Domain combinations for 48726,48726,82895,82895,_gap_,47986 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48726 - Immunoglobulin
48726 - Immunoglobulin
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
47986 - DEATH domain

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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• All genomes
• All eukaryote genomes (domain E)
• All bacterial genomes (domain B+A)
• All eubacterial genomes (domain B)
• All archaeal genomes (domain A)

Groups of genomes may be slower than individual genomes.

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Strains

Genome		Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)	(Tropical clawed frog)	1

Longest transcript per gene

Genome		Number
Homo_sapiens_69_37	(Human)	0
Pan_troglodytes_69_2.1.4	(Chimpanzee)	0
Gorilla_gorilla_69_3.1	(Western gorilla)	1
Pongo_abelii_69_2	(Sumatran orangutan)	1
Nomascus_leucogenys_69_1.0	(Northern white-cheeked gibbon)	1
Macaca_mulatta_69_1	(Rhesus monkey)	0
Callithrix_jacchus_69_3.2.1	(White-tufted-ear marmoset)	2
Otolemur_garnettii_69_3	(Small-eared galago)	2
Microcebus_murinus_69_1	(Gray mouse lemur)	1
Rattus_norvegicus_69_3.4	(Norway rat)	3
Mus_musculus_69_38	(House mouse)	0
Dipodomys_ordii_69_1	(Ord's kangaroo rat)	0
Ictidomys_tridecemlineatus_69_2	(Thirteen-lined ground squirrel)	2
Cavia_porcellus_69_3	(Domestic guinea pig)	2
Oryctolagus_cuniculus_69_2	(Rabbit)	2
Ochotona_princeps_69	(American pika)	0
Sus_scrofa_69_10.2	(Pig)	0
Bos_taurus_69_3.1	(Cattle)	2
Vicugna_pacos_69_1	(Alpaca)	1
Tursiops_truncatus_69_1	(Bottlenose dolphin)	0
Mustela_putorius_furo_69_1.0	(Domestic ferret)	1
Ailuropoda_melanoleuca_69_1	(Giant panda)	2
Canis_familiaris_69_3.1	(Dog)	1
Felis_catus_69	(Domestic cat)	0
Equus_caballus_69_2	(Horse)	4
Myotis_lucifugus_69_2.0	(Little brown bat)	4
Pteropus_vampyrus_69_1	(Large flying fox)	1
Procavia_capensis_69_1	(Cape rock hyrax)	0
Loxodonta_africana_69_3	(African savanna elephant)	2
Dasypus_novemcinctus_69_2	(Nine-banded armadillo)	1
Sarcophilus_harrisii_69_7.0	(Tasmanian devil)	2
Monodelphis_domestica_69_5	(Gray short-tailed opossum)	0
Ornithorhynchus_anatinus_69_5	(Platypus)	0
Petromyzon_marinus_69_7.0	(Sea lamprey)	1
Meleagris_gallopavo_69_2	(Turkey)	2
Gallus_gallus_69_2	(Chicken)	1
Taeniopygia_guttata_69_3.2.4	(Zebra finch)	4
Pelodiscus_sinensis_69_1.0	(Chinese soft-shelled turtle)	2
Anolis_carolinensis_69_2.0	(Green anole)	3
Xenopus_tropicalis_69_4.2	(Tropical clawed frog)	2
Latimeria_chalumnae_69_1	(Coelacanth)	0
Gadus_morhua_69_1	(Atlantic cod)	4
Tetraodon_nigroviridis_69_8	(Spotted green pufferfish)	3
Takifugu_rubripes_69_4	(Torafugu)	4
Gasterosteus_aculeatus_69_1	(Three-spined stickleback)	5
Oryzias_latipes_69_1	(Japanese medaka)	3
Xiphophorus_maculatus_69_4.4.2	(Southern platyfish)	1
Oreochromis_niloticus_69_1.0	(Nile tilapia)	0
Danio_rerio_69_9	(Zebrafish)	2

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Others

Genome		Number
Homo_sapiens_75_37_(old_version_GRC)	(Human)	0
Homo_sapiens__(NCBI_version)	(Human)	0
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)	(House mouse)	0
TargetDB__(Targets)		4
STRING_v9.0.5_(STRING)		45
Uniprot_2018_03_genome		4959
NCBI_2017_08_genome		212

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