69_1	(Coelacanth)	1
Gadus_morhua_69_1	(Atlantic cod)	3
Tetraodon_nigroviridis_69_8	(Spotted green pufferfish)	2
Takifugu_rubripes_69_4	(Torafugu)	3
Gasterosteus_aculeatus_69_1	(Three-spined stickleback)	3
Oryzias_latipes_69_1	(Japanese medaka)	3
Xiphophorus_maculatus_69_4.4.2	(Southern platyfish)	2
Oreochromis_niloticus_69_1.0	(Nile tilapia)	3
Danio_rerio_69_9	(Zebrafish)	3

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Others

Genome		Number
Homo_sapiens_75_37_(old_version_GRC)	(Human)	5
Homo_sapiens__(NCBI_version)	(Human)	4
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)	(House mouse)	2
TargetDB__(Targets)		5
STRING_v9.0.5_(STRING)		43
Uniprot_2018_03_genome		5160
NCBI_2017_08_genome		923

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