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  Home > SCOP hierarchy > Domain combination - 49373,49373,49373,49373,49373,49373,49373,49373,49373

Domain combinations for 49373,49373,49373,49373,49373,49373,49373,49373,49373 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49373 - Invasin/intimin cell-adhesion fragments
49373 - Invasin/intimin cell-adhesion fragments
49373 - Invasin/intimin cell-adhesion fragments
49373 - Invasin/intimin cell-adhesion fragments
49373 - Invasin/intimin cell-adhesion fragments
49373 - Invasin/intimin cell-adhesion fragments
49373 - Invasin/intimin cell-adhesion fragments
49373 - Invasin/intimin cell-adhesion fragments
49373 - Invasin/intimin cell-adhesion fragments

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Beutenbergia_cavernae_DSM_12333 0
Eubacterium_eligens_ATCC_27750 0
Clostridium_cellulovorans_743B 0
Paenibacillus_terrae_HPL-003 1
Paenibacillus_polymyxa_M1 1
Saprospira_grandis_str._Lewin 0
Cytophaga_hutchinsonii_ATCC_33406 0
Sphingobacterium_sp._21 0
Cellulophaga_algicola_DSM_14237 0
Candidatus_Solibacter_usitatus_Ellin6076 0
Granulicella_tundricola_MP5ACTX9 0
Terriglobus_saanensis_SP1PR4 0
Achromobacter_xylosoxidans_A8 0
Vibrio_fischeri_MJ11 0
Photorhabdus_asymbiotica 0
Photorhabdus_luminescens_subsp._laumondii_TTO1 0
Xenorhabdus_bovienii_SS-2004 0
Proteus_mirabilis_HI4320 0
Edwardsiella_ictaluri_93-146 0
Edwardsiella_tarda_EIB202 0
Yersinia_pseudotuberculosis_IP_31758 0
Yersinia_pestis_Pestoides_F 0
Yersinia_enterocolitica_subsp._enterocolitica_8081 0
Erwinia_billingiae_Eb661 0
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 0
Methanoculleus_bourgensis_MS2 0

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Strains
Genome     Number
Paenibacillus_sp._Y412MC10 0
Paenibacillus_polymyxa_CR1 1
Paenibacillus_polymyxa_SC2 1
Paenibacillus_polymyxa_E681 1
Proteus_mirabilis_BB2000 0
Morganella_morganii_subsp._morganii_KT 0
Edwardsiella_tarda_C07-087 0
Edwardsiella_tarda_FL6-60 0
Yersinia_pseudotuberculosis_PB1/+ 0
Yersinia_pseudotuberculosis_YPIII 0
Yersinia_pseudotuberculosis_IP_32953 0
Yersinia_pestis_biovar_Microtus_str._91001 0
Yersinia_pestis_A1122 0
Yersinia_pestis_Z176003 0
Yersinia_pestis_D182038 0
Yersinia_pestis_D106004 0
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 0
Yersinia_pestis_Nepal516 0
Yersinia_pestis_Antiqua 0
Yersinia_pestis_Angola 0
Yersinia_pestis_CO92 0
Yersinia_pestis_KIM10+ 0
Shigella_sonnei_53G 0
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 0
Escherichia_coli_E24377A 0
Escherichia_coli_JJ1886 0
Escherichia_coli_LY180 0
Escherichia_coli_APEC_O78 0
Escherichia_coli_O104:H4_str._2009EL-2050 0
Escherichia_coli_O104:H4_str._2009EL-2071 0
Escherichia_coli_O104:H4_str._2011C-3493 0
Escherichia_coli_NA114 0
Escherichia_coli_P12b 0
Escherichia_coli_042 0
Escherichia_coli_Xuzhou21 0
Escherichia_coli_KO11FL 0
Escherichia_coli_KO11FL 0
Escherichia_coli_ED1a 0
Escherichia_coli_IAI39 0
Escherichia_coli_UMN026 0
Escherichia_coli_55989 0
Escherichia_coli_S88 0
Escherichia_coli_IAI1 0
Escherichia_coli_W 0
Escherichia_coli_W 0
Escherichia_coli_DH1 0
Escherichia_coli_DH1 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_SMS-3-5 0
Escherichia_coli_SE15 0
Escherichia_coli_SE11 0
Escherichia_coli_O103:H2_str._12009 0
Escherichia_coli_536 0
Escherichia_coli_HS 0
Escherichia_coli_O55:H7_str._RM12579 0
Escherichia_coli_O55:H7_str._CB9615 0
Escherichia_coli_O26:H11_str._11368 0
Escherichia_coli_O157:H7_str._TW14359 0
Escherichia_coli_O157:H7_str._EC4115 0
Escherichia_coli_O157:H7_str._Sakai 0
Escherichia_coli_O157:H7_str._EDL933 0
Escherichia_coli_str._K-12_substr._MDS42 0
Escherichia_coli_BW2952 0
Escherichia_coli_str._K-12_substr._MG1655 0
Escherichia_coli_str._K-12_substr._W3110 0
Escherichia_coli_str._K-12_substr._DH10B 0
Escherichia_coli_B_str._REL606 0

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Others
Genome     Number
STRING_v9.0.5_(STRING) 0
Uniprot_2018_03_genome 423
NCBI_2017_08_genome 84

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.