SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 48452,_gap_,48452 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48452 - TPR-like
48452 - TPR-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   3
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Pongo_abelii_76_2   (Sumatran orangutan)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Papio_anubis_76   (Olive baboon)   1
Macaca_mulatta_76_1   (Rhesus monkey)   1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   3
Otolemur_garnettii_76_3   (Small-eared galago)   1
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   2
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Ochotona_princeps_76   (American pika)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   1
Bos_taurus_76_3.1   (Cattle)   1
Ovis_aries_76_3.1   (Sheep)   2
Vicugna_pacos_76_1   (Alpaca)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   2
Canis_familiaris_76_3.1   (Dog)   1
Felis_catus_76_6.2   (Domestic cat)   1
Equus_caballus_76_2   (Horse)   1
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Pteropus_vampyrus_76_1   (Large flying fox)   1
Sorex_araneus_76_1   (European shrew)   1
Erinaceus_europaeus_76   (Western European hedgehog)   0
Procavia_capensis_76_1   (Cape rock hyrax)   1
Loxodonta_africana_76_3   (African savanna elephant)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Saccoglossus_kowalevskii_v3.0 1
Petromyzon_marinus_76_7.0   (Sea lamprey)   1
Meleagris_gallopavo_76_2   (Turkey)   1
Gallus_gallus_76_4   (Chicken)   1
Anas_platyrhynchos_76_1.0   (Mallard)   1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   2
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   1
Anolis_carolinensis_76_2.0   (Green anole)   1
Xenopus_laevis_   (African clawed frog)   2
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_76_1   (Coelacanth)   1
Lepisosteus_oculatus_76   (Spotted gar)   1
Gadus_morhua_76_1   (Atlantic cod)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   0
Takifugu_rubripes_76_4   (Torafugu)   2
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Oryzias_latipes_76_1   (Japanese medaka)   0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   2
Astyanax_mexicanus_76   (Mexican tetra)   0
Danio_rerio_76_9   (Zebrafish)   3
Oikopleura_dioica 0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   2
Ciona_intestinalis_76   (Vase tunicate)   2
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1
Adineta_vaga 5
Crassostrea_gigas_22   (Pacific oyster)   3
Lottia_gigantea_   (Owl limpet)   0
Helobdella_robusta_ 0
Capitella_sp._I_ 1
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1
Heliconius_melpomene_   (Postman butterfly)   1
Nasonia_vitripennis_   (Jewel wasp)   0
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1
Linepithema_humile_v1.1   (Argentine ant)   2
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   0
Atta_cephalotes_v1.1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1
Lucilia_cuprina   (Australian sheep blowfly)   1
Drosophila_grimshawi_1.3 2
Drosophila_willistoni_1.3 1
Drosophila_pseudoobscura_2.13 3
Drosophila_persimilis_1.3 2
Drosophila_suzukii 1
Drosophila_yakuba_1.3 1
Drosophila_simulans_1.3 1
Drosophila_melanogaster_76_5   (Fruit fly)   2
Drosophila_erecta_1.3 1
Drosophila_ananassae_1.3 2
Drosophila_virilis_1.2 1
Drosophila_mojavensis_1.3 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   0
Anopheles_darlingi_22   (American malaria mosquito)   0
Anopheles_gambiae_49_3j   (African malaria mosquito)   0
Tribolium_castaneum_3.0   (Red flour beetle)   1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1
Acyrthosiphon_pisum_   (Pea aphid)   1
Rhodnius_prolixus_22 1
Daphnia_pulex_   (Common water flea)   1
Strigamia_maritima_22 1
Sarcoptes_scabiei 1
Tetranychus_urticae_   (Two-spotted spider mite)   1
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Onchocerca_volvulus_22 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   2
Caenorhabditis_brenneri_ 0
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   1
Caenorhabditis_briggsae_2 0
Trichinella_spiralis_22 1
Hymenolepis_microstoma_ 0
Echinococcus_multilocularis_ 0
Echinococcus_granulosus_ 0
Taenia_solium_   (Pork tapeworm)   0
Schistosoma_mansoni_ 0
Mnemiopsis_leidyi   (Sea walnut)   0
Acropora_digitifera_v1.0 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   1
Hydra_vulgaris 1
Amphimedon_queenslandica 3
Trichoplax_adhaerens_ 0
Proterospongia_sp._ATCC_50818_ 1
Monosiga_brevicollis_ 1
Capsaspora_owczarzaki_ATCC_30864_ 1
Conidiobolus_coronatus_NRRL28638_v1.0 1
Mortierella_verticillata_NRRL_6337_ 2
Phycomyces_blakesleeanus_ 1
Mucor_circinelloides_ 1
Rhizomucor_miehei_CAU432_ 1
Malassezia_globosa_CBS_7966_ 0
Sporisorium_reilianum_22 0
Ustilago_maydis_ 0
Mixia_osmundae_IAM_14324_v1.0 0
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 0
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 0
Melampsora_laricis-populina_ 0
Rhodotorula_graminis_WP1_v1.0 0
Sporobolomyces_roseus_IAM_13481_ 0
Microbotryum_violaceum_22 0
Wallemia_sebi_v1.0 0
Sphaerobolus_stellatus_v1.0 0
Piloderma_croceum_F_1598_v1.0 1
Serpula_lacrymans_var._lacrymans_S7.9_ 1
Coniophora_puteana 1
Hydnomerulius_pinastri_v2.0 1
Paxillus_rubicundulus_Ve08.2h10_v1.0 1
Pisolithus_microcarpus_441_v1.0 0
Pisolithus_tinctorius_Marx_270_v1.0 0
Scleroderma_citrinum_Foug_A_v1.0 0
Coprinopsis_cinerea_okayama7_130_v3 0
Pleurotus_ostreatus_   (Oyster mushroom)   0
Amanita_thiersii_Skay4041_v1.0 0
Amanita_muscaria_Koide_v1.0   (Fly agaric)   0
Galerina_marginata_v1.0 0
Hebeloma_cylindrosporum_h7_v2.0 0
Laccaria_bicolor_S238N-H82_ 0
Agaricus_bisporus_var._bisporus_ 0
Schizophyllum_commune_ 0
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Heterobasidion_annosum_ 0
Gloeophyllum_trabeumv1.0 0
Punctularia_strigosozonata_v1.0 0
Sebacina_vermifera_MAFF_305830_v1.0 0
Fomitiporia_mediterranea_v1.0 1
Postia_placenta_ 0
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Fomitopsis_pinicolav1.0 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 2
Phanerochaete_chrysosporium_RP-78_2.1 1
Dichomitus_squalens 1
Trametes_versicolor_v1.0 0
Tremella_mesenterica_   (Witches' butter)   0
Daldinia_eschscholzii_EC12_v1.0 1
Apiospora_montagnei_NRRL_25634_v1.0 2
Magnaporthe_poae_ATCC_64411_22 0
Magnaporthe_grisea_70-15_ 0
Podospora_anserina_ 1
Sporotrichum_thermophile_ATCC_42464_ 0
Thielavia_terrestris_NRRL_8126_ 0
Chaetomium_globosum_CBS_148.51_ 1
Neurospora_tetrasperma_ 1
Neurospora_discreta_FGSC_8579_ 3
Neurospora_crassa_OR74A_ 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1
Verticillium_albo-atrum_VaMs.102_ 0
Verticillium_dahliae_VdLs.17_ 0
Acremonium_alcalophilumv_1.0 1
Glomerella_graminicola_22 1
Fusarium_graminearum_ 0
Nectria_haematococca_mpVI_ 0
Fusarium_oxysporum_f._sp._lycopersici_4286_ 0
Fusarium_verticillioides_7600_ 0
Trichoderma_asperellum_CBS_433.97_v1.0 1
Trichoderma_atroviride_ 1
Trichoderma_citrinoviride_v1.0 0
Trichoderma_reesei_1.2 0
Trichoderma_virens_Gv29-8_ 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 0
Trichoderma_harzianum_CBS_226.95_v1.0 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   0
Botrytis_cinerea_B05.10_ 0
Sclerotinia_sclerotiorum_ 0
Blumeria_graminis_22 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 0
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1
Alternaria_brassicicola_ 1
Cochliobolus_lunatus_m118_v2.0 0
Pyrenophora_teres_f._teres_22 0
Pyrenophora_tritici-repentis_ 1
Stagonospora_nodorum_ 1
Mycosphaerella_graminicola_IPO323_ 0
Zasmidium_cellare_ATCC_36951_v1.0 1
Dothistroma_septosporum 0
Mycosphaerella_fijiensis_CIRAD86_ 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1
Paracoccidioides_brasiliensis_Pb18_ 0
Coccidioides_immitis_RS_ 1
Ajellomyces_dermatitidis_SLH14081_ 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Microsporum_canis_CBS_113480_ 2
Trichophyton_equinum_CBS_127.97_ 1
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_tonsurans_CBS_112818_ 1
Trichophyton_rubrum_CBS_118892_ 1
Uncinocarpus_reesii_1704_ 0
Aspergillus_zonatus_v1.0 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 1
Penicillium_chrysogenum_v1.0 1
Aspergillus_fumigatus_Af293 0
Aspergillus_brasiliensis_v1.0 1
Aspergillus_nidulans_FGSC_A4_ 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 0
Aspergillus_glaucus 0
Neosartorya_fischeri_NRRL_181_ 0
Aspergillus_tubingensis_v1.0 1
Aspergillus_wentii_v1.0 0
Aspergillus_oryzae_RIB40_ 1
Aspergillus_flavus_NRRL3357_ 0
Aspergillus_clavatus_NRRL_1_ 0
Penicillium_marneffei_ATCC_18224_ 0
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   0
Hansenula_polymorpha_v2.0 0
Dekkera_bruxellensis_CBS_2499_v2.0 1
Pichia_membranifaciensv1.0 0
Candida_tanzawaensis_NRRL_Y-17324__v1.0 0
Candida_dubliniensis_CD36_ 0
Candida_tropicalis_MYA-3404_ 0
Candida_parapsilosis_ 0
Candida_albicans_SC5314 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 0
Babjeviella_inositovora_NRRL_Y-12698_v1.0 0
Pichia_stipitis_CBS_6054_ 0
Candida_guilliermondii_ATCC_6260_ 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 0
Wickerhamomyces_anomalus 1
Pichia_pastoris_GS115_ 0
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 0
Candida_lusitaniae_ATCC_42720_ 0
Candida_glabrata_CBS138 0
Kluyveromyces_thermotolerans_CBS_6340 0
Lachancea_kluyveri_ 0
Kluyveromyces_waltii 0
Ashbya_gossypii_ATCC_10895_ 0
Zygosaccharomyces_rouxii_ 0
Saccharomyces_paradoxus_MIT 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   0
Saccharomyces_bayanus_MIT 0
Kluyveromyces_lactis 0
Schizosaccharomyces_cryophilus_OY26_22 0
Schizosaccharomyces_octosporus_yFS286_ 0
Schizosaccharomyces_japonicus_yFS275_ 0
Schizosaccharomyces_pombe   (Fission yeast)   0
Catenaria_anguillulae_PL171_v1.0 1
Allomyces_macrogynus_ATCC_38327_ 0
Spizellomyces_punctatus_DAOM_BR117_ 1
Dictyostelium_discoideum 1
Dictyostelium_purpureum_ 1
Entamoeba_invadens_1.2 1
Selaginella_moellendorffii_ 3
Pinus_taeda   (Loblolly pine)   1
Picea_abies   (Norway spruce)   2
Eucalyptus_grandis_v201   (Rose gum)   3
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1
Gossypium_raimondii_v221 4
Citrus_clementina_v165 2
Citrus_sinensis_v154   (Sweet orange)   2
Thellungiella_halophila_v173 2
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   4
Capsella_rubella_v183 3
Arabidopsis_lyrata_   (Lyrate rockcress)   2
Arabidopsis_thaliana_10   (Thale cress)   2
Carica_papaya_   (Papaya)   1
Medicago_truncatula_   (Barrel medic)   6
Phaseolus_vulgaris_v186   (French bean)   2
Glycine_max_v109   (Soybean)   8
Cucumis_sativus_v122   (Cucumber)   1
Fragaria_vesca_   (Wild strawberry)   1
Malus_domestica_v196   (Apple)   4
Prunus_persica_v139   (Peach)   0
Linum_usitatissimum_v200   (Flax)   2
Manihot_esculenta_v147   (Cassava)   3
Populus_trichocarpa_v156   (Black cottonwood)   3
Vitis_vinifera_   (Wine grape)   2
Mimulus_guttatus_v140   (Spotted monkey flower)   2
Solanum_lycopersicum_v.2.3   (Tomato)   2
Solanum_tuberosum_   (Potato)   2
Actinidia_chinensis_Hongyang_ 1
Aquilegia_coerulea_v195 5
Triticum_urartu_22 2
Triticum_aestivum_22   (Bread wheat)   0
Aegilops_tauschii_22 1
Brachypodium_distachyon_   (Stiff brome)   2
Oryza_barthii_22   (African wild rice)   2
Oryza_meridionalis_22 1
Oryza_glumaepatula_22 1
Oryza_punctata_22 0
Oryza_nivara_22 2
Oryza_brachyantha_22   (Malo sina)   1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1
Oryza_sativa_v193   (Rice)   1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Panicum_virgatum_v202   (Switchgrass)   1
Setaria_italica_v164   (Foxtail millet)   1
Zea_mays_subsp._mays_   (Maize)   3
Zea_mays_v181   (Maize)   3
Sorghum_bicolor_   (Sorghum)   1
Musa_balbisiana   (Balbis banana)   1
Musa_acuminata_22   (Wild Malaysian banana)   2
Amborella_trichopoda_22 2
Physcomitrella_patens 4
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Asterochloris_sp._Cgr/DA1pho_v1.0 2
Chlorella_variabilis_sp._NC64A_ 1
Chlorella_vulgaris_ 0
Volvox_carteri_f._nagariensis_ 0
Volvox_carteri_v199 0
Chlamydomonas_reinhardtii_4.0 0
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 1
Cyanidioschyzon_merolae_strain_10D_22 0
Cyanidioschyzon_merolae 0
Porphyridium_purpureum_02_2012 0
Thecamonas_trahens_ATCC_50062_ 1
Bigelowiella_natans_CCMP2755_22 1
Giardia_lamblia_2.3 1
Leishmania_mexicana_2.4 0
Leishmania_major_strain_Friedlin_ 0
Leishmania_infantum_JPCM5_2.4 0
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 0
Trypanosoma_vivax_ 0
Trypanosoma_cruzi_strain_CL_Brener 0
Trypanosoma_congolense_2.4 0
Trypanosoma_brucei_gambiense_v4.1 0
Trypanosoma_brucei_TREU927_v4.1 0
Ectocarpus_siliculosus 0
Aureococcus_anophagefferens_ 0
Albugo_laibachii_22 0
Pythium_iwayamai_DAOM_BR242034_22 1
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_ultimum_v1.7-2 1
Pythium_aphanidermatum_DAOM_BR444_22 1
Pythium_irregulare_DAOM_BR486_22 0
Pythium_vexans_DAOM_BR484_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 0
Phytophthora_capsici_ 0
Phaeodactylum_tricornutumCCAP_1055/1 0
Thalassiosira_pseudonana_CCMP1335 1
Perkinsus_marinus_ATCC_50983_ 0
Paramecium_tetraurelia_ 1
Tetrahymena_thermophila_SB210_1_ 1
Ichthyophthirius_multifiliis_strain_G5_ 0
Cryptosporidium_hominis 0
Cryptosporidium_muris 0
Cryptosporidium_parvum_Iowa_II 0
Neospora_caninum 0
Toxoplasma_gondii_VEG 1
Toxoplasma_gondii_ME49 1
Toxoplasma_gondii_GT1 1
Theileria_parva__ 1
Theileria_annulata 1
Plasmodium_falciparum_3D7_ 0
Plasmodium_chabaudi_ 0
Symbiodinium_minutum_clade_B1_v1.2 1
Naegleria_gruberi_ 0
Trichomonas_vaginalis_ 0
Guillardia_theta_CCMP2712_v1.0_ 1
Emiliania_huxleyi_CCMP1516_ 1
Acaryochloris_marina_MBIC11017 1
Trichodesmium_erythraeum_IMS101 0
Cyanothece_sp._PCC_8802 0
Rivularia_sp._PCC_7116 1
Catenulispora_acidiphila_DSM_44928 0
Frankia_sp._EAN1pec 0
Kribbella_flavida_DSM_17836 0
Anaerolinea_thermophila_UNI-1 0
Sphaerobacter_thermophilus_DSM_20745 2
Herpetosiphon_aurantiacus_DSM_785 1
Roseiflexus_sp._RS-1 1
Roseiflexus_castenholzii_DSM_13941 0
Chloroflexus_aggregans_DSM_9485 0
Selenomonas_sputigena_ATCC_35185 0
Syntrophobotulus_glycolicus_DSM_8271 0
Paenibacillus_polymyxa_M1 0
Geobacillus_kaustophilus_HTA426 0
Geobacillus_sp._GHH01 0
Geobacillus_thermodenitrificans_NG80-2 0
Bacillus_thuringiensis_str._Al_Hakam 0
Bacillus_cereus_03BB102 0
Candidatus_Cloacamonas_acidaminovorans 0
Gemmatimonas_aurantiaca_T-27 0
Pelodictyon_phaeoclathratiforme_BU-1 0
Chlorobium_phaeobacteroides_DSM_266 0
Chlorobium_phaeovibrioides_DSM_265 0
Chitinophaga_pinensis_DSM_2588 0
Salinibacter_ruber_M8 0
Marivirga_tractuosa_DSM_4126 1
Leadbetterella_byssophila_DSM_17132 1
Cytophaga_hutchinsonii_ATCC_33406 1
Spirosoma_linguale_DSM_74 0
Paludibacter_propionicigenes_WB4 0
Odoribacter_splanchnicus_DSM_20712 0
Bacteroides_thetaiotaomicron_VPI-5482 0
Fluviicola_taffensis_DSM_16823 0
Croceibacter_atlanticus_HTCC2559 1
Candidatus_Protochlamydia_amoebophila_UWE25 0
Parachlamydia_acanthamoebae_UV-7 1
Isosphaera_pallida_ATCC_43644 0
Planctomyces_limnophilus_DSM_3776 0
Rhodopirellula_baltica_SH_1 0
Pirellula_staleyi_DSM_6068 1
Opitutus_terrae_PB90-1 0
Brachyspira_murdochii_DSM_12563 0
Brachyspira_intermedia_PWS/A 0
Brachyspira_pilosicoli_95/1000 0
Brachyspira_hyodysenteriae_WA1 0
Sphaerochaeta_pleomorpha_str._Grapes 0
Treponema_azotonutricium_ZAS-9 1
Treponema_brennaborense_DSM_12168 0
Desulfurispirillum_indicum_S5 0
Calditerrivibrio_nitroreducens_DSM_19672 1
Denitrovibrio_acetiphilus_DSM_12809 0
Deferribacter_desulfuricans_SSM1 1
Candidatus_Chloracidobacterium_thermophilum_B 0
Candidatus_Solibacter_usitatus_Ellin6076 1
Granulicella_tundricola_MP5ACTX9 0
Granulicella_mallensis_MP5ACTX8 0
Candidatus_Koribacter_versatilis_Ellin345 0
Terriglobus_roseus_DSM_18391 1
Leptospirillum_ferrooxidans_C2-3 1
Bdellovibrio_bacteriovorus_HD100 0
Helicobacter_mustelae_12198 0
Helicobacter_pylori_B38 1
Desulfobacca_acetoxidans_DSM_11109 0
Desulfotalea_psychrophila_LSv54 0
Desulfobacterium_autotrophicum_HRM2 1
Desulfovibrio_magneticus_RS-1 0
Geobacter_daltonii_FRC-32 1
Geobacter_sp._M21 1
Geobacter_uraniireducens_Rf4 0
Geobacter_lovleyi_SZ 0
Geobacter_bemidjiensis_Bem 1
Pelobacter_carbinolicus_DSM_2380 0
Haliangium_ochraceum_DSM_14365 0
Sorangium_cellulosum_'So_ce_56' 0
Anaeromyxobacter_sp._Fw109-5 1
Anaeromyxobacter_dehalogenans_2CP-1 0
Stigmatella_aurantiaca_DW4/3-1 0
Corallococcus_coralloides_DSM_2259 0
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 0
Laribacter_hongkongensis_HLHK9 0
Ralstonia_eutropha_JMP134 1
Cupriavidus_taiwanensis_LMG_19424 1
Cupriavidus_metallidurans_CH34 1
Cupriavidus_necator_N-1 1
Ralstonia_eutropha_H16 1
Magnetococcus_marinus_MC-1 1
Sphingobium_japonicum_UT26S 0
Pseudovibrio_sp._FO-BEG1 0
Azospirillum_lipoferum_4B 1
Mesorhizobium_opportunistum_WSM2075 0
Saccharophagus_degradans_2-40 0
Teredinibacter_turnerae_T7901 0
Shewanella_frigidimarina_NCIMB_400 0
Colwellia_psychrerythraea_34H 0
Marinobacter_aquaeolei_VT8 0
Escherichia_fergusonii_ATCC_35469 0
Pseudomonas_fulva_12-X 0
Methanococcoides_burtonii_DSM_6242 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   3
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   1
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   0
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   1
Cryptococcus_neoformans_var._grubii_H99_ 1
Cryptococcus_neoformans_B-3501A_ 0
Cryptococcus_neoformans_JEC21_ 0
Paracoccidioides_brasiliensis_Pb01_ 0
Paracoccidioides_brasiliensis_Pb03_ 0
Coccidioides_immitis_RMSCC_3703_ 1
Coccidioides_immitis_RMSCC_2394_ 0
Coccidioides_immitis_H538.4_ 0
Ajellomyces_dermatitidis_ER-3_ 1
Histoplasma_capsulatum_H143 0
Histoplasma_capsulatum_H88 0
Histoplasma_capsulatum_G186AR 0
Aspergillus_fumigatus_A1163_ 0
Candida_albicans_WO-1_ 0
Saccharomyces_cerevisiae_UC5 0
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_CBS7960 0
Saccharomyces_cerevisiae_YJM269 0
Saccharomyces_cerevisiae_T7 0
Saccharomyces_cerevisiae_VL3 0
Saccharomyces_cerevisiae_Vin13 0
Saccharomyces_cerevisiae_Sigma1278b 0
Saccharomyces_cerevisiae_W303 0
Saccharomyces_cerevisiae_JAY291 0
Saccharomyces_cerevisiae_AWRI1631 0
Saccharomyces_cerevisiae_YPS163 0
Saccharomyces_cerevisiae_CLIB215 0
Saccharomyces_cerevisiae_YJM789_ 0
Saccharomyces_cerevisiae_YJM789 0
Saccharomyces_cerevisiae_RM11-1a 0
Saccharomyces_cerevisiae_RM11-1a_ 0
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   0
Schizosaccharomyces_pombe_972h-_ 0
Batrachochytrium_dendrobatidis_JEL423_ 0
Batrachochytrium_dendrobatidis_JAM81_ 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   2
Hordeum_vulgare_22   (Domesticated barley)   1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1
Trypanosoma_brucei_Lister_427_v4.1 0
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 0
Chamaesiphon_minutus_PCC_6605 1
Crinalium_epipsammum_PCC_9333 0
Oscillatoria_nigro-viridis_PCC_7112 0
Oscillatoria_acuminata_PCC_6304 0
Arthrospira_platensis_NIES-39 0
Cyanothece_sp._PCC_7822 0
Cyanothece_sp._PCC_8801 0
Calothrix_parietina_Calothrix_sp._PCC_6303 0
Mycobacterium_gilvum_Spyr1 1
Chthonomonas_calidirosea_T49 0
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 0
Paenibacillus_polymyxa_SC2 0
Geobacillus_sp._C56-T3 0
Geobacillus_sp._Y412MC52 0
Geobacillus_sp._Y412MC61 0
Bacillus_thuringiensis_HD-789 0
Bacillus_thuringiensis_MC28 0
Bacillus_thuringiensis_serovar_chinensis_CT-43 0
Bacillus_thuringiensis_YBT-1518 0
Bacillus_thuringiensis_Bt407 0
Bacillus_thuringiensis_serovar_konkukian_str._97-27 0
Bacillus_thuringiensis_BMB171 0
Bacillus_thuringiensis_serovar_finitimus_YBT-020 0
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 0
Bacillus_cereus_FRI-35 0
Bacillus_cereus_biovar_anthracis_str._CI 0
Bacillus_cereus_AH820 0
Bacillus_cereus_AH187 0
Bacillus_cereus_G9842 0
Bacillus_cereus_Q1 0
Bacillus_cereus_F837/76 0
Bacillus_cereus_E33L 0
Bacillus_cereus_ATCC_10987 0
Bacillus_anthracis_str._H9401 1
Bacillus_megaterium_WSH-002 0
Salinibacter_ruber_DSM_13855 0
Bacteroides_xylanisolvens_XB1A 1
Psychroflexus_torquis_ATCC_700755 1
Singulisphaera_acidiphila_DSM_18658 0
Brachyspira_pilosicoli_WesB 0
Brachyspira_pilosicoli_B2904 0
Brachyspira_pilosicoli_P43/6/78 0
Bdellovibrio_exovorus_JSS 0
Bdellovibrio_bacteriovorus_str._Tiberius 0
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 0
Campylobacter_jejuni_subsp._jejuni_PT14 0
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 0
Campylobacter_jejuni_subsp._jejuni_S3 0
Campylobacter_jejuni_subsp._jejuni_M1 0
Campylobacter_jejuni_subsp._jejuni_IA3902 0
Campylobacter_jejuni_subsp._jejuni_81116 0
Helicobacter_pylori_UM298 1
Helicobacter_pylori_UM066 1
Helicobacter_pylori_UM037 1
Helicobacter_pylori_UM299 1
Helicobacter_pylori_OK310 1
Helicobacter_pylori_OK113 1
Helicobacter_pylori_Rif2 1
Helicobacter_pylori_Rif1 1
Helicobacter_pylori_HUP-B14 1
Helicobacter_pylori_PeCan18 1
Helicobacter_pylori_Shi169 1
Helicobacter_pylori_Shi112 1
Helicobacter_pylori_XZ274 1
Helicobacter_pylori_Aklavik117 1
Helicobacter_pylori_SNT49 1
Helicobacter_pylori_India7 1
Helicobacter_pylori_Lithuania75 1
Helicobacter_pylori_Cuz20 1
Helicobacter_pylori_G27 1
Helicobacter_pylori_Shi470 1
Helicobacter_pylori_HPAG1 1
Helicobacter_pylori_51 1
Helicobacter_pylori_F32 1
Helicobacter_pylori_26695 1
Helicobacter_pylori_26695 1
Desulfocapsa_sulfexigens_DSM_10523 0
Desulfovibrio_desulfuricans_ND132 1
Geobacter_sp._M18 1
Sorangium_cellulosum_So0157-2 0
Anaeromyxobacter_sp._K 0
Anaeromyxobacter_dehalogenans_2CP-C 0
Myxococcus_stipitatus_DSM_14675 0
Burkholderia_pseudomallei_1710b 0
Burkholderia_mallei_ATCC_23344 0
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1
Glaciecola_psychrophila_170 0
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 0
Alteromonas_macleodii_AltDE1 1
Alteromonas_macleodii_str._'English_Channel_673' 0
Alcanivorax_dieselolei_B5 0
Thalassolituus_oleivorans_MIL-1 0
Escherichia_coli_E24377A 0
Escherichia_coli_LY180 0
Escherichia_coli_P12b 0
Escherichia_coli_042 0
Escherichia_coli_Xuzhou21 0
Escherichia_coli_KO11FL 0
Escherichia_coli_KO11FL 0
Escherichia_coli_W 0
Escherichia_coli_W 0
Escherichia_coli_DH1 0
Escherichia_coli_DH1 0
Escherichia_coli_ATCC_8739 0
Escherichia_coli_SE15 0
Escherichia_coli_ETEC_H10407 0
Escherichia_coli_O55:H7_str._RM12579 0
Escherichia_coli_O55:H7_str._CB9615 0
Escherichia_coli_O26:H11_str._11368 0
Escherichia_coli_O111:H-_str._11128 0
Escherichia_coli_O127:H6_str._E2348/69 0
Escherichia_coli_O157:H7_str._TW14359 0
Escherichia_coli_O157:H7_str._EC4115 0
Escherichia_coli_O157:H7_str._Sakai 0
Escherichia_coli_O157:H7_str._EDL933 0
Escherichia_coli_str._K-12_substr._MDS42 0
Escherichia_coli_BW2952 0
Escherichia_coli_str._K-12_substr._MG1655 0
Escherichia_coli_str._K-12_substr._W3110 0
Escherichia_coli_str._K-12_substr._DH10B 0
Escherichia_coli_B_str._REL606 0
Pseudomonas_aeruginosa_RP73 0
Methanomethylovorans_hollandica_DSM_15978 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Pongo_abelii_69_2   (Sumatran orangutan)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Macaca_mulatta_69_1   (Rhesus monkey)   1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1
Otolemur_garnettii_69_3   (Small-eared galago)   1
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Rattus_norvegicus_69_3.4   (Norway rat)   1
Mus_musculus_69_38   (House mouse)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Ochotona_princeps_69   (American pika)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   1
Bos_taurus_69_3.1   (Cattle)   1
Vicugna_pacos_69_1   (Alpaca)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Canis_familiaris_69_3.1   (Dog)   1
Felis_catus_69   (Domestic cat)   1
Equus_caballus_69_2   (Horse)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Pteropus_vampyrus_69_1   (Large flying fox)   1
Sorex_araneus_69_1   (European shrew)   1
Erinaceus_europaeus_69   (Western European hedgehog)   0
Procavia_capensis_69_1   (Cape rock hyrax)   1
Loxodonta_africana_69_3   (African savanna elephant)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Petromyzon_marinus_69_7.0   (Sea lamprey)   1
Meleagris_gallopavo_69_2   (Turkey)   1
Gallus_gallus_69_2   (Chicken)   1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1
Anolis_carolinensis_69_2.0   (Green anole)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_69_1   (Coelacanth)   1
Gadus_morhua_69_1   (Atlantic cod)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   0
Takifugu_rubripes_69_4   (Torafugu)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Oryzias_latipes_69_1   (Japanese medaka)   0
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1
Danio_rerio_69_9   (Zebrafish)   1
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_69   (Vase tunicate)   2
Drosophila_melanogaster_69_5   (Fruit fly)   1
Caenorhabditis_elegans_69_215   (Roundworm)   1
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   0
Arabidopsis_thaliana_10   (Thale cress)   2

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   4
Homo_sapiens__(NCBI_version)   (Human)   2
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
Loa_loa_v3.3_(Request)   (Eye worm)   1
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   1
Malus_x_domestica_(Duplicate)   (Apple)   4
Ricinus_communis__(Early_assembly)   (Castor bean)   3
Nicotiana_benthamiana_0.4.4_(Early_draft) 4
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   2
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   2
Phoenix_dactylifera__(Early_draft)   (Date palm)   1
NCBI_plasmid_sequences_(Plasmids) 1
STRING_v9.0.5_(STRING) 101
Uniprot_2018_03_genome 8370
NCBI_2017_08_genome 1997
TargetDB__(Targets) 2
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 0
Protein_Data_Bank_(all_PDB_sequenc) 0
Protozoadb_2010_08_(Protozoadb) 4

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