SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 48065,50729,50998 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48065 - DBL homology domain (DH-domain)
50729 - PH domain-like
50998 - Quinoprotein alcohol dehydrogenase-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Macaca_mulatta_76_1   (Rhesus monkey)   1
Mus_musculus_76_38   (House mouse)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Oryzias_latipes_76_1   (Japanese medaka)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Lottia_gigantea_   (Owl limpet)   0
Danaus_plexippus_OGS1.0   (Monarch butterfly)   0
Heliconius_melpomene_   (Postman butterfly)   0
Bombyx_mori_   (Domestic silkworm)   0
Nasonia_vitripennis_   (Jewel wasp)   0
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   2
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   0
Linepithema_humile_v1.1   (Argentine ant)   0
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1
Atta_cephalotes_v1.1 0
Camponotus_floridanus_v3.3   (Florida carpenter ant)   0
Tribolium_castaneum_3.0   (Red flour beetle)   0
Acyrthosiphon_pisum_   (Pea aphid)   0
Onchocerca_volvulus_22 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Acropora_digitifera_v1.0 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Oryzias_latipes_69_1   (Japanese medaka)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0

Others
Genome     Number
Loa_loa_v3.3_(Request)   (Eye worm)   0
NCBI_2017_08_genome 4
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 48

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]