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Domain combinations for 49299,49299,49299,49299,_gap_,49299,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49299 - PKD domain
49299 - PKD domain
49299 - PKD domain
49299 - PKD domain
49299 - PKD domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Loxodonta_africana_76_3   (African savanna elephant)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Lepisosteus_oculatus_76   (Spotted gar)   0
Gadus_morhua_76_1   (Atlantic cod)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   0
Takifugu_rubripes_76_4   (Torafugu)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   0
Oryzias_latipes_76_1   (Japanese medaka)   0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Danio_rerio_76_9   (Zebrafish)   0
Ciona_intestinalis_76   (Vase tunicate)   0
Acropora_digitifera_v1.0 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Niastella_koreensis_GR20-10 0
Chitinophaga_pinensis_DSM_2588 0
Pedobacter_heparinus_DSM_2366 0
Methanosarcina_acetivorans_C2A 1
Methanospirillum_hungatei_JF-1 0
Methanoplanus_petrolearius_DSM_11571 0

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Strains
Genome     Number
Stanieria_cyanosphaera_PCC_7437 0
Methanoregula_formicica_Methanoregula_formicicum_SMSP 0

Longest transcript per gene
Genome     Number
Loxodonta_africana_69_3   (African savanna elephant)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Gadus_morhua_69_1   (Atlantic cod)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0
Oryzias_latipes_69_1   (Japanese medaka)   0
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0
Ciona_intestinalis_69   (Vase tunicate)   0

Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 0
STRING_v9.0.5_(STRING) 1
NCBI_2017_08_genome 4
Uniprot_2018_03_genome 95
TargetDB__(Targets) 2

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