SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 48452,_gap_,50729,90209,90209,90209,90209,_gap_,50729,_gap_,50729,_gap_,50729,50891 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48452 - TPR-like
50729 - PH domain-like
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like
50729 - PH domain-like
50729 - PH domain-like
50729 - PH domain-like
50891 - Cyclophilin-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1

Longest transcript per gene
Genome     Number
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1

Others
Genome     Number
NCBI_2017_08_genome 1
Uniprot_2018_03_genome 172

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]