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Home > SCOP hierarchy > Domain combination - 47986,52540,_gap_,52047,_gap_

Domain combinations for 47986,52540,_gap_,52047,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47986 - DEATH domain
52540 - P-loop containing nucleoside triphosphate hydrolases
52047 - RNI-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 63

Pan_troglodytes_76_2.1.4 (Chimpanzee) 4

Gorilla_gorilla_76_3.1 (Western gorilla) 5

Pongo_abelii_76_2 (Sumatran orangutan) 3

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 3

Papio_anubis_76 (Olive baboon) 4

Macaca_mulatta_76_1 (Rhesus monkey) 2

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 3

Microcebus_murinus_76_1 (Gray mouse lemur) 2

Rattus_norvegicus_76_5.0 (Norway rat) 4

Mus_musculus_76_38 (House mouse) 6

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 2

Oryctolagus_cuniculus_76_2 (Rabbit) 3

Sus_scrofa_76_10.2 (Pig) 3

Bos_taurus_76_3.1 (Cattle) 2

Ovis_aries_76_3.1 (Sheep) 3

Vicugna_pacos_76_1 (Alpaca) 1

Tursiops_truncatus_76_1 (Bottlenose dolphin) 2

Ailuropoda_melanoleuca_76_1 (Giant panda) 2

Canis_familiaris_76_3.1 (Dog) 5

Felis_catus_76_6.2 (Domestic cat) 1

Equus_caballus_76_2 (Horse) 1

Myotis_lucifugus_76_2.0 (Little brown bat) 1

Pteropus_vampyrus_76_1 (Large flying fox) 2

Sorex_araneus_76_1 (European shrew) 1

Procavia_capensis_76_1 (Cape rock hyrax) 1

Loxodonta_africana_76_3 (African savanna elephant) 1

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 1

Choloepus_hoffmanni_76_1 (Hoffmann's two-fingered sloth) 1

Lepisosteus_oculatus_76 (Spotted gar) 1

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 0

Capitella_sp._I_ 3

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Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 18

Pan_troglodytes_69_2.1.4 (Chimpanzee) 4

Gorilla_gorilla_69_3.1 (Western gorilla) 4

Pongo_abelii_69_2 (Sumatran orangutan) 3

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 3

Macaca_mulatta_69_1 (Rhesus monkey) 1

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 2

Microcebus_murinus_69_1 (Gray mouse lemur) 2

Rattus_norvegicus_69_3.4 (Norway rat) 2

Mus_musculus_69_38 (House mouse) 4

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 1

Oryctolagus_cuniculus_69_2 (Rabbit) 3

Sus_scrofa_69_10.2 (Pig) 2

Bos_taurus_69_3.1 (Cattle) 2

Vicugna_pacos_69_1 (Alpaca) 1

Tursiops_truncatus_69_1 (Bottlenose dolphin) 2

Ailuropoda_melanoleuca_69_1 (Giant panda) 2

Canis_familiaris_69_3.1 (Dog) 3

Felis_catus_69 (Domestic cat) 2

Equus_caballus_69_2 (Horse) 1

Myotis_lucifugus_69_2.0 (Little brown bat) 1

Pteropus_vampyrus_69_1 (Large flying fox) 2

Sorex_araneus_69_1 (European shrew) 1

Procavia_capensis_69_1 (Cape rock hyrax) 1

Loxodonta_africana_69_3 (African savanna elephant) 1

Choloepus_hoffmanni_69_1 (Hoffmann's two-fingered sloth) 1

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 122

Homo_sapiens__(NCBI_version) (Human) 8

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 4

STRING_v9.0.5_(STRING) 42

TargetDB__(Targets) 2

Uniprot_2018_03_genome 2562

NCBI_2017_08_genome 316

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