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Domain combinations for 48576,140741,_gap_,50044 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48576 - Terpenoid synthases
140741 - RUN domain-like
50044 - SH3-domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Otolemur_garnettii_76_3   (Small-eared galago)   0
Rattus_norvegicus_76_5.0   (Norway rat)   0
Cavia_porcellus_76_3   (Domestic guinea pig)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Equus_caballus_76_2   (Horse)   0
Myotis_lucifugus_76_2.0   (Little brown bat)   0
Loxodonta_africana_76_3   (African savanna elephant)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Anolis_carolinensis_76_2.0   (Green anole)   1
Latimeria_chalumnae_76_1   (Coelacanth)   1
Oryzias_latipes_76_1   (Japanese medaka)   1
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1

Longest transcript per gene
Genome     Number
Otolemur_garnettii_69_3   (Small-eared galago)   0
Cavia_porcellus_69_3   (Domestic guinea pig)   0
Bos_taurus_69_3.1   (Cattle)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Equus_caballus_69_2   (Horse)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   0
Anolis_carolinensis_69_2.0   (Green anole)   1
Latimeria_chalumnae_69_1   (Coelacanth)   1
Oryzias_latipes_69_1   (Japanese medaka)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 50

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