SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > SCOP hierarchy > Domain combination - 49785,49303,51445

Domain combinations for 49785,49303,51445 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49785 - Galactose-binding domain-like
49303 - beta-Galactosidase/glucuronidase domain
51445 - (Trans)glycosidases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

Jump to [ Top of page · Domain combinations in individual genomes ]

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Pongo_abelii_76_2   (Sumatran orangutan)   2
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Papio_anubis_76   (Olive baboon)   2
Macaca_mulatta_76_1   (Rhesus monkey)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_76_3   (Small-eared galago)   1
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   1
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Ochotona_princeps_76   (American pika)   1
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   1
Bos_taurus_76_3.1   (Cattle)   1
Ovis_aries_76_3.1   (Sheep)   0
Vicugna_pacos_76_1   (Alpaca)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Canis_familiaris_76_3.1   (Dog)   1
Felis_catus_76_6.2   (Domestic cat)   1
Equus_caballus_76_2   (Horse)   1
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Pteropus_vampyrus_76_1   (Large flying fox)   1
Erinaceus_europaeus_76   (Western European hedgehog)   0
Procavia_capensis_76_1   (Cape rock hyrax)   1
Loxodonta_africana_76_3   (African savanna elephant)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Saccoglossus_kowalevskii_v3.0 1
Petromyzon_marinus_76_7.0   (Sea lamprey)   0
Meleagris_gallopavo_76_2   (Turkey)   1
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   1
Xenopus_laevis_   (African clawed frog)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_76_1   (Coelacanth)   2
Lepisosteus_oculatus_76   (Spotted gar)   1
Gadus_morhua_76_1   (Atlantic cod)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1
Takifugu_rubripes_76_4   (Torafugu)   4
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   3
Oryzias_latipes_76_1   (Japanese medaka)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   3
Astyanax_mexicanus_76   (Mexican tetra)   1
Danio_rerio_76_9   (Zebrafish)   2
Oikopleura_dioica 0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_76   (Vase tunicate)   2
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   2
Adineta_vaga 3
Octopus_bimaculoides_280 1
Crassostrea_gigas_22   (Pacific oyster)   1
Lottia_gigantea_   (Owl limpet)   2
Helobdella_robusta_ 0
Capitella_sp._I_ 4
Danaus_plexippus_OGS1.0   (Monarch butterfly)   0
Heliconius_melpomene_   (Postman butterfly)   1
Bombyx_mori_   (Domestic silkworm)   0
Nasonia_vitripennis_   (Jewel wasp)   0
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   4
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   0
Linepithema_humile_v1.1   (Argentine ant)   0
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1
Atta_cephalotes_v1.1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   0
Lucilia_cuprina   (Australian sheep blowfly)   1
Drosophila_grimshawi_1.3 0
Drosophila_willistoni_1.3 1
Drosophila_pseudoobscura_2.13 0
Drosophila_persimilis_1.3 0
Drosophila_suzukii 0
Drosophila_yakuba_1.3 0
Drosophila_simulans_1.3 0
Drosophila_sechellia_1.3 0
Drosophila_melanogaster_76_5   (Fruit fly)   0
Drosophila_erecta_1.3 0
Drosophila_ananassae_1.3 1
Drosophila_virilis_1.2 0
Drosophila_mojavensis_1.3 0
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1
Anopheles_darlingi_22   (American malaria mosquito)   0
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   2
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1
Acyrthosiphon_pisum_   (Pea aphid)   2
Rhodnius_prolixus_22 3
Daphnia_pulex_   (Common water flea)   2
Strigamia_maritima_22 0
Sarcoptes_scabiei 1
Tetranychus_urticae_   (Two-spotted spider mite)   1
Pristionchus_pacificus_ 2
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Meloidogyne_hapla_ 1
Onchocerca_volvulus_22 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1
Caenorhabditis_japonica_ 1
Caenorhabditis_brenneri_ 2
Caenorhabditis_remanei_ 1
Caenorhabditis_elegans_76_235   (Roundworm)   1
Caenorhabditis_briggsae_2 1
Trichinella_spiralis_22 0
Hymenolepis_microstoma_ 0
Echinococcus_multilocularis_ 0
Schistosoma_mansoni_ 1
Mnemiopsis_leidyi   (Sea walnut)   0
Acropora_digitifera_v1.0 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   2
Hydra_vulgaris 2
Amphimedon_queenslandica 2
Trichoplax_adhaerens_ 0
Proterospongia_sp._ATCC_50818_ 1
Monosiga_brevicollis_ 1
Mortierella_verticillata_NRRL_6337_ 0
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 0
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 2
Melampsora_laricis-populina_ 0
Rhodotorula_graminis_WP1_v1.0 0
Sporobolomyces_roseus_IAM_13481_ 0
Microbotryum_violaceum_22 0
Wallemia_sebi_v1.0 1
Sphaerobolus_stellatus_v1.0 0
Piloderma_croceum_F_1598_v1.0 0
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Coniophora_puteana 0
Hydnomerulius_pinastri_v2.0 0
Paxillus_rubicundulus_Ve08.2h10_v1.0 0
Pisolithus_microcarpus_441_v1.0 0
Pisolithus_tinctorius_Marx_270_v1.0 0
Scleroderma_citrinum_Foug_A_v1.0 0
Coprinopsis_cinerea_okayama7_130_v3 0
Pleurotus_ostreatus_   (Oyster mushroom)   0
Amanita_thiersii_Skay4041_v1.0 0
Galerina_marginata_v1.0 0
Hebeloma_cylindrosporum_h7_v2.0 0
Laccaria_bicolor_S238N-H82_ 0
Agaricus_bisporus_var._bisporus_ 0
Schizophyllum_commune_ 0
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Heterobasidion_annosum_ 0
Gloeophyllum_trabeumv1.0 0
Punctularia_strigosozonata_v1.0 0
Sebacina_vermifera_MAFF_305830_v1.0 0
Fomitiporia_mediterranea_v1.0 0
Tulasnella_calospora_AL13/4D_v1.0 1
Postia_placenta_ 0
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Phanerochaete_chrysosporium_RP-78_2.1 0
Dichomitus_squalens 0
Trametes_versicolor_v1.0 0
Tremella_mesenterica_   (Witches' butter)   0
Daldinia_eschscholzii_EC12_v1.0 0
Apiospora_montagnei_NRRL_25634_v1.0 0
Magnaporthe_poae_ATCC_64411_22 1
Magnaporthe_grisea_70-15_ 0
Podospora_anserina_ 0
Sporotrichum_thermophile_ATCC_42464_ 0
Thielavia_terrestris_NRRL_8126_ 0
Chaetomium_globosum_CBS_148.51_ 0
Neurospora_tetrasperma_ 0
Neurospora_discreta_FGSC_8579_ 0
Neurospora_crassa_OR74A_ 0
Cryphonectria_parasitica_   (Chestnut blight fungus)   1
Verticillium_albo-atrum_VaMs.102_ 1
Verticillium_dahliae_VdLs.17_ 0
Acremonium_alcalophilumv_1.0 0
Glomerella_graminicola_22 0
Fusarium_graminearum_ 1
Nectria_haematococca_mpVI_ 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1
Fusarium_verticillioides_7600_ 2
Trichoderma_asperellum_CBS_433.97_v1.0 0
Trichoderma_atroviride_ 0
Trichoderma_citrinoviride_v1.0 0
Trichoderma_reesei_1.2 0
Trichoderma_virens_Gv29-8_ 0
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1
Trichoderma_harzianum_CBS_226.95_v1.0 0
Amorphotheca_resinae_v1.0   (Creosote fungus)   0
Botrytis_cinerea_B05.10_ 0
Sclerotinia_sclerotiorum_ 0
Didymella_exigua_CBS_183.55_v1.0 0
Leptosphaeria_maculans_22 0
Setosphaeria_turcica_v1.0 0
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 0
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1
Alternaria_brassicicola_ 0
Cochliobolus_lunatus_m118_v2.0 0
Pyrenophora_teres_f._teres_22 1
Pyrenophora_tritici-repentis_ 0
Stagonospora_nodorum_ 1
Mycosphaerella_graminicola_IPO323_ 1
Zasmidium_cellare_ATCC_36951_v1.0 1
Dothistroma_septosporum 0
Septoria_musiva_v1.0 1
Mycosphaerella_fijiensis_CIRAD86_ 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 0
Coccidioides_posadasii_RMSCC_3488_ 0
Coccidioides_immitis_RS_ 0
Ajellomyces_dermatitidis_SLH14081_ 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Microsporum_canis_CBS_113480_ 0
Trichophyton_equinum_CBS_127.97_ 0
Trichophyton_verrucosum_HKI_0517_ 0
Arthroderma_benhamiae_CBS_112371_ 0
Trichophyton_tonsurans_CBS_112818_ 0
Trichophyton_rubrum_CBS_118892_ 0
Uncinocarpus_reesii_1704_ 0
Aspergillus_zonatus_v1.0 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 2
Penicillium_chrysogenum_v1.0 2
Aspergillus_acidus_v1.0 2
Aspergillus_fumigatus_Af293 0
Aspergillus_brasiliensis_v1.0 2
Aspergillus_nidulans_FGSC_A4_ 2
Aspergillus_sydowii_v1.0 2
Aspergillus_versicolor_v1.0 3
Aspergillus_glaucus 1
Aspergillus_carbonarius_ITEM_5010_ 1
Neosartorya_fischeri_NRRL_181_ 1
Aspergillus_terreus_NIH2624_ 2
Aspergillus_tubingensis_v1.0 2
Aspergillus_wentii_v1.0 1
Aspergillus_oryzae_RIB40_ 1
Aspergillus_niger_22 2
Aspergillus_niger_ATCC_1015_ 2
Aspergillus_flavus_NRRL3357_ 2
Aspergillus_clavatus_NRRL_1_ 0
Penicillium_marneffei_ATCC_18224_ 1
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   0
Dekkera_bruxellensis_CBS_2499_v2.0 0
Candida_dubliniensis_CD36_ 0
Candida_tropicalis_MYA-3404_ 0
Candida_parapsilosis_ 0
Candida_albicans_SC5314 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 0
Babjeviella_inositovora_NRRL_Y-12698_v1.0 0
Pichia_stipitis_CBS_6054_ 0
Candida_guilliermondii_ATCC_6260_ 0
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 0
Debaromyces_hansenii 0
Candida_lusitaniae_ATCC_42720_ 1
Kluyveromyces_lactis 0
Spizellomyces_punctatus_DAOM_BR117_ 0
Dictyostelium_discoideum 0
Dictyostelium_purpureum_ 0
Entamoeba_dispar_1.2 1
Entamoeba_invadens_1.2 1
Entamoeba_histolytica_1 1
Selaginella_moellendorffii_ 0
Eucalyptus_grandis_v201   (Rose gum)   0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 1
Citrus_clementina_v165 0
Citrus_sinensis_v154   (Sweet orange)   0
Thellungiella_halophila_v173 0
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   0
Capsella_rubella_v183 0
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Arabidopsis_thaliana_10   (Thale cress)   0
Carica_papaya_   (Papaya)   0
Medicago_truncatula_   (Barrel medic)   0
Phaseolus_vulgaris_v186   (French bean)   0
Glycine_max_v109   (Soybean)   0
Cucumis_sativus_v122   (Cucumber)   0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   0
Prunus_persica_v139   (Peach)   0
Linum_usitatissimum_v200   (Flax)   0
Manihot_esculenta_v147   (Cassava)   0
Populus_trichocarpa_v156   (Black cottonwood)   0
Vitis_vinifera_   (Wine grape)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   0
Solanum_lycopersicum_v.2.3   (Tomato)   0
Solanum_tuberosum_   (Potato)   0
Actinidia_chinensis_Hongyang_ 0
Aquilegia_coerulea_v195 1
Triticum_aestivum_22   (Bread wheat)   0
Aegilops_tauschii_22 0
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_barthii_22   (African wild rice)   0
Oryza_meridionalis_22 0
Oryza_glumaepatula_22 0
Oryza_glaberrima   (African rice)   0
Oryza_punctata_22 0
Oryza_nivara_22 0
Oryza_brachyantha_22   (Malo sina)   0
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   0
Oryza_sativa_v193   (Rice)   0
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   0
Panicum_virgatum_v202   (Switchgrass)   0
Setaria_italica_v164   (Foxtail millet)   0
Zea_mays_v181   (Maize)   0
Sorghum_bicolor_   (Sorghum)   0
Musa_balbisiana   (Balbis banana)   0
Musa_acuminata_22   (Wild Malaysian banana)   0
Amborella_trichopoda_22 0
Physcomitrella_patens 0
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Asterochloris_sp._Cgr/DA1pho_v1.0 1
Chlorella_vulgaris_ 0
Ostreococcus_sp._RCC809_ 0
Ostreococcus_tauri_ 0
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 0
Bigelowiella_natans_CCMP2755_22 0
Aureococcus_anophagefferens_ 2
Albugo_laibachii_22 0
Pythium_iwayamai_DAOM_BR242034_22 0
Pythium_arrhenomanes_ATCC_12531_22 0
Pythium_ultimum_v1.7-2 0
Pythium_aphanidermatum_DAOM_BR444_22 0
Pythium_irregulare_DAOM_BR486_22 0
Pythium_vexans_DAOM_BR484_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 0
Phytophthora_capsici_ 0
Thalassiosira_pseudonana_CCMP1335 0
Perkinsus_marinus_ATCC_50983_ 1
Paramecium_tetraurelia_ 0
Tetrahymena_thermophila_SB210_1_ 0
Ichthyophthirius_multifiliis_strain_G5_ 0
Symbiodinium_minutum_clade_B1_v1.2 0
Trichomonas_vaginalis_ 1
Guillardia_theta_CCMP2712_v1.0_ 1
Emiliania_huxleyi_CCMP1516_ 2
Thermobaculum_terrenum_ATCC_BAA-798 0
Acaryochloris_marina_MBIC11017 0
Gloeocapsa_sp._PCC_7428 0
Nostoc_punctiforme_PCC_73102 1
Conexibacter_woesei_DSM_14684 0
Eggerthella_sp._YY7918 0
Eggerthella_lenta_DSM_2243 0
Slackia_heliotrinireducens_DSM_20476 1
Atopobium_parvulum_DSM_20469 0
Coriobacterium_glomerans_PW2 0
Ilumatobacter_coccineus 1
Modestobacter_marinus 2
Kineococcus_radiotolerans_SRS30216 1
Catenulispora_acidiphila_DSM_44928 2
Frankia_sp._EAN1pec 3
Thermobifida_fusca_YX 0
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1
Streptosporangium_roseum_DSM_43021 1
Streptomyces_coelicolor_A3(2) 1
Streptomyces_sp._PAMC26508 1
Streptomyces_flavogriseus_ATCC_33331 1
Streptomyces_sp._SirexAA-E 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 0
Streptomyces_bingchenggensis_BCW-1 0
Streptomyces_violaceusniger_Tu_4113 1
Streptomyces_avermitilis_MA-4680 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_scabiei_87.22 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Actinosynnema_mirum_DSM_43827 0
Saccharomonospora_viridis_DSM_43017 1
Saccharopolyspora_erythraea_NRRL_2338 0
Amycolatopsis_mediterranei_U32 2
Kribbella_flavida_DSM_17836 2
Propionibacterium_propionicum_F0230a 0
Propionibacterium_acnes_SK137 1
Microlunatus_phosphovorus_NM-1 1
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 0
Verrucosispora_maris_AB-18-032 0
Micromonospora_sp._L5 1
Micromonospora_aurantiaca_ATCC_27029 1
Actinoplanes_sp._N902-109 0
Actinoplanes_sp._SE50/110 0
Actinoplanes_missouriensis_431 0
Segniliparus_rotundus_DSM_44985 0
Tsukamurella_paurometabola_DSM_20162 0
Gordonia_bronchialis_DSM_43247 0
Rhodococcus_jostii_RHA1 0
Rhodococcus_opacus_B4 0
Rhodococcus_erythropolis_PR4 0
Mycobacterium_rhodesiae_NBB3 0
Mycobacterium_chubuense_NBB4 0
Corynebacterium_efficiens_YS-314 1
Sanguibacter_keddieii_DSM_10542 0
Beutenbergia_cavernae_DSM_12333 1
Microbacterium_testaceum_StLB037 0
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1
Jonesia_denitrificans_DSM_20603 0
Brachybacterium_faecium_DSM_4810 1
Xylanimonas_cellulosilytica_DSM_15894 0
Cellulomonas_fimi_ATCC_484 0
[Cellvibrio]_gilvus_ATCC_13127 0
Arthrobacter_phenanthrenivorans_Sphe3 0
Arthrobacter_chlorophenolicus_A6 0
Arthrobacter_aurescens_TC1 1
Arthrobacter_arilaitensis_Re117 0
Kocuria_rhizophila_DC2201 0
Arthrobacter_sp._Rue61a 1
Arthrobacter_sp._FB24 0
Renibacterium_salmoninarum_ATCC_33209 1
Bifidobacterium_longum_subsp._longum_JDM301 0
Bifidobacterium_animalis_subsp._lactis_Bl-04 0
Bifidobacterium_dentium_Bd1 0
Bifidobacterium_breve_ACS-071-V-Sch8b 0
Bifidobacterium_bifidum_S17 0
Bifidobacterium_adolescentis_ATCC_15703 0
Arcanobacterium_haemolyticum_DSM_20595 0
Mobiluncus_curtisii_ATCC_43063 1
Actinomyces_sp._F0330 0
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 0
Anaerolinea_thermophila_UNI-1 0
Herpetosiphon_aurantiacus_DSM_785 0
Roseiflexus_sp._RS-1 0
Roseiflexus_castenholzii_DSM_13941 0
Chloroflexus_sp._MS-G 0
Chloroflexus_sp._Y-400-fl 0
Chloroflexus_aggregans_DSM_9485 0
Chloroflexus_aurantiacus_J-10-fl 0
Truepera_radiovictrix_DSM_17093 1
Deinococcus_deserti_VCD115 3
Deinococcus_maricopensis_DSM_21211 2
Deinococcus_geothermalis_DSM_11300 2
Anaerococcus_prevotii_DSM_20548 0
Megamonas_hypermegale 0
Selenomonas_sputigena_ATCC_35185 0
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 0
Erysipelothrix_rhusiopathiae_str._Fujisawa 0
Eubacterium_siraeum 0
Clostridium_cellulolyticum_H10 1
Ethanoligenens_harbinense_YUAN-3 0
Faecalibacterium_prausnitzii 2
Ruminococcus_sp. 0
Ruminococcus_albus_7 0
butyrate-producing_bacterium_SM4/1 0
Desulfosporosinus_acidiphilus_SJ4 0
Desulfosporosinus_orientis_DSM_765 0
Desulfitobacterium_hafniense_Y51 1
Desulfitobacterium_dehalogenans_ATCC_51507 0
Eubacterium_eligens_ATCC_27750 1
Clostridium_saccharolyticum_WM1 1
Clostridium_phytofermentans_ISDg 2
Clostridium_lentocellum_DSM_5427 1
[Ruminococcus]_obeum 0
[Ruminococcus]_torques 0
Eubacterium_rectale_M104/1 1
Eubacterium_rectale_ATCC_33656 1
Coprococcus_sp._ART55/1 0
Roseburia_hominis_A2-183 1
Roseburia_intestinalis 2
Butyrivibrio_proteoclasticus_B316 2
Butyrivibrio_fibrisolvens 1
Candidatus_Arthromitus_sp._SFB-mouse-Japan 0
Clostridium_sp._BNL1100 0
Clostridium_beijerinckii_NCIMB_8052 0
Clostridium_perfringens_ATCC_13124 0
Clostridium_cellulovorans_743B 1
Mahella_australiensis_50-1_BON 2
Caldicellulosiruptor_obsidiansis_OB47 2
Caldicellulosiruptor_kronotskyensis_2002 1
Caldicellulosiruptor_hydrothermalis_108 1
Caldicellulosiruptor_owensensis_OL 0
Caldicellulosiruptor_lactoaceticus_6A 0
Caldicellulosiruptor_kristjanssonii_177R1B 0
Caldicellulosiruptor_saccharolyticus_DSM_8903 0
Caldicellulosiruptor_bescii_DSM_6725 1
Thermoanaerobacterium_xylanolyticum_LX-11 0
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 0
Tepidanaerobacter_acetatoxydans_Re1 0
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 0
Thermoanaerobacter_pseudethanolicus_ATCC_33223 0
Thermoanaerobacter_sp._X514 0
Thermoanaerobacter_italicus_Ab9 0
Thermoanaerobacter_wiegelii_Rt8.B1 0
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 0
Halothermothrix_orenii_H_168 0
Halanaerobium_hydrogeniformans 2
Halanaerobium_praevalens_DSM_2228 0
Carnobacterium_sp._17-4 1
Carnobacterium_sp._WN1359 0
Aerococcus_urinae_ACS-120-V-Col10a 1
Melissococcus_plutonius_DAT561 0
Enterococcus_hirae_ATCC_9790 1
Enterococcus_faecium_Aus0004 1
Enterococcus_faecalis_62 0
Weissella_koreensis_KACC_15510 1
Oenococcus_oeni_PSU-1 0
Leuconostoc_sp._C2 0
Leuconostoc_kimchii_IMSNU_11154 0
Leuconostoc_citreum_KM20 1
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 0
Leuconostoc_gasicomitatum_LMG_18811 0
Lactobacillus_casei_ATCC_334 0
Lactobacillus_kefiranofaciens_ZW3 1
Lactobacillus_crispatus_ST1 1
Lactobacillus_rhamnosus_Lc_705 2
Lactobacillus_salivarius_CECT_5713 0
Lactobacillus_fermentum_IFO_3956 1
Lactobacillus_amylovorus_GRL1118 1
Lactobacillus_sakei_subsp._sakei_23K 1
Lactobacillus_reuteri_DSM_20016 1
Lactobacillus_plantarum_JDM1 1
Lactobacillus_helveticus_DPC_4571 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 0
Lactobacillus_buchneri_NRRL_B-30929 3
Lactobacillus_buchneri 3
Lactobacillus_brevis_ATCC_367 2
Lactobacillus_acidophilus_30SC 1
Pediococcus_pentosaceus_ATCC_25745 1
Streptococcus_sp._I-P16 0
Streptococcus_sp._I-G2 0
Streptococcus_intermedius_JTH08 0
Streptococcus_pseudopneumoniae_IS7493 0
Streptococcus_pasteurianus_ATCC_43144 1
Streptococcus_equi_subsp._equi_4047 1
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 1
Streptococcus_infantarius_subsp._infantarius_CJ18 0
Streptococcus_mitis_B6 0
Streptococcus_uberis_0140J 1
Streptococcus_parasanguinis_ATCC_15912 0
Streptococcus_pyogenes_str._Manfredo 0
Streptococcus_pneumoniae_P1031 0
Streptococcus_agalactiae_A909 1
Streptococcus_thermophilus_LMD-9 0
Streptococcus_suis_P1/7 1
Streptococcus_salivarius_57.I 0
Streptococcus_oralis_Uo5 0
Streptococcus_gordonii_str._Challis_substr._CH1 0
Kyrpidia_tusciae_DSM_2912 0
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 0
Brevibacillus_brevis_NBRC_100599 0
Paenibacillus_sp._JDR-2 8
Paenibacillus_terrae_HPL-003 1
Paenibacillus_mucilaginosus_3016 5
Paenibacillus_polymyxa_M1 1
Bacillus_selenitireducens_MLS10 0
Geobacillus_thermoglucosidasius_C56-YS93 0
Geobacillus_sp._WCH70 0
Geobacillus_thermodenitrificans_NG80-2 1
Halobacillus_halophilus_DSM_2266 1
Bacillus_halodurans_C-125 0
Bacillus_clausii_KSM-K16 1
Bacillus_cellulosilyticus_DSM_2522 2
Bacillus_megaterium_DSM_319 0
Staphylococcus_pseudintermedius_HKU10-03 0
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 1
Staphylococcus_haemolyticus_JCSC1435 1
Staphylococcus_carnosus_subsp._carnosus_TM300 0
Melioribacter_roseus_P3M 0
Ignavibacterium_album_JCM_16511 0
Chloroherpeton_thalassium_ATCC_35110 0
Haliscomenobacter_hydrossis_DSM_1100 1
Niastella_koreensis_GR20-10 3
Chitinophaga_pinensis_DSM_2588 0
Rhodothermus_marinus_DSM_4252 1
Belliella_baltica_DSM_15883 0
Cyclobacterium_marinum_DSM_745 0
Fibrella_aestuarina 0
Leadbetterella_byssophila_DSM_17132 1
Dyadobacter_fermentans_DSM_18053 0
Spirosoma_linguale_DSM_74 2
Runella_slithyformis_DSM_19594 1
Parabacteroides_distasonis_ATCC_8503 2
Tannerella_forsythia_ATCC_43037 2
Paludibacter_propionicigenes_WB4 1
Odoribacter_splanchnicus_DSM_20712 1
Prevotella_melaninogenica_ATCC_25845 0
Prevotella_denticola_F0289 0
Prevotella_ruminicola_23 1
Porphyromonas_gingivalis_ATCC_33277 0
Alistipes_finegoldii_DSM_17242 3
Bacteroides_salanitronis_DSM_18170 0
Bacteroides_helcogenes_P_36-108 2
Bacteroides_vulgatus_ATCC_8482 2
Bacteroides_thetaiotaomicron_VPI-5482 3
Bacteroides_fragilis_YCH46 3
Pedobacter_saltans_DSM_12145 1
Solitalea_canadensis_DSM_3403 1
Pedobacter_heparinus_DSM_2366 1
Sphingobacterium_sp._21 0
Fluviicola_taffensis_DSM_16823 0
Zunongwangia_profunda_SM-A87 0
Gramella_forsetii_KT0803 0
Maribacter_sp._HTCC2170 0
Aequorivita_sublithincola_DSM_14238 0
Zobellia_galactanivorans 0
Muricauda_ruestringensis_DSM_13258 0
Cellulophaga_algicola_DSM_14237 1
Cellulophaga_lytica_DSM_7489 0
Ornithobacterium_rhinotracheale_DSM_15997 0
Capnocytophaga_canimorsus_Cc5 0
Capnocytophaga_ochracea_DSM_7271 0
Flavobacterium_indicum_GPTSA100-9 0
Flavobacterium_johnsoniae_UW101 2
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Phycisphaera_mikurensis_NBRC_102666 1
Planctomyces_brasiliensis_DSM_5305 0
Rhodopirellula_baltica_SH_1 0
Coraliomargarita_akajimensis_DSM_45221 0
Opitutus_terrae_PB90-1 0
Akkermansia_muciniphila_ATCC_BAA-835 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1
Brachyspira_murdochii_DSM_12563 1
Brachyspira_intermedia_PWS/A 1
Brachyspira_pilosicoli_95/1000 0
Brachyspira_hyodysenteriae_WA1 1
Spirochaeta_smaragdinae_DSM_11293 0
Sphaerochaeta_pleomorpha_str._Grapes 0
Sphaerochaeta_globus_str._Buddy 1
Sphaerochaeta_coccoides_DSM_17374 1
Spirochaeta_caldaria_DSM_7334 0
Treponema_azotonutricium_ZAS-9 1
Treponema_primitia_ZAS-2 0
Treponema_brennaborense_DSM_12168 0
Treponema_succinifaciens_DSM_2489 0
Treponema_denticola_ATCC_35405 1
Spirochaeta_thermophila_DSM_6192 0
Petrotoga_mobilis_SJ95 0
Mesotoga_prima_MesG1.Ag.4.2 0
Thermosipho_africanus_TCF52B 0
Thermotoga_lettingae_TMO 0
Thermotoga_thermarum_DSM_5069 1
Thermotoga_sp._RQ2 0
Thermotoga_naphthophila_RKU-10 1
Thermotoga_petrophila_RKU-1 2
Thermotoga_neapolitana_DSM_4359 2
Thermotoga_maritima_MSB8 1
Dictyoglomus_turgidum_DSM_6724 1
Dictyoglomus_thermophilum_H-6-12 1
Candidatus_Solibacter_usitatus_Ellin6076 2
Granulicella_tundricola_MP5ACTX9 0
Granulicella_mallensis_MP5ACTX8 0
Candidatus_Koribacter_versatilis_Ellin345 1
Terriglobus_saanensis_SP1PR4 2
Terriglobus_roseus_DSM_18391 0
Acidobacterium_capsulatum_ATCC_51196 0
Streptobacillus_moniliformis_DSM_12112 1
Sebaldella_termitidis_ATCC_33386 1
Geobacter_sp._M21 1
Geobacter_bemidjiensis_Bem 1
Sorangium_cellulosum_'So_ce_56' 1
Stigmatella_aurantiaca_DW4/3-1 0
Neisseria_lactamica_020-06 0
Burkholderia_rhizoxinica_HKI_454 0
Burkholderia_phytofirmans_PsJN 0
Burkholderia_xenovorans_LB400 0
Ralstonia_eutropha_JMP134 0
Cupriavidus_metallidurans_CH34 0
Ralstonia_eutropha_H16 0
Burkholderia_sp._RPE64 0
Burkholderia_sp._CCGE1002 0
Burkholderia_thailandensis_E264 0
Burkholderia_pseudomallei_1106a 0
Burkholderia_mallei_SAVP1 0
Burkholderia_ambifaria_AMMD 0
Burkholderia_cenocepacia_HI2424 0
Burkholderia_multivorans_ATCC_17616 0
Burkholderia_vietnamiensis_G4 0
Burkholderia_gladioli_BSR3 0
Ramlibacter_tataouinensis_TTB310 1
Nitrosospira_multiformis_ATCC_25196 1
Methylovorus_sp._MP688 0
Methylovorus_glucosetrophus_SIP3-4 0
Asticcacaulis_excentricus_CB_48 1
Brevundimonas_subvibrioides_ATCC_15264 0
Caulobacter_sp._K31 0
Caulobacter_segnis_ATCC_21756 0
Sphingopyxis_alaskensis_RB2256 1
Novosphingobium_sp._PP1Y 0
Novosphingobium_aromaticivorans_DSM_12444 0
Pseudovibrio_sp._FO-BEG1 0
Ruegeria_sp._TM1040 0
Azospirillum_lipoferum_4B 0
Azospirillum_sp._B510 0
Azospirillum_brasilense_Sp245 0
Polymorphum_gilvum_SL003B-26A1 1
Methylobacterium_radiotolerans_JCM_2831 0
Ochrobactrum_anthropi_ATCC_49188 0
Sinorhizobium_fredii_NGR234 0
Sinorhizobium_medicae_WSM419 0
Sinorhizobium_meliloti_AK83 0
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1
Rhizobium_etli_CIAT_652 0
Rhizobium_leguminosarum_bv._viciae_3841 0
Agrobacterium_tumefaciens_str._C58 0
Agrobacterium_radiobacter_K84 0
Agrobacterium_sp._H13-3 0
Agrobacterium_vitis_S4 0
Mesorhizobium_sp._BNC1 0
Pelagibacterium_halotolerans_B2 0
Methylocystis_sp._SC2 0
Saccharophagus_degradans_2-40 0
Teredinibacter_turnerae_T7901 0
Cellvibrio_japonicus_Ueda107 0
Aggregatibacter_aphrophilus_NJ8700 0
Haemophilus_somnus_129PT 1
Gallibacterium_anatis_UMN179 0
Haemophilus_parainfluenzae_T3T1 0
Actinobacillus_succinogenes_130Z 0
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 0
Tolumonas_auensis_DSM_9187 1
Aeromonas_veronii_B565 0
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 0
Vibrio_fischeri_MJ11 0
Vibrio_sp._Ex25 0
Vibrio_harveyi_ATCC_BAA-1116 0
Vibrio_parahaemolyticus_RIMD_2210633 0
Vibrio_anguillarum_775 0
Vibrio_furnissii_NCTC_11218 0
Vibrio_vulnificus_MO6-24/O 0
Vibrio_cholerae_O395 0
Photobacterium_profundum_SS9 0
Psychromonas_ingrahamii_37 0
Psychromonas_sp._CNPT3 0
Shewanella_piezotolerans_WP3 0
Shewanella_loihica_PV-4 0
Shewanella_halifaxensis_HAW-EB4 0
Shewanella_sediminis_HAW-EB3 0
Shewanella_pealeana_ATCC_700345 0
Shewanella_baltica_OS185 0
Shewanella_amazonensis_SB2B 0
Shewanella_violacea_DSS12 0
Pseudoalteromonas_atlantica_T6c 0
Glaciecola_sp._4H-3-7+YE-5 0
Glaciecola_nitratireducens_FR1064 0
Alteromonas_sp._SN2 0
Alteromonas_macleodii_str._'Deep_ecotype' 0
Marinomonas_sp._MWYL1 0
Pseudoxanthomonas_suwonensis_11-1 0
Stenotrophomonas_maltophilia_K279a 0
Xylella_fastidiosa_M23 0
Xanthomonas_axonopodis_pv._citri_str._306 0
Xanthomonas_albilineans_GPE_PC73 0
Xanthomonas_oryzae_pv._oryzae_PXO99A 0
Xanthomonas_campestris_pv._campestris_str._B100 0
Edwardsiella_ictaluri_93-146 1
Edwardsiella_tarda_EIB202 1
Rahnella_sp._Y9602 0
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 0
Yersinia_pseudotuberculosis_IP_31758 0
Yersinia_pestis_Pestoides_F 0
Yersinia_enterocolitica_subsp._enterocolitica_8081 0
Serratia_sp._AS12 0
Serratia_sp._ATCC_39006 0
Serratia_plymuthica_AS9 0
Serratia_proteamaculans_568 0
Dickeya_dadantii_Ech703 0
Dickeya_zeae_Ech1591 0
Pectobacterium_wasabiae_WPP163 0
Pectobacterium_sp._SCC3193 0
Pectobacterium_atrosepticum_SCRI1043 0
Pectobacterium_carotovorum_subsp._carotovorum_PC1 0
Pantoea_sp._At-9b 0
Pantoea_vagans_C9-1 0
Pantoea_ananatis_LMG_20103 0
Erwinia_tasmaniensis_Et1/99 0
Erwinia_billingiae_Eb661 0
Erwinia_amylovora_ATCC_49946 0
Cronobacter_turicensis_z3032 0
Cronobacter_sakazakii_ES15 0
Enterobacteriaceae_bacterium_strain_FGI_57 0
Shigella_sonnei_Ss046 1
Shigella_flexneri_5_str._8401 1
Shigella_dysenteriae_Sd197 0
Shigella_boydii_CDC_3083-94 1
Salmonella_bongori_NCTC_12419 0
Klebsiella_oxytoca_E718 0
Klebsiella_variicola_At-22 0
Klebsiella_pneumoniae_NTUH-K2044 0
Enterobacter_aerogenes_KCTC_2190 0
Escherichia_fergusonii_ATCC_35469 0
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1
Enterobacter_sp._R4-368 0
Enterobacter_sp._638 0
Enterobacter_asburiae_LF7a 0
Enterobacter_cloacae_subsp._dissolvens_SDM 0
Citrobacter_rodentium_ICC168 0
Citrobacter_koseri_ATCC_BAA-895 0
Ignisphaera_aggregans_DSM_17230 1
Sulfolobus_islandicus_Y.N.15.51 1
Sulfolobus_solfataricus_P2 1
Caldivirga_maquilingensis_IC-167 1
Salinarchaeum_sp._Harcht-Bsk1 1
Halopiger_xanaduensis_SH-6 0
Haloterrigena_turkmenica_DSM_5511 1
Halomicrobium_mukohataei_DSM_12286 1
Halorhabdus_utahensis_DSM_12940 2
Haloarcula_hispanica_ATCC_33960 1
Haloarcula_marismortui_ATCC_43049 1
Halalkalicoccus_jeotgali_B3 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   0
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   1
Paracoccidioides_brasiliensis_Pb03_ 0
Coccidioides_posadasii_str._Silveira_ 0
Coccidioides_immitis_RMSCC_2394_ 0
Coccidioides_immitis_H538.4_ 0
Ajellomyces_dermatitidis_ER-3_ 1
Histoplasma_capsulatum_H143 1
Histoplasma_capsulatum_H88 1
Histoplasma_capsulatum_G186AR 1
Aspergillus_fumigatus_A1163_ 0
Candida_albicans_WO-1_ 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Hordeum_vulgare_22   (Domesticated barley)   0
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Crinalium_epipsammum_PCC_9333 1
Oscillatoria_nigro-viridis_PCC_7112 1
Cyanothece_sp._PCC_7822 1
Cyanothece_sp._PCC_7425 1
Cylindrospermum_stagnale_PCC_7417 1
Anabaena_cylindrica_PCC_7122 1
Mycoplasma_cynos_C142 0
Adlercreutzia_equolifaciens_DSM_19450 0
Frankia_sp._EuI1c 2
Nocardiopsis_alba_ATCC_BAA-2165 0
Streptomyces_albus_J1074 0
Streptomyces_rapamycinicus_NRRL_5491 1
Streptomyces_davawensis_JCM_4913 0
Streptomyces_fulvissimus_DSM_40593 0
Streptomyces_venezuelae_ATCC_10712 0
Streptomyces_collinus_Tu_365 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Saccharothrix_espanaensis_DSM_44229 0
Amycolatopsis_mediterranei_RB 2
Amycolatopsis_mediterranei_S699 2
Amycolatopsis_mediterranei_S699 2
Amycolatopsis_orientalis_HCCB10007 1
Propionibacterium_avidum_44067 0
Propionibacterium_acnes_ATCC_11828 1
Propionibacterium_acnes_TypeIA2_P.acn31 1
Propionibacterium_acnes_TypeIA2_P.acn17 1
Propionibacterium_acnes_TypeIA2_P.acn33 1
Propionibacterium_acnes_C1 1
Propionibacterium_acnes_HL096PA1 1
Propionibacterium_acnes_6609 1
Propionibacterium_acnes_266 1
Propionibacterium_acnes_KPA171202 1
Propionibacterium_acidipropionici_ATCC_4875 1
Actinoplanes_friuliensis_DSM_7358 0
Rhodococcus_pyridinivorans_SB3094 0
Rhodococcus_erythropolis_CCM2595 0
Leifsonia_xyli_subsp._cynodontis_DSM_46306 1
Clavibacter_michiganensis_subsp._sepedonicus 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1
Gardnerella_vaginalis_HMP9231 0
Gardnerella_vaginalis_ATCC_14019 0
Bifidobacterium_longum_NCC2705 0
Bifidobacterium_longum_DJO10A 0
Bifidobacterium_longum_subsp._infantis_157F 0
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1
Bifidobacterium_longum_subsp._longum_KACC_91563 0
Bifidobacterium_longum_subsp._longum_BBMN68 0
Bifidobacterium_longum_subsp._longum_F8 0
Bifidobacterium_longum_subsp._longum_JCM_1217 0
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 0
Bifidobacterium_animalis_subsp._lactis_Bl12 0
Bifidobacterium_animalis_subsp._lactis_B420 0
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 0
Bifidobacterium_animalis_subsp._lactis_BLC1 0
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 0
Bifidobacterium_animalis_subsp._lactis_Bi-07 0
Bifidobacterium_animalis_subsp._lactis_V9 0
Bifidobacterium_animalis_subsp._lactis_DSM_10140 0
Bifidobacterium_animalis_subsp._lactis_BB-12 0
Bifidobacterium_animalis_subsp._lactis_AD011 0
Bifidobacterium_breve_UCC2003 2
Bifidobacterium_asteroides_PRL2011 0
Bifidobacterium_bifidum_PRL2010 0
Bifidobacterium_bifidum_BGN4 0
Actinomyces_odontolyticus_ATCC_17982 1
Chthonomonas_calidirosea_T49 0
Deinococcus_peraridilitoris_DSM_19664 3
Erysipelothrix_rhusiopathiae_SY1027 0
Eubacterium_siraeum_V10Sc8a 0
Clostridium_thermocellum_DSM_1313 0
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 1
Faecalibacterium_prausnitzii_L2-6 3
Desulfosporosinus_meridiei_DSM_13257 0
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1
Desulfitobacterium_hafniense_DCB-2 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 0
Coprococcus_catus_GD/7 0
Roseburia_intestinalis_XB6B4 2
Candidatus_Arthromitus_sp._SFB-rat-Yit 0
Candidatus_Arthromitus_sp._SFB-mouse-Yit 0
Clostridium_saccharobutylicum_DSM_13864 0
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 0
Clostridium_perfringens_SM101 0
Clostridium_perfringens_str._13 1
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 0
Thermoanaerobacterium_thermosaccharolyticum_M0795 1
Thermoanaerobacter_sp._X513 0
Halobacteroides_halobius_DSM_5150 0
Melissococcus_plutonius_ATCC_35311 0
Enterococcus_mundtii_QU_25 2
Enterococcus_casseliflavus_EC20 2
Enterococcus_faecium_Aus0085 1
Enterococcus_faecium_NRRL_B-2354 1
Enterococcus_faecium_DO 0
Enterococcus_faecalis_str._Symbioflor_1 0
Enterococcus_faecalis_D32 0
Enterococcus_faecalis_OG1RF 0
Enterococcus_faecalis_V583 0
Leuconostoc_mesenteroides_subsp._mesenteroides_J18 0
Leuconostoc_gelidum_JB7 0
Lactobacillus_paracasei_subsp._paracasei_8700:2 0
Lactobacillus_rhamnosus_LOCK908 1
Lactobacillus_rhamnosus_LOCK900 1
Lactobacillus_rhamnosus_ATCC_8530 1
Lactobacillus_rhamnosus_GG 1
Lactobacillus_rhamnosus_GG 1
Lactobacillus_johnsonii_N6.2 1
Lactobacillus_johnsonii_DPC_6026 1
Lactobacillus_johnsonii_NCC_533 1
Lactobacillus_salivarius_UCC118 0
Lactobacillus_fermentum_F-6 1
Lactobacillus_fermentum_CECT_5716 1
Lactobacillus_amylovorus_GRL_1112 1
Lactobacillus_reuteri_TD1 1
Lactobacillus_reuteri_I5007 1
Lactobacillus_reuteri_JCM_1112 1
Lactobacillus_reuteri_SD2112 1
Lactobacillus_plantarum_16 1
Lactobacillus_plantarum_ZJ316 1
Lactobacillus_plantarum_subsp._plantarum_ST-III 1
Lactobacillus_plantarum_subsp._plantarum_P-8 0
Lactobacillus_plantarum_WCFS1 1
Lactobacillus_helveticus_R0052 1
Lactobacillus_helveticus_H10 1
Lactobacillus_helveticus_CNRZ32 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 0
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842 0
Lactobacillus_delbrueckii_subsp._bulgaricus_2038 0
Lactobacillus_brevis_KB290 2
Lactobacillus_acidophilus_La-14 1
Lactobacillus_acidophilus_NCFM 1
Pediococcus_pentosaceus_SL4 1
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 0
Lactococcus_lactis_subsp._lactis_CV56 0
Lactococcus_lactis_subsp._lactis_KF147 0
Lactococcus_lactis_subsp._lactis_Il1403 0
Streptococcus_constellatus_subsp._pharyngis_C1050 0
Streptococcus_constellatus_subsp._pharyngis_C818 0
Streptococcus_constellatus_subsp._pharyngis_C232 0
Streptococcus_intermedius_B196 0
Streptococcus_intermedius_C270 0
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 1
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 1
Streptococcus_equi_subsp._zooepidemicus 1
Streptococcus_dysgalactiae_subsp._equisimilis_167 2
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 1
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 1
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 1
Streptococcus_oligofermentans_AS_1.3089 0
Streptococcus_iniae_SF1 0
Streptococcus_parasanguinis_FW213 0
Streptococcus_pyogenes_HSC5 0
Streptococcus_pyogenes_A20 0
Streptococcus_pyogenes_MGAS1882 0
Streptococcus_pyogenes_MGAS15252 0
Streptococcus_pyogenes_MGAS10750 0
Streptococcus_pyogenes_MGAS10270 1
Streptococcus_pyogenes_MGAS2096 0
Streptococcus_pyogenes_MGAS9429 0
Streptococcus_pyogenes_MGAS6180 0
Streptococcus_pyogenes_NZ131 0
Streptococcus_pyogenes_MGAS8232 0
Streptococcus_pyogenes_MGAS10394 0
Streptococcus_pyogenes_MGAS315 0
Streptococcus_pyogenes_SSI-1 0
Streptococcus_pyogenes_M1_476 0
Streptococcus_pyogenes_MGAS5005 0
Streptococcus_pyogenes_M1_GAS 0
Streptococcus_pneumoniae_A026 0
Streptococcus_pneumoniae_ST556 0
Streptococcus_pneumoniae_SPNA45 0
Streptococcus_pneumoniae_SPN994039 0
Streptococcus_pneumoniae_SPN994038 0
Streptococcus_pneumoniae_SPN034183 0
Streptococcus_pneumoniae_SPN034156 0
Streptococcus_pneumoniae_INV104 0
Streptococcus_pneumoniae_INV200 0
Streptococcus_pneumoniae_OXC141 0
Streptococcus_pneumoniae_gamPNI0373 0
Streptococcus_pneumoniae_AP200 0
Streptococcus_pneumoniae_ATCC_700669 0
Streptococcus_pneumoniae_TCH8431/19A 0
Streptococcus_pneumoniae_CGSP14 0
Streptococcus_pneumoniae_G54 0
Streptococcus_pneumoniae_JJA 0
Streptococcus_pneumoniae_70585 1
Streptococcus_pneumoniae_Hungary19A-6 0
Streptococcus_pneumoniae_Taiwan19F-14 0
Streptococcus_pneumoniae_D39 0
Streptococcus_pneumoniae_670-6B 0
Streptococcus_pneumoniae_R6 0
Streptococcus_pneumoniae_TIGR4 0
Streptococcus_agalactiae_ILRI112 1
Streptococcus_agalactiae_ILRI005 1
Streptococcus_agalactiae_09mas018883 1
Streptococcus_agalactiae_2-22 1
Streptococcus_agalactiae_GD201008-001 1
Streptococcus_agalactiae_NEM316 1
Streptococcus_agalactiae_2603V/R 1
Streptococcus_thermophilus_MN-ZLW-002 0
Streptococcus_thermophilus_JIM_8232 0
Streptococcus_thermophilus_ND03 0
Streptococcus_thermophilus_CNRZ1066 0
Streptococcus_thermophilus_LMG_18311 0
Streptococcus_suis_T15 1
Streptococcus_suis_TL13 1
Streptococcus_suis_SC070731 1
Streptococcus_suis_S735 1
Streptococcus_suis_ST3 1
Streptococcus_suis_D9 1
Streptococcus_suis_SS12 1
Streptococcus_suis_D12 1
Streptococcus_suis_ST1 1
Streptococcus_suis_A7 1
Streptococcus_suis_JS14 1
Streptococcus_suis_BM407 1
Streptococcus_suis_SC84 1
Streptococcus_suis_GZ1 1
Streptococcus_suis_98HAH33 1
Streptococcus_suis_05ZYH33 1
Streptococcus_salivarius_CCHSS3 0
Streptococcus_salivarius_JIM8777 0
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 0
Thermobacillus_composti_KWC4 3
Paenibacillus_sp._Y412MC10 3
Paenibacillus_mucilaginosus_KNP414 5
Paenibacillus_mucilaginosus_K02 5
Paenibacillus_polymyxa_CR1 1
Paenibacillus_polymyxa_SC2 1
Paenibacillus_polymyxa_E681 0
Geobacillus_sp._C56-T3 1
Geobacillus_sp._Y4.1MC1 0
Geobacillus_sp._Y412MC52 0
Geobacillus_sp._Y412MC61 0
Amphibacillus_xylanus_NBRC_15112 0
Bacillus_infantis_NRRL_B-14911 0
Bacillus_megaterium_WSH-002 0
Bacillus_megaterium_QM_B1551 0
Staphylococcus_pseudintermedius_ED99 0
Staphylococcus_warneri_SG1 1
Rhodothermus_marinus_SG0.5JP17-172 1
Echinicola_vietnamensis_DSM_17526 1
Emticicia_oligotrophica_DSM_17448 0
Prevotella_sp._oral_taxon_299_str._F0039 0
Prevotella_dentalis_DSM_3688 0
Porphyromonas_gingivalis_TDC60 0
Porphyromonas_gingivalis_W83 0
Alistipes_shahii_WAL_8301 5
Bacteroides_xylanisolvens_XB1A 3
Bacteroides_fragilis_638R 3
Bacteroides_fragilis_NCTC_9343 3
Nonlabens_dokdonensis_DSW-6 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Singulisphaera_acidiphila_DSM_18658 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1
Brachyspira_pilosicoli_WesB 1
Brachyspira_pilosicoli_B2904 2
Brachyspira_pilosicoli_P43/6/78 0
Spirochaeta_thermophila_DSM_6578 0
Thermotoga_maritima_MSB8 1
Sorangium_cellulosum_So0157-2 2
Burkholderia_phenoliruptrix_BR3459a 0
Burkholderia_sp._YI23 0
Burkholderia_sp._CCGE1003 0
Burkholderia_sp._CCGE1001 0
Burkholderia_sp._KJ006 0
Burkholderia_thailandensis_MSMB121 0
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 0
Burkholderia_pseudomallei_BPC006 0
Burkholderia_pseudomallei_1026b 0
Burkholderia_pseudomallei_MSHR346 0
Burkholderia_pseudomallei_668 0
Burkholderia_pseudomallei_1710b 0
Burkholderia_pseudomallei_K96243 0
Burkholderia_mallei_NCTC_10229 0
Burkholderia_mallei_NCTC_10247 0
Burkholderia_mallei_ATCC_23344 0
Burkholderia_lata 0
Burkholderia_ambifaria_MC40-6 0
Burkholderia_cenocepacia_MC0-3 0
Burkholderia_cenocepacia_AU_1054 0
Burkholderia_cenocepacia_J2315 0
Burkholderia_multivorans_ATCC_17616 0
Burkholderia_cepacia_GG4 0
Sinorhizobium_fredii_USDA_257 0
Sinorhizobium_fredii_HH103 0
Sinorhizobium_meliloti_2011 0
Sinorhizobium_meliloti_GR4 0
Sinorhizobium_meliloti_Rm41 0
Sinorhizobium_meliloti_SM11 0
Sinorhizobium_meliloti_BL225C 0
Sinorhizobium_meliloti_1021 0
Rhizobium_etli_CFN_42 0
Rhizobium_etli_bv._mimosae_str._Mim1 0
Rhizobium_tropici_CIAT_899 0
Rhizobium_leguminosarum_bv._trifolii_WSM2304 0
Rhizobium_leguminosarum_bv._trifolii_WSM1325 0
Simiduia_agarivorans_SA1_=_DSM_21679 0
Mannheimia_succiniciproducens_MBEL55E 0
Haemophilus_somnus_2336 1
Mannheimia_haemolytica_USMARC_2286 0
Mannheimia_haemolytica_M42548 0
Mannheimia_haemolytica_D174 0
Mannheimia_haemolytica_D153 0
Mannheimia_haemolytica_USDA-ARS-USMARC-183 0
Mannheimia_haemolytica_USDA-ARS-USMARC-185 0
Haemophilus_parasuis_ZJ0906 0
Actinobacillus_suis_H91-0380 0
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 0
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 0
Aeromonas_hydrophila_ML09-119 0
Vibrio_fischeri_ES114 0
Vibrio_sp._EJY3 0
Vibrio_parahaemolyticus_BB22OP 0
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 0
Vibrio_anguillarum_Listonella_anguillarum_M3 0
Vibrio_nigripulchritudo_VibrioScope 0
Vibrio_vulnificus_CMCP6 0
Vibrio_vulnificus_YJ016 0
Vibrio_cholerae_LMA3984-4 0
Vibrio_cholerae_M66-2 0
Vibrio_cholerae_O395 0
Vibrio_cholerae_IEC224 0
Vibrio_cholerae_O1_str._2010EL-1786 0
Vibrio_cholerae_MJ-1236 0
Shewanella_baltica_OS223 0
Glaciecola_psychrophila_170 0
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 0
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U8' 0
Alteromonas_macleodii_str._'Ionian_Sea_U7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U4' 0
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 0
Alteromonas_macleodii_str._'English_Channel_615' 0
Alteromonas_macleodii_AltDE1 0
Alteromonas_macleodii_str._'English_Channel_673' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 0
Alteromonas_macleodii_str._'Black_Sea_11' 0
Alteromonas_macleodii_ATCC_27126 0
Stenotrophomonas_maltophilia_D457 0
Stenotrophomonas_maltophilia_JV3 0
Stenotrophomonas_maltophilia_R551-3 0
Xylella_fastidiosa_subsp._fastidiosa_GB514 0
Xylella_fastidiosa_M12 0
Xylella_fastidiosa_Temecula1 0
Xylella_fastidiosa_9a5c 0
Xanthomonas_citri_subsp._citri_Aw12879 0
Xanthomonas_campestris_pv._vesicatoria_str._85-10 0
Xanthomonas_axonopodis_pv._citrumelo_F1 0
Xanthomonas_axonopodis_Xac29-1 0
Xanthomonas_oryzae_pv._oryzicola_BLS256 0
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 0
Xanthomonas_oryzae_pv._oryzae_KACC_10331 0
Xanthomonas_campestris_pv._raphani_756C 0
Xanthomonas_campestris_pv._campestris_str._8004 0
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 0
Morganella_morganii_subsp._morganii_KT 0
Edwardsiella_tarda_C07-087 1
Edwardsiella_tarda_FL6-60 1
Rahnella_aquatilis_HX2 0
Yersinia_pseudotuberculosis_PB1/+ 0
Yersinia_pseudotuberculosis_YPIII 0
Yersinia_pseudotuberculosis_IP_32953 0
Yersinia_pestis_biovar_Microtus_str._91001 0
Yersinia_pestis_A1122 0
Yersinia_pestis_Z176003 0
Yersinia_pestis_D182038 0
Yersinia_pestis_D106004 0
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 0
Yersinia_pestis_Nepal516 0
Yersinia_pestis_Antiqua 0
Yersinia_pestis_Angola 0
Yersinia_pestis_CO92 0
Yersinia_pestis_KIM10+ 0
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 0
Yersinia_enterocolitica_subsp._palearctica_Y11 0
Serratia_sp._AS13 0
Serratia_plymuthica_S13 0
Serratia_plymuthica_4Rx13 0
Serratia_marcescens_FGI94 0
Serratia_marcescens_WW4 0
Serratia_liquefaciens_ATCC_27592 0
Dickeya_dadantii_Ech586 0
Dickeya_dadantii_3937 0
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 0
Pantoea_ananatis_LMG_5342 0
Pantoea_ananatis_PA13 1
Pantoea_ananatis_AJ13355 0
Erwinia_amylovora_CFBP1430 0
Cronobacter_sakazakii_CMCC_45402 0
Cronobacter_sakazakii_SP291 0
Cronobacter_sakazakii_ATCC_BAA-894 0
Raoultella_ornithinolytica_B6 0
Shigella_sonnei_53G 1
Shigella_flexneri_2002017 1
Shigella_flexneri_2a_str._2457T 1
Shigella_flexneri_2a_str._301 1
Shigella_dysenteriae_1617 1
Shigella_boydii_Sb227 0
Salmonella_bongori_N268-08 0
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 0
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 1
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1
Klebsiella_oxytoca_KCTC_1686 0
Klebsiella_pneumoniae_JM45 0
Klebsiella_pneumoniae_CG43 0
Klebsiella_pneumoniae_KCTC_2242 0
Klebsiella_pneumoniae_342 0
Klebsiella_pneumoniae_subsp._pneumoniae_1084 0
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 0
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1
Enterobacter_aerogenes_EA1509E 0
Escherichia_coli_E24377A 1
Escherichia_coli_E._coli_PMV-1 1
Escherichia_coli_JJ1886 1
Escherichia_coli_LY180 1
Escherichia_coli_APEC_O78 1
Escherichia_coli_O7:K1_str._CE10 1
Escherichia_coli_O104:H4_str._2009EL-2050 1
Escherichia_coli_O104:H4_str._2009EL-2071 1
Escherichia_coli_O104:H4_str._2011C-3493 1
Escherichia_coli_NA114 1
Escherichia_coli_P12b 1
Escherichia_coli_str._'clone_D_i2' 1
Escherichia_coli_str._'clone_D_i14' 1
Escherichia_coli_UM146 1
Escherichia_coli_042 1
Escherichia_coli_Xuzhou21 0
Escherichia_coli_IHE3034 1
Escherichia_coli_UMNK88 1
Escherichia_coli_O83:H1_str._NRG_857C 1
Escherichia_coli_ABU_83972 1
Escherichia_coli_KO11FL 1
Escherichia_coli_KO11FL 1
Escherichia_coli_LF82 1
Escherichia_coli_ED1a 1
Escherichia_coli_IAI39 1
Escherichia_coli_UMN026 1
Escherichia_coli_55989 1
Escherichia_coli_S88 1
Escherichia_coli_IAI1 1
Escherichia_coli_W 1
Escherichia_coli_W 1
Escherichia_coli_DH1 1
Escherichia_coli_DH1 1
Escherichia_coli_ATCC_8739 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_SMS-3-5 1
Escherichia_coli_SE15 1
Escherichia_coli_SE11 1
Escherichia_coli_APEC_O1 1
Escherichia_coli_O103:H2_str._12009 1
Escherichia_coli_UTI89 1
Escherichia_coli_536 1
Escherichia_coli_HS 1
Escherichia_coli_ETEC_H10407 1
Escherichia_coli_O55:H7_str._RM12579 1
Escherichia_coli_O55:H7_str._CB9615 1
Escherichia_coli_O26:H11_str._11368 1
Escherichia_coli_CFT073 1
Escherichia_coli_O111:H-_str._11128 1
Escherichia_coli_O127:H6_str._E2348/69 1
Escherichia_coli_O157:H7_str._TW14359 0
Escherichia_coli_O157:H7_str._EC4115 0
Escherichia_coli_O157:H7_str._Sakai 0
Escherichia_coli_O157:H7_str._EDL933 1
Escherichia_coli_str._K-12_substr._MDS42 1
Escherichia_coli_BW2952 1
Escherichia_coli_str._K-12_substr._MG1655 1
Escherichia_coli_str._K-12_substr._W3110 1
Escherichia_coli_str._K-12_substr._DH10B 1
Escherichia_coli_B_str._REL606 1
Enterobacter_cloacae_SCF1 0
Enterobacter_cloacae_EcWSU1 0
Enterobacter_cloacae_subsp._cloacae_ENHKU01 0
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 0
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 0
Sulfolobus_islandicus_LAL14/1 1
Sulfolobus_islandicus_REY15A 1
Sulfolobus_islandicus_HVE10/4 1
Sulfolobus_islandicus_Y.G.57.14 1
Sulfolobus_islandicus_L.S.2.15 1
Sulfolobus_islandicus_M.16.27 1
Sulfolobus_islandicus_M.14.25 1
Sulfolobus_islandicus_M.16.4 1
Sulfolobus_islandicus_L.D.8.5 1
Halovivax_ruber_XH-70 1
Natrinema_pellirubrum_DSM_15624 1
Natronobacterium_gregoryi_SP2 1
Halorhabdus_tiamatea_SARL4B 2
Haloarcula_hispanica_N601 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Pongo_abelii_69_2   (Sumatran orangutan)   2
Macaca_mulatta_69_1   (Rhesus monkey)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_69_3   (Small-eared galago)   1
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Ochotona_princeps_69   (American pika)   1
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   1
Bos_taurus_69_3.1   (Cattle)   1
Vicugna_pacos_69_1   (Alpaca)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Canis_familiaris_69_3.1   (Dog)   1
Felis_catus_69   (Domestic cat)   1
Equus_caballus_69_2   (Horse)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Pteropus_vampyrus_69_1   (Large flying fox)   1
Erinaceus_europaeus_69   (Western European hedgehog)   0
Procavia_capensis_69_1   (Cape rock hyrax)   1
Loxodonta_africana_69_3   (African savanna elephant)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Petromyzon_marinus_69_7.0   (Sea lamprey)   0
Meleagris_gallopavo_69_2   (Turkey)   1
Gallus_gallus_69_2   (Chicken)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_69_1   (Coelacanth)   1
Gadus_morhua_69_1   (Atlantic cod)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Takifugu_rubripes_69_4   (Torafugu)   2
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Oryzias_latipes_69_1   (Japanese medaka)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   2
Danio_rerio_69_9   (Zebrafish)   2
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_69   (Vase tunicate)   1
Drosophila_melanogaster_69_5   (Fruit fly)   0
Caenorhabditis_elegans_69_215   (Roundworm)   1
Arabidopsis_thaliana_10   (Thale cress)   0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   2
Homo_sapiens__(NCBI_version)   (Human)   1
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
Loa_loa_v3.3_(Request)   (Eye worm)   1
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   0
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
Moniliophthora_perniciosa_FA553__(Genome_survey) 1
Lotus_japonicus__(Early_assembly) 1
Malus_x_domestica_(Duplicate)   (Apple)   0
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 0
NCBI_plasmid_sequences_(Plasmids) 7
UniProt__viral_sequences_(Viral) 1
PDB_chains_(SCOP_1.75)_(PDB) 1
NCBI_viral_sequences_(Viral) 0
TargetDB__(Targets) 5
Protozoadb_2010_08_(Protozoadb) 6
Protein_Data_Bank_(all_PDB_sequenc) 35
STRING_v9.0.5_(STRING) 228
Uniprot_2018_03_genome 35616
NCBI_2017_08_genome 18034

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.