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Home > SCOP hierarchy > Domain combination - 47823,56349

Domain combinations for 47823,56349 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47823 - lambda integrase-like, N-terminal domain
56349 - DNA breaking-rejoining enzymes

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Saccoglossus_kowalevskii_v3.0 26

Anolis_carolinensis_76_2.0 (Green anole) 1

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 2

Oryzias_latipes_76_1 (Japanese medaka) 1

Poecilia_formosa_76 (Amazon molly) 1

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 1

Crassostrea_gigas_22 (Pacific oyster) 1

Lottia_gigantea_ (Owl limpet) 1

Nasonia_vitripennis_ (Jewel wasp) 0

Harpegnathos_saltator_v3.3 (Jerdon's jumping ant) 5

Solenopsis_invicta_v.2.2.3 (Red fire ant) 1

Daphnia_pulex_ (Common water flea) 3

Strigamia_maritima_22 1

Caenorhabditis_japonica_ 2

Acropora_digitifera_v1.0 0

Nematostella_vectensis_1.0 (Starlet sea anemone) 1

Amphimedon_queenslandica 11

Rhizopus_oryzae_RA_99-880_ 1

Sporisorium_reilianum_22 0

Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 2

Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 8

Melampsora_laricis-populina_ 0

Microbotryum_violaceum_22 1

Sphaerobolus_stellatus_v1.0 15

Piloderma_croceum_F_1598_v1.0 2

Serpula_lacrymans_var._lacrymans_S7.9_ 0

Coniophora_puteana 3

Paxillus_rubicundulus_Ve08.2h10_v1.0 4

Pisolithus_microcarpus_441_v1.0 0

Pisolithus_tinctorius_Marx_270_v1.0 2

Scleroderma_citrinum_Foug_A_v1.0 2

Coprinopsis_cinerea_okayama7_130_v3 0

Pleurotus_ostreatus_ (Oyster mushroom) 0

Amanita_muscaria_Koide_v1.0 (Fly agaric) 7

Galerina_marginata_v1.0 1

Hebeloma_cylindrosporum_h7_v2.0 4

Laccaria_bicolor_S238N-H82_ 0

Agaricus_bisporus_var._bisporus_ 6

Stereum_hirsutum_FP-91666_SS1__v1.0 0

Gloeophyllum_trabeumv1.0 0

Punctularia_strigosozonata_v1.0 11

Sebacina_vermifera_MAFF_305830_v1.0 1

Tulasnella_calospora_AL13/4D_v1.0 0

Wolfiporia_cocos_MD-104_SS10__v1.0 1

Fomitopsis_pinicolav1.0 2

Fomitopsis_pinicola_FP-58527_SS1_v3.0 1

Phanerochaete_chrysosporium_RP-78_2.1 0

Trametes_versicolor_v1.0 1

Tuber_melanosporum_Vittad_ (Perigord truffle) 0

Dictyostelium_discoideum 0

Volvox_carteri_f._nagariensis_ 3

Chlamydomonas_reinhardtii_4.0 3

Cyanophora_paradoxa_ 2

Pythium_arrhenomanes_ATCC_12531_22 1

Pythium_vexans_DAOM_BR484_22 0

Phytophthora_sojae_1.1 0

Phytophthora_infestans_T30-4_ 1

Phytophthora_capsici_ 0

Perkinsus_marinus_ATCC_50983_ 1

Symbiodinium_minutum_clade_B1_v1.2 0

Thermobaculum_terrenum_ATCC_BAA-798 1

Leptolyngbya_sp._PCC_7376 1

Pseudanabaena_sp._PCC_7367 1

Acaryochloris_marina_MBIC11017 1

Synechocystis_sp._PCC_6803 1

Synechococcus_elongatus_PCC_7942 1

Nostoc_sp._PCC_7120 3

Cryptobacterium_curtum_DSM_15641 1

Atopobium_parvulum_DSM_20469 1

Ilumatobacter_coccineus 1

Thermobispora_bispora_DSM_43833 1

Nakamurella_multipartita_DSM_44233 3

Modestobacter_marinus 3

Blastococcus_saxobsidens_DD2 2

Geodermatophilus_obscurus_DSM_43160 3

Kineococcus_radiotolerans_SRS30216 2

Catenulispora_acidiphila_DSM_44928 1

Stackebrandtia_nassauensis_DSM_44728 1

Frankia_symbiont_of_Datisca_glomerata 1

Frankia_sp._EAN1pec 2

Frankia_alni_ACN14a 2

Thermobifida_fusca_YX 2

Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 2

Streptosporangium_roseum_DSM_43021 2

Streptomyces_coelicolor_A3(2) 1

Streptomyces_sp._PAMC26508 0

Streptomyces_flavogriseus_ATCC_33331 2

Streptomyces_violaceusniger_Tu_4113 0

Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1

Actinosynnema_mirum_DSM_43827 1

Saccharomonospora_viridis_DSM_43017 1

Pseudonocardia_dioxanivorans_CB1190 3

Saccharopolyspora_erythraea_NRRL_2338 2

Amycolatopsis_mediterranei_U32 2

Nocardioides_sp._JS614 1

Microlunatus_phosphovorus_NM-1 1

Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 1

Verrucosispora_maris_AB-18-032 2

Micromonospora_sp._L5 1

Micromonospora_aurantiaca_ATCC_27029 1

Actinoplanes_sp._N902-109 1

Actinoplanes_sp._SE50/110 1

Actinoplanes_missouriensis_431 1

Tsukamurella_paurometabola_DSM_20162 3

Gordonia_sp._KTR9 1

Gordonia_polyisoprenivorans_VH2 1

Gordonia_bronchialis_DSM_43247 2

Rhodococcus_jostii_RHA1 1

Rhodococcus_equi_103S 2

Rhodococcus_opacus_B4 6

Rhodococcus_erythropolis_PR4 2

Nocardia_cyriacigeorgica_GUH-2 2

Nocardia_farcinica_IFM_10152 3

Amycolicicoccus_subflavus_DQS3-9A1 1

Mycobacterium_massiliense_str._GO_06 1

Mycobacterium_abscessus_ATCC_19977 2

Mycobacterium_intracellulare_ATCC_13950 1

Mycobacterium_avium_104 2

Mycobacterium_vanbaalenii_PYR-1 2

Mycobacterium_gilvum_PYR-GCK 1

Mycobacterium_chubuense_NBB4 1

Mycobacterium_marinum_M 1

Mycobacterium_smegmatis_str._MC2_155 1

Mycobacterium_leprae_Br4923 1

Corynebacterium_efficiens_YS-314 1

Corynebacterium_ulcerans_0102 1

Corynebacterium_urealyticum_DSM_7109 1

Corynebacterium_jeikeium_K411 1

Corynebacterium_pseudotuberculosis_316 1

Corynebacterium_glutamicum_R 1

Corynebacterium_diphtheriae_NCTC_13129 1

Kytococcus_sedentarius_DSM_20547 1

Beutenbergia_cavernae_DSM_12333 0

Leifsonia_xyli_subsp._xyli_str._CTCB07 1

Microbacterium_testaceum_StLB037 1

Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 2

Jonesia_denitrificans_DSM_20603 2

Intrasporangium_calvum_DSM_43043 1

Brachybacterium_faecium_DSM_4810 2

Xylanimonas_cellulosilytica_DSM_15894 1

Cellulomonas_flavigena_DSM_20109 1

[Cellvibrio]_gilvus_ATCC_13127 2

Arthrobacter_phenanthrenivorans_Sphe3 2

Arthrobacter_chlorophenolicus_A6 1

Arthrobacter_aurescens_TC1 2

Arthrobacter_arilaitensis_Re117 1

Kocuria_rhizophila_DC2201 1

Rothia_dentocariosa_ATCC_17931 1

Arthrobacter_sp._Rue61a 2

Arthrobacter_sp._FB24 2

Renibacterium_salmoninarum_ATCC_33209 1

Micrococcus_luteus_NCTC_2665 1

Bifidobacterium_longum_subsp._longum_JDM301 2

Bifidobacterium_animalis_subsp._lactis_Bl-04 1

Bifidobacterium_breve_ACS-071-V-Sch8b 1

Arcanobacterium_haemolyticum_DSM_20595 1

Mobiluncus_curtisii_ATCC_43063 1

Actinomyces_sp._F0330 1

Dehalococcoides_ethenogenes_195 1

Dehalococcoides_sp._BAV1 1

Dehalogenimonas_lykanthroporepellens_BL-DC-9 2

Veillonella_parvula_DSM_2008 1

Megasphaera_elsdenii_DSM_20460 1

Selenomonas_sputigena_ATCC_35185 1

Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1

Symbiobacterium_thermophilum_IAM_14863 1

Clostridium_cellulolyticum_H10 1

Sulfobacillus_acidophilus_DSM_10332 2

Candidatus_Desulforudis_audaxviator_MP104C 1

Pelotomaculum_thermopropionicum_SI 1

Desulfosporosinus_orientis_DSM_765 1

Desulfotomaculum_acetoxidans_DSM_771 2

Desulfotomaculum_kuznetsovii_DSM_6115 1

Syntrophothermus_lipocalidus_DSM_12680 1

Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 2

Heliobacterium_modesticaldum_Ice1 3

Clostridium_sp._BNL1100 1

Caldicellulosiruptor_obsidiansis_OB47 1

Caldicellulosiruptor_kronotskyensis_2002 1

Caldicellulosiruptor_hydrothermalis_108 1

Caldicellulosiruptor_owensensis_OL 1

Caldicellulosiruptor_lactoaceticus_6A 1

Caldicellulosiruptor_kristjanssonii_177R1B 1

Caldicellulosiruptor_saccharolyticus_DSM_8903 1

Caldicellulosiruptor_bescii_DSM_6725 2

Moorella_thermoacetica_ATCC_39073 1

Ammonifex_degensii_KC4 2

Lactobacillus_kefiranofaciens_ZW3 1

Lactobacillus_amylovorus_GRL1118 1

Lactobacillus_helveticus_DPC_4571 1

Streptococcus_equi_subsp._equi_4047 1

Exiguobacterium_sp._MH3 1

Exiguobacterium_sp._AT1b 2

Exiguobacterium_sibiricum_255-15 1

Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1

Paenibacillus_mucilaginosus_3016 1

Paenibacillus_polymyxa_M1 1

Solibacillus_silvestris_StLB046 1

Geobacillus_thermoglucosidasius_C56-YS93 1

Lysinibacillus_sphaericus_C3-41 2

Geobacillus_thermoleovorans_CCB_US3_UF5 1

Geobacillus_kaustophilus_HTA426 1

Geobacillus_sp._GHH01 1

Geobacillus_sp._WCH70 1

Geobacillus_thermodenitrificans_NG80-2 1

Bacillus_sp._JS 1

Bacillus_sp._1NLA3E 1

Bacillus_amyloliquefaciens_FZB42 1

Bacillus_atrophaeus_1942 1

Bacillus_subtilis_subsp._subtilis_str._168 1

Bacillus_halodurans_C-125 0

Bacillus_weihenstephanensis_KBAB4 2

Bacillus_thuringiensis_str._Al_Hakam 1

Bacillus_cereus_03BB102 1

Bacillus_anthracis_str._A0248 1

Bacillus_clausii_KSM-K16 2

Bacillus_pumilus_SAFR-032 1

Bacillus_megaterium_DSM_319 1

Bacillus_coagulans_2-6 1

Macrococcus_caseolyticus_JCSC5402 1

Staphylococcus_haemolyticus_JCSC1435 1

Staphylococcus_epidermidis_RP62A 1

Gemmatimonas_aurantiaca_T-27 1

Chlorobium_luteolum_DSM_273 0

Chlorobium_phaeovibrioides_DSM_265 0

Chloroherpeton_thalassium_ATCC_35110 1

Prosthecochloris_aestuarii_DSM_271 1

Chitinophaga_pinensis_DSM_2588 1

Salinibacter_ruber_M8 0

Candidatus_Cardinium_hertigii 1

Belliella_baltica_DSM_15883 1

Fibrella_aestuarina 2

Dyadobacter_fermentans_DSM_18053 2

Cytophaga_hutchinsonii_ATCC_33406 1

Spirosoma_linguale_DSM_74 3

Runella_slithyformis_DSM_19594 2

Pedobacter_heparinus_DSM_2366 1

Zunongwangia_profunda_SM-A87 1

Krokinobacter_sp._4H-3-7-5 1

Capnocytophaga_canimorsus_Cc5 1

Candidatus_Protochlamydia_amoebophila_UWE25 1

Parachlamydia_acanthamoebae_UV-7 1

Chlamydophila_pecorum_E58 1

Chlamydia_muridarum_Nigg 1

Chlamydophila_pneumoniae_TW-183 1

Chlamydophila_caviae_GPIC 1

Chlamydophila_felis_Fe/C-56 1

Chlamydophila_abortus_S26/3 1

Chlamydia_psittaci_01DC11 1

Chlamydia_trachomatis_B/Jali20/OT 1

Phycisphaera_mikurensis_NBRC_102666 2

Isosphaera_pallida_ATCC_43644 1

Planctomyces_limnophilus_DSM_3776 1

Coraliomargarita_akajimensis_DSM_45221 1

Opitutus_terrae_PB90-1 5

Thermovirga_lienii_DSM_17291 1

Aminobacterium_colombiense_DSM_12261 1

Thermanaerovibrio_acidaminovorans_DSM_6589 1

Anaerobaculum_mobile_DSM_13181 1

Spirochaeta_smaragdinae_DSM_11293 1

Sphaerochaeta_pleomorpha_str._Grapes 1

Spirochaeta_caldaria_DSM_7334 1

Treponema_azotonutricium_ZAS-9 1

Treponema_primitia_ZAS-2 1

Treponema_brennaborense_DSM_12168 1

Thermodesulfatator_indicus_DSM_15286 1

Candidatus_Solibacter_usitatus_Ellin6076 5

Granulicella_tundricola_MP5ACTX9 1

Candidatus_Koribacter_versatilis_Ellin345 1

Terriglobus_saanensis_SP1PR4 1

Terriglobus_roseus_DSM_18391 1

Acidobacterium_capsulatum_ATCC_51196 1

Leptospirillum_ferrooxidans_C2-3 1

candidate_division_WWE3_bacterium_RAAC2_WWE3_1 1

Acidithiobacillus_ferrivorans_SS3 2

Acidithiobacillus_caldus_SM-1 2

Acidithiobacillus_ferrooxidans_ATCC_53993 2

Bdellovibrio_bacteriovorus_HD100 1

Nitratifractor_salsuginis_DSM_16511 1

uncultured_Sulfuricurvum_sp._RIFRC-1 1

Sulfuricurvum_kujiense_DSM_16994 1

Sulfurimonas_autotrophica_DSM_16294 1

Sulfurimonas_denitrificans_DSM_1251 1

Syntrophus_aciditrophicus_SB 1

Desulfomonile_tiedjei_DSM_6799 1

Desulfurivibrio_alkaliphilus_AHT2 0

Desulfococcus_oleovorans_Hxd3 1

Desulfohalobium_retbaense_DSM_5692 1

Desulfovibrio_aespoeensis_Aspo-2 1

Desulfovibrio_magneticus_RS-1 1

Desulfovibrio_salexigens_DSM_2638 1

Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 0

Geobacter_lovleyi_SZ 2

Geobacter_sulfurreducens_KN400 1

Geobacter_metallireducens_GS-15 2

Pelobacter_propionicus_DSM_2379 1

Pelobacter_carbinolicus_DSM_2380 1

Babela_massiliensis 1

Haliangium_ochraceum_DSM_14365 2

Sorangium_cellulosum_'So_ce_56' 2

Anaeromyxobacter_sp._Fw109-5 2

Anaeromyxobacter_dehalogenans_2CP-1 2

Stigmatella_aurantiaca_DW4/3-1 2

Corallococcus_coralloides_DSM_2259 1

Myxococcus_xanthus_DK_1622 2

Myxococcus_fulvus_HW-1 2

Dechloromonas_aromatica_RCB 1

Thauera_sp._MZ1T 3

Azoarcus_sp._KH32C 1

Azoarcus_sp._BH72 1

Aromatoleum_aromaticum_EbN1 1

Dechlorosoma_suillum_PS 2

Pseudogulbenkiania_sp._NH8B 1

Chromobacterium_violaceum_ATCC_12472 1

Neisseria_meningitidis_alpha14 1

Neisseria_meningitidis_FAM18 1

Neisseria_lactamica_020-06 1

Neisseria_gonorrhoeae_NCCP11945 1

Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 2

beta_proteobacterium_CB 2

Methylibium_petroleiphilum_PM1 2

Thiomonas_arsenitoxydans 1

Thiomonas_intermedia_K12 1

Rubrivivax_gelatinosus_IL144 2

Leptothrix_cholodnii_SP-6 2

Burkholderia_rhizoxinica_HKI_454 1

Burkholderia_phytofirmans_PsJN 2

Burkholderia_phymatum_STM815 4

Burkholderia_xenovorans_LB400 2

Ralstonia_eutropha_JMP134 1

Cupriavidus_taiwanensis_LMG_19424 3

Cupriavidus_metallidurans_CH34 1

Cupriavidus_necator_N-1 3

Ralstonia_eutropha_H16 2

Ralstonia_pickettii_12D 5

Ralstonia_solanacearum_CFBP2957 2

Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 2

Burkholderia_sp._RPE64 2

Burkholderia_sp._CCGE1002 2

Burkholderia_thailandensis_E264 2

Burkholderia_pseudomallei_1106a 1

Burkholderia_mallei_SAVP1 1

Burkholderia_ambifaria_AMMD 2

Burkholderia_cenocepacia_HI2424 1

Burkholderia_multivorans_ATCC_17616 2

Burkholderia_vietnamiensis_G4 2

Burkholderia_gladioli_BSR3 1

Burkholderia_glumae_BGR1 0

Verminephrobacter_eiseniae_EF01-2 1

Alicycliphilus_denitrificans_K601 1

Ramlibacter_tataouinensis_TTB310 1

Delftia_sp._Cs1-4 1

Delftia_acidovorans_SPH-1 2

Polaromonas_sp._JS666 1

Polaromonas_naphthalenivorans_CJ2 2

Variovorax_paradoxus_S110 1

Rhodoferax_ferrireducens_T118 3

Acidovorax_ebreus_TPSY 1

Acidovorax_sp._KKS102 2

Acidovorax_sp._JS42 1

Acidovorax_citrulli_AAC00-1 2

Acidovorax_avenae_subsp._avenae_ATCC_19860 2

Comamonas_testosteroni_CNB-2 2

Herminiimonas_arsenicoxydans 3

Collimonas_fungivorans_Ter331 1

Janthinobacterium_sp._Marseille 3

Herbaspirillum_seropedicae_SmR1 1

Pusillimonas_sp._T7-7 1

Advenella_kashmirensis_WT001 1

Bordetella_petrii_DSM_12804 4

Bordetella_avium_197N 2

Bordetella_pertussis_Tohama_I 1

Bordetella_parapertussis_12822 1

Bordetella_bronchiseptica_RB50 1

Achromobacter_xylosoxidans_A8 4

Achromobacter_xylosoxidans 1

Nitrosospira_multiformis_ATCC_25196 1

Nitrosomonas_sp._Is79A3 1

Nitrosomonas_eutropha_C91 1

Methylotenera_versatilis_301 2

Methylotenera_mobilis_JLW8 2

Methylobacillus_flagellatus_KT 1

Magnetococcus_marinus_MC-1 1

Asticcacaulis_excentricus_CB_48 1

Brevundimonas_subvibrioides_ATCC_15264 1

Caulobacter_sp._K31 1

Caulobacter_crescentus_NA1000 1

Caulobacter_segnis_ATCC_21756 1

Phenylobacterium_zucineum_HLK1 1

Erythrobacter_litoralis_HTCC2594 3

Sphingopyxis_alaskensis_RB2256 1

Novosphingobium_sp._PP1Y 5

Sphingobium_sp._SYK-6 1

Sphingobium_japonicum_UT26S 2

Sphingobium_chlorophenolicum_L-1 2

Sphingomonas_sp._MM-1 2

Sphingomonas_wittichii_RW1 1

Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 2

Hirschia_baltica_ATCC_49814 1

Hyphomonas_neptunium_ATCC_15444 1

Dinoroseobacter_shibae_DFL_12 3

Phaeobacter_gallaeciensis_2.10 1

Pseudovibrio_sp._FO-BEG1 1

Jannaschia_sp._CCS1 1

Ruegeria_sp._TM1040 2

Ruegeria_pomeroyi_DSS-3 1

Ketogulonicigenium_vulgare_Y25 1

Ketogulonigenium_vulgarum_WSH-001 1

Roseobacter_denitrificans_OCh_114 0

Rhodobacter_capsulatus_SB_1003 2

Tistrella_mobilis_KA081020-065 3

Magnetospirillum_magneticum_AMB-1 1

Rhodospirillum_centenum_SW 1

Rhodospirillum_rubrum_F11 1

Azospirillum_lipoferum_4B 2

Azospirillum_sp._B510 1

Azospirillum_brasilense_Sp245 1

Gluconacetobacter_xylinus_NBRC_3288 3

Granulibacter_bethesdensis_CGDNIH1 1

Acidiphilium_multivorum_AIU301 1

Acidiphilium_cryptum_JF-5 2

Gluconobacter_oxydans_621H 1

Acetobacter_pasteurianus_IFO_3283-01 2

Polymorphum_gilvum_SL003B-26A1 1

Micavibrio_aeruginosavorus_ARL-13 1

Candidatus_Puniceispirillum_marinum_IMCC1322 1

alpha_proteobacterium_HIMB5 1

Candidatus_Pelagibacter_sp._IMCC9063 1

Ehrlichia_canis_str._Jake 1

Ehrlichia_ruminantium_str._Gardel 1

Orientia_tsutsugamushi_str._Boryong 1

Starkeya_novella_DSM_506 1

Xanthobacter_autotrophicus_Py2 2

Azorhizobium_caulinodans_ORS_571 1

Methylobacterium_chloromethanicum_CM4 2

Methylobacterium_extorquens_AM1 2

Methylobacterium_sp._4-46 2

Methylobacterium_populi_BJ001 1

Methylobacterium_nodulans_ORS_2060 4

Methylobacterium_radiotolerans_JCM_2831 3

Parvibaculum_lavamentivorans_DS-1 1

Ochrobactrum_anthropi_ATCC_49188 3

Sinorhizobium_fredii_NGR234 0

Sinorhizobium_medicae_WSM419 1

Sinorhizobium_meliloti_AK83 0

Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1

Rhizobium_leguminosarum_bv._viciae_3841 2

Agrobacterium_tumefaciens_str._C58 1

Agrobacterium_radiobacter_K84 1

Agrobacterium_sp._H13-3 2

Agrobacterium_vitis_S4 3

Mesorhizobium_sp._BNC1 1

Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 0

Mesorhizobium_loti_MAFF303099 1

Methylocella_silvestris_BL2 1

Beijerinckia_indica_subsp._indica_ATCC_9039 2

Pelagibacterium_halotolerans_B2 2

Rhodomicrobium_vannielii_ATCC_17100 0

Hyphomicrobium_sp._MC1 1

Hyphomicrobium_denitrificans_ATCC_51888 1

Oligotropha_carboxidovorans_OM4 1

Rhodopseudomonas_palustris_BisA53 1

Nitrobacter_winogradskyi_Nb-255 1

Nitrobacter_hamburgensis_X14 2

Bradyrhizobium_japonicum_USDA_110 1

Bartonella_tribocorum_CIP_105476 1

Saccharophagus_degradans_2-40 1

Teredinibacter_turnerae_T7901 1

Cellvibrio_japonicus_Ueda107 1

Aggregatibacter_actinomycetemcomitans_D7S-1 1

Haemophilus_somnus_129PT 1

Gallibacterium_anatis_UMN179 1

Haemophilus_ducreyi_35000HP 2

Haemophilus_parainfluenzae_T3T1 1

Haemophilus_influenzae_PittEE 1

Actinobacillus_succinogenes_130Z 1

Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1

Oceanimonas_sp._GK1 1

Tolumonas_auensis_DSM_9187 1

Aeromonas_veronii_B565 3

Aeromonas_salmonicida_subsp._salmonicida_A449 2

Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 3

Aliivibrio_salmonicida_LFI1238 2

Vibrio_fischeri_MJ11 1

Vibrio_sp._Ex25 2

Vibrio_harveyi_ATCC_BAA-1116 2

Vibrio_parahaemolyticus_RIMD_2210633 2

Vibrio_splendidus_LGP32 2

Vibrio_anguillarum_775 2

Vibrio_furnissii_NCTC_11218 1

Vibrio_vulnificus_MO6-24/O 2

Vibrio_cholerae_O395 1

Photobacterium_profundum_SS9 2

Psychromonas_ingrahamii_37 1

Psychromonas_sp._CNPT3 1

Idiomarina_loihiensis_L2TR 1

Ferrimonas_balearica_DSM_9799 1

Shewanella_piezotolerans_WP3 1

Shewanella_halifaxensis_HAW-EB4 1

Shewanella_sediminis_HAW-EB3 0

Shewanella_pealeana_ATCC_700345 1

Shewanella_oneidensis_MR-1 1

Shewanella_baltica_OS185 1

Shewanella_woodyi_ATCC_51908 2

Shewanella_sp._MR-4 2

Shewanella_amazonensis_SB2B 1

Shewanella_violacea_DSS12 2

Shewanella_frigidimarina_NCIMB_400 1

Shewanella_putrefaciens_CN-32 2

Pseudoalteromonas_sp._SM9913 1

Pseudoalteromonas_haloplanktis_TAC125 1

Glaciecola_sp._4H-3-7+YE-5 2

Marinobacter_sp._BSs20148 2

Marinobacter_aquaeolei_VT8 2

Alteromonas_sp._SN2 1

Alteromonas_macleodii_str._'Deep_ecotype' 1

Kangiella_koreensis_DSM_16069 2

Hahella_chejuensis_KCTC_2396 2

Halomonas_elongata_DSM_2581 1

Methylomicrobium_alcaliphilum 1

Methylococcus_capsulatus_str._Bath 1

Dichelobacter_nodosus_VCS1703A 1

Rhodanobacter_denitrificans 7

Frateuria_aurantia_DSM_6220 1

Pseudoxanthomonas_spadix_BD-a59 0

Pseudoxanthomonas_suwonensis_11-1 1

Stenotrophomonas_maltophilia_K279a 1

Xylella_fastidiosa_M23 1

Xanthomonas_axonopodis_pv._citri_str._306 1

Xanthomonas_albilineans_GPE_PC73 1

Xanthomonas_oryzae_pv._oryzae_PXO99A 2

Xanthomonas_campestris_pv._campestris_str._B100 2

Halothiobacillus_neapolitanus_c2 1

Spiribacter_sp._UAH-SP71 1

Alkalilimnicola_ehrlichii_MLHE-1 1

Halorhodospira_halophila_SL1 1

Allochromatium_vinosum_DSM_180 0

Nitrosococcus_watsonii_C-113 2

Nitrosococcus_halophilus_Nc4 1

Nitrosococcus_oceani_ATCC_19707 2

Coxiella_burnetii_Dugway_5J108-111 2

gamma_proteobacterium_HdN1 2

Photorhabdus_asymbiotica 2

Photorhabdus_luminescens_subsp._laumondii_TTO1 2

Xenorhabdus_bovienii_SS-2004 2

Xenorhabdus_nematophila_ATCC_19061 2

Providencia_stuartii_MRSN_2154 2

Proteus_mirabilis_HI4320 1

Edwardsiella_ictaluri_93-146 2

Edwardsiella_tarda_EIB202 2

Rahnella_sp._Y9602 2

Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 3

Yersinia_pseudotuberculosis_IP_31758 2

Yersinia_pestis_Pestoides_F 2

Yersinia_enterocolitica_subsp._enterocolitica_8081 2

Serratia_sp._AS12 2

Serratia_sp._ATCC_39006 2

Serratia_plymuthica_AS9 2

Serratia_proteamaculans_568 2

Dickeya_dadantii_Ech703 2

Dickeya_zeae_Ech1591 2

Pectobacterium_wasabiae_WPP163 2

Pectobacterium_sp._SCC3193 2

Pectobacterium_atrosepticum_SCRI1043 2

Pectobacterium_carotovorum_subsp._carotovorum_PC1 2

Sodalis_glossinidius_str._'morsitans' 2

Pantoea_sp._At-9b 3

Pantoea_vagans_C9-1 3

Pantoea_ananatis_LMG_20103 2

Erwinia_tasmaniensis_Et1/99 1

Erwinia_sp._Ejp617 1

Erwinia_billingiae_Eb661 2

Erwinia_pyrifoliae_Ep1/96 1

Erwinia_amylovora_ATCC_49946 1

Escherichia_blattae_DSM_4481 2

Cronobacter_turicensis_z3032 2

Cronobacter_sakazakii_ES15 2

Enterobacteriaceae_bacterium_strain_FGI_57 2

Shigella_sonnei_Ss046 2

Shigella_flexneri_5_str._8401 2

Shigella_dysenteriae_Sd197 2

Shigella_boydii_CDC_3083-94 2

Salmonella_bongori_NCTC_12419 2

Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 2

Klebsiella_oxytoca_E718 3

Klebsiella_variicola_At-22 2

Klebsiella_pneumoniae_NTUH-K2044 2

Enterobacter_aerogenes_KCTC_2190 2

Escherichia_fergusonii_ATCC_35469 2

Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 2

Enterobacter_sp._R4-368 2

Enterobacter_sp._638 2

Enterobacter_asburiae_LF7a 2

Enterobacter_cloacae_subsp._dissolvens_SDM 1

Citrobacter_rodentium_ICC168 2

Citrobacter_koseri_ATCC_BAA-895 2

Azotobacter_vinelandii_DJ 3

Pseudomonas_sp._TKP 3

Pseudomonas_sp._UW4 2

Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1

Pseudomonas_entomophila_L48 2

Pseudomonas_syringae_pv._tomato_str._DC3000 5

Pseudomonas_stutzeri_A1501 1

Pseudomonas_fulva_12-X 1

Pseudomonas_putida_F1 2

Pseudomonas_protegens_Pf-5 3

Pseudomonas_fluorescens_SBW25 2

Pseudomonas_mendocina_ymp 1

Pseudomonas_aeruginosa_UCBPP-PA14 2

Pseudomonas_sp._VLB120 2

Psychrobacter_sp._G 2

Psychrobacter_sp._PRwf-1 1

Psychrobacter_arcticus_273-4 2

Psychrobacter_cryohalolentis_K5 2

Moraxella_catarrhalis_RH4 2

Acinetobacter_baumannii_ATCC_17978 1

Acinetobacter_sp._ADP1 1

Methylophaga_sp._JAM1 1

Thiomicrospira_crunogena_XCL-2 1

Thioalkalimicrobium_cyclicum_ALM1 2

halophilic_archaeon_DL31 1

Pyrococcus_abyssi_GE5 1

Natrialba_magadii_ATCC_43099 1

Halogeometricum_borinquense_DSM_11551 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 3

Saccharomyces_cerevisiae_SGD_(SGD) (Baker's yeast) 1

Oryza_sativa_ssp._Indica_(Subspecies) (Long-grained rice) 0

Chroococcidiopsis_thermalis_PCC_7203 1

Chamaesiphon_minutus_PCC_6605 3

Synechocystis_sp._PCC_6803_substr._PCC-P 1

Synechocystis_sp._PCC_6803_substr._PCC-N 1

Synechocystis_sp._PCC_6803_substr._GT-I 1

Synechocystis_sp._PCC_6803 1

Synechococcus_sp._PCC_7002 1

Crinalium_epipsammum_PCC_9333 0

Oscillatoria_nigro-viridis_PCC_7112 2

Cyanothece_sp._PCC_7822 2

Cyanothece_sp._ATCC_51142 1

Calothrix_parietina_Calothrix_sp._PCC_6303 1

Anabaena_cylindrica_PCC_7122 1

Frankia_sp._EuI1c 1

Frankia_sp._CcI3 1

Nocardiopsis_alba_ATCC_BAA-2165 2

Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1

Saccharothrix_espanaensis_DSM_44229 2

Amycolatopsis_mediterranei_RB 2

Amycolatopsis_mediterranei_S699 2

Amycolatopsis_mediterranei_S699 2

Amycolatopsis_orientalis_HCCB10007 1

Actinoplanes_friuliensis_DSM_7358 1

Rhodococcus_pyridinivorans_SB3094 2

Rhodococcus_erythropolis_CCM2595 2

Nocardia_brasiliensis_ATCC_700358 3

Mycobacterium_sp._MOTT36Y 1

Mycobacterium_sp._JDM601 1

Mycobacterium_abscessus_subsp._bolletii_50594 1

Mycobacterium_yongonense_05-1390 1

Mycobacterium_intracellulare_MOTT-64 1

Mycobacterium_intracellulare_MOTT-02 1

Mycobacterium_avium_subsp._paratuberculosis_MAP4 1

Mycobacterium_avium_subsp._paratuberculosis_K-10 1

Mycobacterium_canettii_CIPT_140070017 1

Mycobacterium_tuberculosis_RGTB327 1

Mycobacterium_gilvum_Spyr1 1

Mycobacterium_smegmatis_str._MC2_155 1

Mycobacterium_leprae_TN 1

Mycobacterium_kansasii_ATCC_12478 1

Corynebacterium_maris_DSM_45190 1

Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1

Corynebacterium_terpenotabidum_Y-11 1

Corynebacterium_ulcerans_BR-AD22 1

Corynebacterium_ulcerans_809 1

Corynebacterium_urealyticum_DSM_7111 1

Corynebacterium_argentoratense_DSM_44202 1

Corynebacterium_pseudotuberculosis_258 1

Corynebacterium_pseudotuberculosis_Cp162 1

Corynebacterium_pseudotuberculosis_P54B96 1

Corynebacterium_pseudotuberculosis_267 1

Corynebacterium_pseudotuberculosis_1/06-A 1

Corynebacterium_pseudotuberculosis_42/02-A 1

Corynebacterium_pseudotuberculosis_3/99-5 1

Corynebacterium_pseudotuberculosis_31 1

Corynebacterium_pseudotuberculosis_CIP_52.97 1

Corynebacterium_pseudotuberculosis_PAT10 1

Corynebacterium_pseudotuberculosis_I19 1

Corynebacterium_pseudotuberculosis_FRC41 1

Corynebacterium_pseudotuberculosis_C231 1

Corynebacterium_pseudotuberculosis_1002 1

Corynebacterium_glutamicum_MB001 1

Corynebacterium_glutamicum_SCgG2 1

Corynebacterium_glutamicum_SCgG1 1

Corynebacterium_glutamicum_ATCC_13032 1

Corynebacterium_glutamicum_ATCC_13032 1

Corynebacterium_glutamicum_ATCC_13032 1

Corynebacterium_diphtheriae_BH8 1

Corynebacterium_diphtheriae_INCA_402 1

Corynebacterium_diphtheriae_VA01 1

Corynebacterium_diphtheriae_HC04 1

Corynebacterium_diphtheriae_HC03 1

Corynebacterium_diphtheriae_HC02 1

Corynebacterium_diphtheriae_CDCE_8392 1

Corynebacterium_diphtheriae_PW8 1

Corynebacterium_diphtheriae_C7_(beta) 1

Corynebacterium_diphtheriae_31A 1

Leifsonia_xyli_subsp._cynodontis_DSM_46306 1

Clavibacter_michiganensis_subsp._sepedonicus 2

Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 2

Bifidobacterium_longum_NCC2705 1

Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 2

Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 2

Bifidobacterium_longum_subsp._longum_KACC_91563 2

Bifidobacterium_longum_subsp._longum_BBMN68 1

Bifidobacterium_longum_subsp._longum_JCM_1217 1

Bifidobacterium_thermophilum_RBL67 1

Bifidobacterium_animalis_subsp._animalis_ATCC_25527 1

Bifidobacterium_animalis_subsp._lactis_Bl12 1

Bifidobacterium_animalis_subsp._lactis_B420 1

Bifidobacterium_animalis_subsp._lactis_ATCC_27673 1

Bifidobacterium_animalis_subsp._lactis_BLC1 1

Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 1

Bifidobacterium_animalis_subsp._lactis_Bi-07 1

Bifidobacterium_animalis_subsp._lactis_V9 1

Bifidobacterium_animalis_subsp._lactis_DSM_10140 1

Bifidobacterium_animalis_subsp._lactis_BB-12 1

Bifidobacterium_animalis_subsp._lactis_AD011 1

Bifidobacterium_breve_UCC2003 1

Actinomyces_graevenitzii_C83_ 1

Actinomyces_odontolyticus_ATCC_17982 1

Actinomyces_viscosus_C505 1

Dehalococcoides_mccartyi_GY50 1

Dehalococcoides_mccartyi_DCMB5 2

Dehalococcoides_mccartyi_BTF08 1

Dehalococcoides_sp._GT 1

Dehalococcoides_sp._VS 1

Dehalococcoides_sp._CBDB1 1

Chthonomonas_calidirosea_T49 1

Sulfobacillus_acidophilus_TPY 2

Desulfosporosinus_meridiei_DSM_13257 1

Desulfitobacterium_dichloroeliminans_LMG_P-21439 1

Clostridium_botulinum_H04402_065 1

Carnobacterium_maltaromaticum_LMA28 1

Lactobacillus_helveticus_R0052 1

Lactobacillus_helveticus_H10 1

Lactobacillus_helveticus_CNRZ32 1

Streptococcus_equi_subsp._zooepidemicus_MGCS10565 1

Streptococcus_equi_subsp._zooepidemicus 1

Exiguobacterium_antarcticum_B7 1

Paenibacillus_sp._Y412MC10 1

Paenibacillus_mucilaginosus_KNP414 1

Paenibacillus_mucilaginosus_K02 1

Geobacillus_sp._C56-T3 1

Geobacillus_sp._Y4.1MC1 1

Geobacillus_sp._Y412MC52 1

Geobacillus_sp._Y412MC61 1

Amphibacillus_xylanus_NBRC_15112 1

Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 2

Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1

Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1

Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1

Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1

Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1

Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1

Bacillus_amyloliquefaciens_LFB112 1

Bacillus_amyloliquefaciens_CC178 1

Bacillus_amyloliquefaciens_Y2 1

Bacillus_amyloliquefaciens_IT-45 1

Bacillus_amyloliquefaciens_XH7 1

Bacillus_amyloliquefaciens_LL3 1

Bacillus_amyloliquefaciens_TA208 1

Bacillus_amyloliquefaciens_DSM_7 1

Bacillus_licheniformis_9945A 1

Bacillus_subtilis_PY79 1

Bacillus_subtilis_XF-1 1

Bacillus_subtilis_QB928 1

Bacillus_subtilis_BSn5 1

Bacillus_subtilis_subsp._subtilis_str._BAB-1 1

Bacillus_subtilis_subsp._subtilis_str._BSP1 1

Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1

Bacillus_subtilis_subsp._subtilis_6051-HGW 1

Bacillus_subtilis_subsp._spizizenii_TU-B-10 1

Bacillus_subtilis_subsp._spizizenii_str._W23 1

Bacillus_subtilis_subsp._natto_BEST195 1

Bacillus_infantis_NRRL_B-14911 2

Bacillus_cereus_subsp._cytotoxis_NVH_391-98 2

Bacillus_toyonensis_BCT-7112 1

Bacillus_thuringiensis_HD-771 2

Bacillus_thuringiensis_HD-789 1

Bacillus_thuringiensis_MC28 3

Bacillus_thuringiensis_serovar_chinensis_CT-43 1

Bacillus_thuringiensis_YBT-1518 2

Bacillus_thuringiensis_Bt407 1

Bacillus_thuringiensis_serovar_konkukian_str._97-27 2

Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1

Bacillus_thuringiensis_BMB171 2

Bacillus_thuringiensis_serovar_finitimus_YBT-020 1

Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 2

Bacillus_cereus_FRI-35 2

Bacillus_cereus_biovar_anthracis_str._CI 1

Bacillus_cereus_AH820 2

Bacillus_cereus_AH187 2

Bacillus_cereus_B4264 1

Bacillus_cereus_G9842 2

Bacillus_cereus_Q1 2

Bacillus_cereus_F837/76 1

Bacillus_cereus_NC7401 2

Bacillus_cereus_E33L 2

Bacillus_cereus_ATCC_14579 1

Bacillus_cereus_ATCC_10987 2

Bacillus_anthracis_str._H9401 1

Bacillus_anthracis_str._CDC_684 1

Bacillus_anthracis_str._'Ames_Ancestor' 1

Bacillus_anthracis_str._Sterne 1

Bacillus_anthracis_str._Ames 1

Bacillus_megaterium_WSH-002 2

Bacillus_megaterium_QM_B1551 2

Staphylococcus_pseudintermedius_ED99 1

Staphylococcus_epidermidis_ATCC_12228 1

Salinibacter_ruber_DSM_13855 0

Emticicia_oligotrophica_DSM_17448 1

Nonlabens_dokdonensis_DSW-6 1

Psychroflexus_torquis_ATCC_700755 1

Chlamydia_pecorum_P787 1

Chlamydia_pecorum_W73 1

Chlamydia_pecorum_PV3056/3 1

Chlamydophila_pneumoniae_LPCoLN 1

Chlamydophila_pneumoniae_J138 1

Chlamydophila_pneumoniae_CWL029 1

Chlamydophila_pneumoniae_AR39 1

Chlamydia_psittaci_M56 1

Chlamydia_psittaci_08DC60 1

Chlamydia_psittaci_02DC15 1

Chlamydia_psittaci_C19/98 1

Chlamydophila_psittaci_RD1 1

Chlamydia_trachomatis_C/TW-3 1

Chlamydia_trachomatis_L2/434/Bu(f) 1

Chlamydia_trachomatis_L2/434/Bu(i) 1

Chlamydia_trachomatis_IU888 1

Chlamydia_trachomatis_IU824 1

Chlamydia_trachomatis_L2b/Canada2 1

Chlamydia_trachomatis_L2b/Canada1 1

Chlamydia_trachomatis_L3/404/LN 1

Chlamydia_trachomatis_L2b/Ams5 1

Chlamydia_trachomatis_L2b/Ams4 1

Chlamydia_trachomatis_L2b/Ams3 1

Chlamydia_trachomatis_L2b/Ams2 1

Chlamydia_trachomatis_L2b/Ams1 1

Chlamydia_trachomatis_L2b/795 1

Chlamydia_trachomatis_L2b/CV204 1

Chlamydia_trachomatis_L2b/LST 1

Chlamydia_trachomatis_L2b/UCH-2 1

Chlamydia_trachomatis_L2b/8200/07 1

Chlamydia_trachomatis_L2/25667R 1

Chlamydia_trachomatis_L1/224 1

Chlamydia_trachomatis_L1/115 1

Chlamydia_trachomatis_L1/440/LN 1

Chlamydia_trachomatis_K/SotonK1 1

Chlamydia_trachomatis_Ia/SotonIa3 1

Chlamydia_trachomatis_Ia/SotonIa1 1

Chlamydia_trachomatis_G/SotonG1 1

Chlamydia_trachomatis_F/SotonF3 1

Chlamydia_trachomatis_F/SW5 1

Chlamydia_trachomatis_F/SW4 1

Chlamydia_trachomatis_E/SotonE8 1

Chlamydia_trachomatis_E/SotonE4 1

Chlamydia_trachomatis_E/SW3 1

Chlamydia_trachomatis_D/SotonD6 1

Chlamydia_trachomatis_D/SotonD5 1

Chlamydia_trachomatis_D/SotonD1 1

Chlamydia_trachomatis_A/5291 1

Chlamydia_trachomatis_A/363 1

Chlamydia_trachomatis_RC-J/971 1

Chlamydia_trachomatis_RC-L2/55 1

Chlamydia_trachomatis_J/6276tet1 1

Chlamydia_trachomatis_RC-J/966 1

Chlamydia_trachomatis_RC-J(s)/122 1

Chlamydia_trachomatis_RC-F(s)/342 1

Chlamydia_trachomatis_RC-L2(s)/3 1

Chlamydia_trachomatis_RC-J/953 1

Chlamydia_trachomatis_RC-J943 1

Chlamydia_trachomatis_RC-Fs852 1

Chlamydia_trachomatis_RC-L2s46 1

Chlamydia_trachomatis_RC-F69 1

Chlamydia_trachomatis_L2c 1

Chlamydia_trachomatis_D-LC 1

Chlamydia_trachomatis_D-EC 1

Chlamydia_trachomatis_G/9301 1

Chlamydia_trachomatis_G/11074 1

Chlamydia_trachomatis_G/11222 1

Chlamydia_trachomatis_G/9768 1

Chlamydia_trachomatis_E/150 1

Chlamydia_trachomatis_E/11023 1

Chlamydia_trachomatis_B/TZ1A828/OT 1

Chlamydia_trachomatis_Sweden2 1

Chlamydia_trachomatis_E/Bour 1

Chlamydia_trachomatis_A2497 1

Chlamydia_trachomatis_A2497 1

Chlamydia_trachomatis_L2b/UCH-1/proctitis 1

Chlamydia_trachomatis_434/Bu 1

Chlamydia_trachomatis_A/HAR-13 1

Chlamydia_trachomatis_D/UW-3/CX 1

Singulisphaera_acidiphila_DSM_18658 2

Spirochaeta_thermophila_DSM_6578 1

Leptospirillum_ferriphilum_ML-04 1

Acidithiobacillus_ferrooxidans_ATCC_23270 2

Bdellovibrio_exovorus_JSS 1

Bdellovibrio_bacteriovorus_str._Tiberius 1

Desulfobacula_toluolica_Tol2 1

Desulfovibrio_vulgaris_str._'Miyazaki_F' 1

Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 2

Geobacter_sulfurreducens_PCA 1

Sorangium_cellulosum_So0157-2 1

Anaeromyxobacter_sp._K 2

Anaeromyxobacter_dehalogenans_2CP-C 2

Myxococcus_stipitatus_DSM_14675 2

Neisseria_meningitidis_WUE_2594 1

Neisseria_meningitidis_G2136 1

Neisseria_meningitidis_M04-240196 1

Neisseria_meningitidis_M01-240149 1

Neisseria_meningitidis_NZ-05/33 1

Neisseria_meningitidis_M01-240355 1

Neisseria_meningitidis_8013 1

Neisseria_meningitidis_053442 1

Neisseria_meningitidis_Z2491 1

Neisseria_meningitidis_H44/76 1

Neisseria_meningitidis_alpha710 1

Neisseria_meningitidis_MC58 1

Neisseria_gonorrhoeae_TCDC-NG08107 1

Neisseria_gonorrhoeae_FA_1090 1

Candidatus_Kinetoplastibacterium_galatii_TCC219 1

Candidatus_Kinetoplastibacterium_crithidii_TCC036E 1

Burkholderia_phenoliruptrix_BR3459a 1

Pandoraea_pnomenusa_3kgm 0

Ralstonia_pickettii_12J 3

Ralstonia_solanacearum_FQY_4 2

Ralstonia_solanacearum_Po82 2

Ralstonia_solanacearum_PSI07 2

Ralstonia_solanacearum_CMR15 1

Ralstonia_solanacearum_GMI1000 2

Polynucleobacter_necessarius_subsp._necessarius_STIR1 2

Burkholderia_sp._YI23 2

Burkholderia_sp._CCGE1003 1

Burkholderia_sp._CCGE1001 1

Burkholderia_sp._KJ006 2

Burkholderia_thailandensis_MSMB121 1

Burkholderia_pseudomallei_MSHR305 1

Burkholderia_pseudomallei_NCTC_13179 1

Burkholderia_pseudomallei_BPC006 1

Burkholderia_pseudomallei_1026b 1

Burkholderia_pseudomallei_MSHR346 1

Burkholderia_pseudomallei_668 1

Burkholderia_pseudomallei_1710b 1

Burkholderia_pseudomallei_K96243 1

Burkholderia_mallei_NCTC_10229 1

Burkholderia_mallei_NCTC_10247 1

Burkholderia_mallei_ATCC_23344 1

Burkholderia_lata 1

Burkholderia_ambifaria_MC40-6 2

Burkholderia_cenocepacia_MC0-3 2

Burkholderia_cenocepacia_AU_1054 1

Burkholderia_cenocepacia_J2315 1

Burkholderia_multivorans_ATCC_17616 2

Burkholderia_cepacia_GG4 2

Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1

Alicycliphilus_denitrificans_BC 1

Variovorax_paradoxus_B4 1

Variovorax_paradoxus_EPS 1

Bordetella_pertussis_CS 1

Bordetella_parapertussis_18323 1

Bordetella_parapertussis_Bpp5 1

Bordetella_bronchiseptica_MO149 1

Bordetella_bronchiseptica_253 1

Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1

Nitrosomonas_sp._AL212 1

Sulfuricella_denitrificans_skB26 1

Caulobacter_crescentus_CB15 1

Zymomonas_mobilis_subsp._mobilis_ATCC_29191 2

Zymomonas_mobilis_subsp._mobilis_CP4 2

Zymomonas_mobilis_subsp._mobilis_ATCC_10988 2

Zymomonas_mobilis_subsp._mobilis_ZM4 2

Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 1

Phaeobacter_gallaeciensis_DSM_17395 1

Phaeobacter_gallaeciensis_DSM_26640 3

Leisingera_methylohalidivorans_DSM_14336 1

Octadecabacter_antarcticus_307 1

Octadecabacter_arcticus_238 1

Rhodobacter_sphaeroides_ATCC_17025 2

Paracoccus_aminophilus_JCM_7686 4

Rhodospirillum_rubrum_ATCC_11170 1

Gluconobacter_oxydans_H24 2

Acetobacter_pasteurianus_386B 2

Acetobacter_pasteurianus_IFO_3283-12 2

Acetobacter_pasteurianus_IFO_3283-01-42C 2

Acetobacter_pasteurianus_IFO_3283-32 2

Acetobacter_pasteurianus_IFO_3283-26 2

Acetobacter_pasteurianus_IFO_3283-22 2

Acetobacter_pasteurianus_IFO_3283-07 2

Acetobacter_pasteurianus_IFO_3283-03 2

Micavibrio_aeruginosavorus_EPB 1

Candidatus_Pelagibacter_ubique_HTCC1062 1

Ehrlichia_ruminantium_str._Welgevonden 1

Ehrlichia_ruminantium_str._Welgevonden 1

Orientia_tsutsugamushi_str._Ikeda 1

Methylobacterium_extorquens_DM4 3

Methylobacterium_extorquens_PA1 1

Sinorhizobium_fredii_USDA_257 0

Sinorhizobium_fredii_HH103 0

Sinorhizobium_meliloti_GR4 1

Sinorhizobium_meliloti_Rm41 0

Sinorhizobium_meliloti_SM11 1

Sinorhizobium_meliloti_BL225C 1

Sinorhizobium_meliloti_1021 3

Rhizobium_etli_CFN_42 0

Rhizobium_etli_bv._mimosae_str._Mim1 1

Rhizobium_tropici_CIAT_899 2

Rhizobium_leguminosarum_bv._trifolii_WSM1325 2

Liberibacter_crescens_BT-1 1

Candidatus_Liberibacter_solanacearum_CLso-ZC1 1

Candidatus_Liberibacter_americanus_str._Sao_Paulo 1

Hyphomicrobium_nitrativorans_NL23 1

Oligotropha_carboxidovorans_OM5 1

Oligotropha_carboxidovorans_OM5 1

Rhodopseudomonas_palustris_DX-1 2

Rhodopseudomonas_palustris_TIE-1 1

Rhodopseudomonas_palustris_HaA2 0

Rhodopseudomonas_palustris_BisB5 1

Rhodopseudomonas_palustris_BisB18 1

Rhodopseudomonas_palustris_CGA009 0

Bradyrhizobium_sp._S23321 1

Bradyrhizobium_sp._BTAi1 1

Bradyrhizobium_oligotrophicum_S58 1

Bradyrhizobium_japonicum_USDA_6 1

Bartonella_quintana_RM-11 1

Mannheimia_succiniciproducens_MBEL55E 1

Aggregatibacter_actinomycetemcomitans_ANH9381 1

Aggregatibacter_actinomycetemcomitans_D11S-1 1

Haemophilus_somnus_2336 1

Haemophilus_influenzae_KR494 1

Haemophilus_influenzae_F3047 1

Haemophilus_influenzae_F3031 1

Haemophilus_influenzae_10810 1

Haemophilus_influenzae_86-028NP 1

Haemophilus_influenzae_R2866 1

Haemophilus_influenzae_R2846 1

Haemophilus_influenzae_Rd_KW20 1

Actinobacillus_suis_H91-0380 1

Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 1

Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 1

Aeromonas_hydrophila_ML09-119 3

Vibrio_fischeri_ES114 1

Vibrio_sp._EJY3 2

Vibrio_parahaemolyticus_BB22OP 1

Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 2

Vibrio_anguillarum_Listonella_anguillarum_M3 2

Vibrio_nigripulchritudo_VibrioScope 1

Vibrio_vulnificus_CMCP6 2

Vibrio_vulnificus_YJ016 2

Vibrio_cholerae_M66-2 1

Vibrio_cholerae_O395 1

Vibrio_cholerae_IEC224 1

Vibrio_cholerae_O1_str._2010EL-1786 1

Vibrio_cholerae_MJ-1236 1

Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 1

Idiomarina_loihiensis_GSL_199 1

Shewanella_sp._W3-18-1 0

Shewanella_sp._ANA-3 4

Shewanella_baltica_BA175 1

Shewanella_baltica_OS678 1

Shewanella_baltica_OS117 1

Shewanella_baltica_OS223 1

Shewanella_baltica_OS195 1

Shewanella_baltica_OS155 1

Shewanella_sp._MR-7 2

Shewanella_putrefaciens_200 0

Glaciecola_psychrophila_170 1

Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1

Alteromonas_macleodii_str._'Ionian_Sea_U8' 1

Alteromonas_macleodii_str._'Ionian_Sea_U7' 1

Alteromonas_macleodii_str._'Ionian_Sea_U4' 2

Alteromonas_macleodii_str._'Aegean_Sea_MED64' 0

Alteromonas_macleodii_str._'English_Channel_615' 0

Alteromonas_macleodii_AltDE1 1

Alteromonas_macleodii_str._'English_Channel_673' 0

Alteromonas_macleodii_str._'Balearic_Sea_AD45' 0

Alteromonas_macleodii_str._'Black_Sea_11' 0

Alteromonas_macleodii_ATCC_27126 0

Thalassolituus_oleivorans_MIL-1 1

Stenotrophomonas_maltophilia_D457 1

Stenotrophomonas_maltophilia_JV3 1

Stenotrophomonas_maltophilia_R551-3 2

Xylella_fastidiosa_subsp._fastidiosa_GB514 1

Xylella_fastidiosa_M12 1

Xylella_fastidiosa_Temecula1 1

Xylella_fastidiosa_9a5c 1

Xanthomonas_citri_subsp._citri_Aw12879 0

Xanthomonas_campestris_pv._vesicatoria_str._85-10 3

Xanthomonas_axonopodis_pv._citrumelo_F1 1

Xanthomonas_axonopodis_Xac29-1 1

Xanthomonas_oryzae_pv._oryzicola_BLS256 1

Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1

Xanthomonas_oryzae_pv._oryzae_KACC_10331 1

Xanthomonas_campestris_pv._raphani_756C 1

Xanthomonas_campestris_pv._campestris_str._8004 1

Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1

Thioalkalivibrio_nitratireducens_DSM_14787 1

Coxiella_burnetii_CbuK_Q154 2

Coxiella_burnetii_RSA_331 1

Proteus_mirabilis_BB2000 1

Morganella_morganii_subsp._morganii_KT 1

Edwardsiella_tarda_C07-087 2

Edwardsiella_tarda_FL6-60 2

Rahnella_aquatilis_HX2 3

Yersinia_pseudotuberculosis_PB1/+ 1

Yersinia_pseudotuberculosis_YPIII 2

Yersinia_pseudotuberculosis_IP_32953 1

Yersinia_pestis_biovar_Microtus_str._91001 2

Yersinia_pestis_A1122 2

Yersinia_pestis_Z176003 2

Yersinia_pestis_D182038 2

Yersinia_pestis_D106004 2

Yersinia_pestis_biovar_Medievalis_str._Harbin_35 2

Yersinia_pestis_Nepal516 2

Yersinia_pestis_Antiqua 2

Yersinia_pestis_Angola 2

Yersinia_pestis_CO92 2

Yersinia_pestis_KIM10+ 2

Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 2

Yersinia_enterocolitica_subsp._palearctica_Y11 2

Serratia_sp._AS13 2

Serratia_plymuthica_S13 2

Serratia_plymuthica_4Rx13 2

Serratia_marcescens_FGI94 2

Serratia_marcescens_WW4 2

Serratia_liquefaciens_ATCC_27592 2

Dickeya_dadantii_Ech586 1

Dickeya_dadantii_3937 2

Pectobacterium_carotovorum_subsp._carotovorum_PCC21 2

Pantoea_ananatis_LMG_5342 2

Pantoea_ananatis_PA13 1

Pantoea_ananatis_AJ13355 2

Erwinia_pyrifoliae_DSM_12163 1

Erwinia_amylovora_CFBP1430 1

Cronobacter_sakazakii_CMCC_45402 2

Cronobacter_sakazakii_SP291 2

Cronobacter_sakazakii_ATCC_BAA-894 2

Raoultella_ornithinolytica_B6 2

Shigella_sonnei_53G 2

Shigella_flexneri_2002017 2

Shigella_flexneri_2a_str._2457T 2

Shigella_flexneri_2a_str._301 2

Shigella_dysenteriae_1617 2

Shigella_boydii_Sb227 2

Salmonella_bongori_N268-08 2

Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 2

Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 2

Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 2

Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 2

Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 3

Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 2

Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 2

Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 2

Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 2

Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 2

Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 2

Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 2

Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 2

Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 2

Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 2

Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 2

Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 2

Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 2

Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 2

Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 2

Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 2

Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 2

Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 3

Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 2

Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 3

Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 2

Salmonella_enterica_serovar_Bovismorbificans_genomics 2

Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 2

Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 2

Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 2

Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 2

Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 2

Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 2

Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 2

Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 2

Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 2

Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 2

Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 2

Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 2

Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 2

Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 2

Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 2

Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 2

Klebsiella_oxytoca_KCTC_1686 2

Klebsiella_pneumoniae_JM45 1

Klebsiella_pneumoniae_CG43 1

Klebsiella_pneumoniae_KCTC_2242 2

Klebsiella_pneumoniae_342 3

Klebsiella_pneumoniae_subsp._pneumoniae_1084 1

Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1

Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1

Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 2

Enterobacter_aerogenes_EA1509E 2

Escherichia_coli_E24377A 2

Escherichia_coli_E._coli_PMV-1 2

Escherichia_coli_JJ1886 2

Escherichia_coli_LY180 2

Escherichia_coli_APEC_O78 2

Escherichia_coli_O7:K1_str._CE10 2

Escherichia_coli_O104:H4_str._2009EL-2050 2

Escherichia_coli_O104:H4_str._2009EL-2071 2

Escherichia_coli_O104:H4_str._2011C-3493 2

Escherichia_coli_NA114 2

Escherichia_coli_P12b 2

Escherichia_coli_str._'clone_D_i2' 2

Escherichia_coli_str._'clone_D_i14' 2

Escherichia_coli_UM146 2

Escherichia_coli_042 2

Escherichia_coli_Xuzhou21 2

Escherichia_coli_IHE3034 2

Escherichia_coli_UMNK88 2

Escherichia_coli_O83:H1_str._NRG_857C 2

Escherichia_coli_ABU_83972 2

Escherichia_coli_KO11FL 2

Escherichia_coli_KO11FL 2

Escherichia_coli_LF82 2

Escherichia_coli_ED1a 2

Escherichia_coli_IAI39 2

Escherichia_coli_UMN026 2

Escherichia_coli_55989 2

Escherichia_coli_S88 2

Escherichia_coli_IAI1 2

Escherichia_coli_W 2

Escherichia_coli_W 2

Escherichia_coli_DH1 2

Escherichia_coli_DH1 2

Escherichia_coli_ATCC_8739 2

Escherichia_coli_BL21(DE3) 2

Escherichia_coli_BL21(DE3) 2

Escherichia_coli_SMS-3-5 2

Escherichia_coli_SE15 2

Escherichia_coli_SE11 2

Escherichia_coli_APEC_O1 3

Escherichia_coli_O103:H2_str._12009 2

Escherichia_coli_UTI89 2

Escherichia_coli_536 2

Escherichia_coli_HS 2

Escherichia_coli_ETEC_H10407 2

Escherichia_coli_O55:H7_str._RM12579 3

Escherichia_coli_O55:H7_str._CB9615 2

Escherichia_coli_O26:H11_str._11368 2

Escherichia_coli_CFT073 2

Escherichia_coli_O111:H-_str._11128 4

Escherichia_coli_O127:H6_str._E2348/69 2

Escherichia_coli_O157:H7_str._TW14359 2

Escherichia_coli_O157:H7_str._EC4115 2

Escherichia_coli_O157:H7_str._Sakai 2

Escherichia_coli_O157:H7_str._EDL933 2

Escherichia_coli_str._K-12_substr._MDS42 2

Escherichia_coli_BW2952 2

Escherichia_coli_str._K-12_substr._MG1655 2

Escherichia_coli_str._K-12_substr._W3110 2

Escherichia_coli_str._K-12_substr._DH10B 2

Escherichia_coli_B_str._REL606 2

Enterobacter_cloacae_SCF1 2

Enterobacter_cloacae_EcWSU1 2

Enterobacter_cloacae_subsp._cloacae_ENHKU01 1

Enterobacter_cloacae_subsp._cloacae_NCTC_9394 1

Enterobacter_cloacae_subsp._cloacae_ATCC_13047 2

Azotobacter_vinelandii_CA6 3

Azotobacter_vinelandii_CA 3

Pseudomonas_denitrificans_ATCC_13867 1

Pseudomonas_syringae_pv._phaseolicola_1448A 3

Pseudomonas_syringae_pv._syringae_B728a 2

Pseudomonas_stutzeri_CCUG_29243 1

Pseudomonas_stutzeri_DSM_4166 2

Pseudomonas_stutzeri_RCH2 2

Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 2

Pseudomonas_monteilii_SB3101 2

Pseudomonas_monteilii_SB3078 2

Pseudomonas_putida_H8234 3

Pseudomonas_putida_HB3267 3

Pseudomonas_putida_NBRC_14164 2

Pseudomonas_putida_DOT-T1E 2

Pseudomonas_putida_S16 2

Pseudomonas_putida_BIRD-1 1

Pseudomonas_putida_W619 3

Pseudomonas_putida_ND6 4

Pseudomonas_putida_KT2440 3

Pseudomonas_putida_GB-1 2

Pseudomonas_protegens_CHA0 3

Pseudomonas_poae_RE*1-1-14 1

Pseudomonas_fluorescens_F113 1

Pseudomonas_fluorescens_A506 1

Pseudomonas_fluorescens_R124 3

Pseudomonas_fluorescens_Pf0-1 2

Pseudomonas_resinovorans_NBRC_106553 2

Pseudomonas_mendocina_NK-01 3

Pseudomonas_aeruginosa_SCV20265 2

Pseudomonas_aeruginosa_MTB-1 1

Pseudomonas_aeruginosa_LES431 1

Pseudomonas_aeruginosa_RP73 1

Pseudomonas_aeruginosa_B136-33 1

Pseudomonas_aeruginosa_PA1R 1

Pseudomonas_aeruginosa_PA1 1

Pseudomonas_aeruginosa_DK2 4

Pseudomonas_aeruginosa_NCGM2.S1 1

Pseudomonas_aeruginosa_M18 1

Pseudomonas_aeruginosa_LESB58 1

Pseudomonas_aeruginosa_PA7 4

Pseudomonas_aeruginosa_PAO1 1

Acinetobacter_genomosp._13TU__RUH2624 1

Acinetobacter_sp.__SH024 1

Acinetobacter_calcoaceticus_ruh2202 1

Acinetobacter_baumannii_1656-2 1

Acinetobacter_baumannii_SDF 1

Acinetobacter_baumannii_ACICU 1

Acinetobacter_johnsonii__SH046 1

Pyrococcus_sp._NA2 1

Natronomonas_moolapensis_8.8.11 1

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Longest transcript per gene
Genome Number

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 2

Oryzias_latipes_69_1 (Japanese medaka) 1

Others
Genome Number

Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 2

NCBI_plasmid_sequences_(Plasmids) 215

NCBI_viral_sequences_(Viral) 18

UniProt__viral_sequences_(Viral) 11

Protein_Data_Bank_(all_PDB_sequenc) 76

STRING_v9.0.5_(STRING) 776

TargetDB__(Targets) 10

Uniprot_2018_03_genome 51156

NCBI_2017_08_genome 79587

PDB_chains_(SCOP_1.75)_(PDB) 18

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