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  Home > SCOP hierarchy > Domain combination - 49785,49303,51445,_gap_,49303

Domain combinations for 49785,49303,51445,_gap_,49303 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49785 - Galactose-binding domain-like
49303 - beta-Galactosidase/glucuronidase domain
51445 - (Trans)glycosidases
49303 - beta-Galactosidase/glucuronidase domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Tupaia_belangeri_76   (Northern tree shrew)   1
Pteropus_vampyrus_76_1   (Large flying fox)   1
Astyanax_mexicanus_76   (Mexican tetra)   1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   3
Lottia_gigantea_   (Owl limpet)   2
Tribolium_castaneum_3.0   (Red flour beetle)   1
Daphnia_pulex_   (Common water flea)   1
Strigamia_maritima_22 1
Proterospongia_sp._ATCC_50818_ 0
Rhodotorula_graminis_WP1_v1.0 1
Sporobolomyces_roseus_IAM_13481_ 1
Microbotryum_violaceum_22 1
Sphaerobolus_stellatus_v1.0 2
Piloderma_croceum_F_1598_v1.0 1
Serpula_lacrymans_var._lacrymans_S7.9_ 1
Coniophora_puteana 1
Hydnomerulius_pinastri_v2.0 1
Paxillus_rubicundulus_Ve08.2h10_v1.0 1
Pisolithus_microcarpus_441_v1.0 1
Pisolithus_tinctorius_Marx_270_v1.0 1
Scleroderma_citrinum_Foug_A_v1.0 1
Coprinopsis_cinerea_okayama7_130_v3 1
Pleurotus_ostreatus_   (Oyster mushroom)   2
Amanita_thiersii_Skay4041_v1.0 1
Galerina_marginata_v1.0 1
Hebeloma_cylindrosporum_h7_v2.0 1
Laccaria_bicolor_S238N-H82_ 1
Agaricus_bisporus_var._bisporus_ 1
Schizophyllum_commune_ 1
Stereum_hirsutum_FP-91666_SS1__v1.0 2
Heterobasidion_annosum_ 2
Gloeophyllum_trabeumv1.0 1
Punctularia_strigosozonata_v1.0 2
Sebacina_vermifera_MAFF_305830_v1.0 1
Fomitiporia_mediterranea_v1.0 1
Tulasnella_calospora_AL13/4D_v1.0 1
Postia_placenta_ 2
Wolfiporia_cocos_MD-104_SS10__v1.0 2
Fomitopsis_pinicolav1.0 2
Fomitopsis_pinicola_FP-58527_SS1_v3.0 2
Phanerochaete_chrysosporium_RP-78_2.1 1
Dichomitus_squalens 2
Trametes_versicolor_v1.0 2
Tremella_mesenterica_   (Witches' butter)   1
Daldinia_eschscholzii_EC12_v1.0 2
Apiospora_montagnei_NRRL_25634_v1.0 2
Magnaporthe_poae_ATCC_64411_22 0
Magnaporthe_grisea_70-15_ 2
Podospora_anserina_ 2
Sporotrichum_thermophile_ATCC_42464_ 2
Thielavia_terrestris_NRRL_8126_ 2
Neurospora_tetrasperma_ 1
Neurospora_discreta_FGSC_8579_ 1
Neurospora_crassa_OR74A_ 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1
Verticillium_albo-atrum_VaMs.102_ 2
Verticillium_dahliae_VdLs.17_ 2
Acremonium_alcalophilumv_1.0 1
Glomerella_graminicola_22 2
Fusarium_graminearum_ 2
Nectria_haematococca_mpVI_ 3
Fusarium_oxysporum_f._sp._lycopersici_4286_ 2
Fusarium_verticillioides_7600_ 2
Trichoderma_asperellum_CBS_433.97_v1.0 4
Trichoderma_atroviride_ 3
Trichoderma_citrinoviride_v1.0 2
Trichoderma_reesei_1.2 2
Trichoderma_virens_Gv29-8_ 4
Trichoderma_longibrachiatum_ATCC_18648_v1.0 2
Trichoderma_harzianum_CBS_226.95_v1.0 4
Amorphotheca_resinae_v1.0   (Creosote fungus)   1
Botrytis_cinerea_B05.10_ 1
Sclerotinia_sclerotiorum_ 1
Didymella_exigua_CBS_183.55_v1.0 1
Leptosphaeria_maculans_22 0
Setosphaeria_turcica_v1.0 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 0
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   2
Cochliobolus_lunatus_m118_v2.0 0
Pyrenophora_tritici-repentis_ 1
Stagonospora_nodorum_ 2
Mycosphaerella_graminicola_IPO323_ 1
Zasmidium_cellare_ATCC_36951_v1.0 1
Dothistroma_septosporum 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1
Coccidioides_posadasii_RMSCC_3488_ 1
Coccidioides_immitis_RS_ 1
Ajellomyces_dermatitidis_SLH14081_ 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1
Microsporum_canis_CBS_113480_ 1
Trichophyton_equinum_CBS_127.97_ 1
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 0
Trichophyton_rubrum_CBS_118892_ 1
Aspergillus_zonatus_v1.0 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 2
Penicillium_chrysogenum_v1.0 2
Aspergillus_acidus_v1.0 1
Aspergillus_fumigatus_Af293 1
Aspergillus_brasiliensis_v1.0 1
Aspergillus_nidulans_FGSC_A4_ 1
Aspergillus_sydowii_v1.0 3
Aspergillus_versicolor_v1.0 3
Aspergillus_glaucus 1
Aspergillus_carbonarius_ITEM_5010_ 1
Neosartorya_fischeri_NRRL_181_ 1
Aspergillus_terreus_NIH2624_ 1
Aspergillus_tubingensis_v1.0 1
Aspergillus_wentii_v1.0 1
Aspergillus_oryzae_RIB40_ 2
Aspergillus_niger_22 1
Aspergillus_flavus_NRRL3357_ 1
Aspergillus_clavatus_NRRL_1_ 1
Penicillium_marneffei_ATCC_18224_ 1
Tuber_melanosporum_Mel28_22 2
Tuber_melanosporum_Vittad_   (Perigord truffle)   2
Dekkera_bruxellensis_CBS_2499_v2.0 1
Candida_parapsilosis_ 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1
Pichia_stipitis_CBS_6054_ 2
Candida_guilliermondii_ATCC_6260_ 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 2
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Chlorella_vulgaris_ 0
Bigelowiella_natans_CCMP2755_22 1
Aureococcus_anophagefferens_ 0
Propionibacterium_acnes_SK137 1
Rhodococcus_jostii_RHA1 1
Rhodococcus_opacus_B4 1
Rhodococcus_erythropolis_PR4 1
Kocuria_rhizophila_DC2201 0
Ruminococcus_sp. 1
Clostridium_saccharolyticum_WM1 1
Clostridium_lentocellum_DSM_5427 1
Roseburia_intestinalis 1
Butyrivibrio_proteoclasticus_B316 1
Mahella_australiensis_50-1_BON 1
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 1
Thermoanaerobacter_italicus_Ab9 1
Thermoanaerobacter_wiegelii_Rt8.B1 1
Paenibacillus_sp._JDR-2 1
Bacillus_cellulosilyticus_DSM_2522 1
Porphyromonas_gingivalis_ATCC_33277 1
Spirochaeta_smaragdinae_DSM_11293 1
Treponema_azotonutricium_ZAS-9 1
Treponema_primitia_ZAS-2 1
Burkholderia_rhizoxinica_HKI_454 0
Ralstonia_eutropha_JMP134 1
Cupriavidus_metallidurans_CH34 1
Ralstonia_eutropha_H16 1
Burkholderia_sp._RPE64 1
Burkholderia_ambifaria_AMMD 1
Burkholderia_cenocepacia_HI2424 1
Burkholderia_multivorans_ATCC_17616 1
Burkholderia_vietnamiensis_G4 1
Burkholderia_gladioli_BSR3 1
Novosphingobium_aromaticivorans_DSM_12444 1
Azospirillum_lipoferum_4B 1
Azospirillum_sp._B510 1
Azospirillum_brasilense_Sp245 1
Polymorphum_gilvum_SL003B-26A1 1
Ochrobactrum_anthropi_ATCC_49188 1
Sinorhizobium_fredii_NGR234 1
Sinorhizobium_medicae_WSM419 1
Sinorhizobium_meliloti_AK83 1
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 2
Rhizobium_etli_CIAT_652 2
Rhizobium_leguminosarum_bv._viciae_3841 1
Agrobacterium_tumefaciens_str._C58 2
Agrobacterium_radiobacter_K84 2
Agrobacterium_sp._H13-3 2
Agrobacterium_vitis_S4 2
Pelagibacterium_halotolerans_B2 1
Salinarchaeum_sp._Harcht-Bsk1 1

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Strains
Genome     Number
Paracoccidioides_brasiliensis_Pb03_ 1
Coccidioides_posadasii_str._Silveira_ 1
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 1
Ajellomyces_dermatitidis_ER-3_ 1
Histoplasma_capsulatum_H88 1
Histoplasma_capsulatum_G186AR 1
Aspergillus_fumigatus_A1163_ 1
Propionibacterium_acnes_ATCC_11828 1
Propionibacterium_acnes_TypeIA2_P.acn31 1
Propionibacterium_acnes_TypeIA2_P.acn17 1
Propionibacterium_acnes_TypeIA2_P.acn33 1
Propionibacterium_acnes_C1 1
Propionibacterium_acnes_HL096PA1 1
Propionibacterium_acnes_6609 1
Propionibacterium_acnes_266 1
Propionibacterium_acnes_KPA171202 1
Rhodococcus_pyridinivorans_SB3094 1
Rhodococcus_erythropolis_CCM2595 1
Deinococcus_peraridilitoris_DSM_19664 1
Roseburia_intestinalis_XB6B4 1
Porphyromonas_gingivalis_TDC60 1
Porphyromonas_gingivalis_W83 1
Bacteroides_xylanisolvens_XB1A 0
Burkholderia_phenoliruptrix_BR3459a 0
Burkholderia_sp._YI23 0
Burkholderia_sp._CCGE1003 0
Burkholderia_sp._CCGE1001 0
Burkholderia_sp._KJ006 1
Burkholderia_lata 1
Burkholderia_ambifaria_MC40-6 1
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Burkholderia_cenocepacia_J2315 1
Burkholderia_multivorans_ATCC_17616 1
Burkholderia_cepacia_GG4 1
Sinorhizobium_fredii_USDA_257 1
Sinorhizobium_fredii_HH103 1
Sinorhizobium_meliloti_2011 1
Sinorhizobium_meliloti_GR4 1
Sinorhizobium_meliloti_Rm41 1
Sinorhizobium_meliloti_SM11 1
Sinorhizobium_meliloti_BL225C 1
Sinorhizobium_meliloti_1021 1
Rhizobium_etli_CFN_42 2
Rhizobium_etli_bv._mimosae_str._Mim1 2
Rhizobium_tropici_CIAT_899 2
Rhizobium_leguminosarum_bv._trifolii_WSM2304 2
Rhizobium_leguminosarum_bv._trifolii_WSM1325 2
Vibrio_vulnificus_YJ016 0

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Longest transcript per gene
Genome     Number
Tupaia_belangeri_69   (Northern tree shrew)   1
Pteropus_vampyrus_69_1   (Large flying fox)   1
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1

Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 6
TargetDB__(Targets) 1
STRING_v9.0.5_(STRING) 67
Uniprot_2018_03_genome 27370
NCBI_2017_08_genome 2693

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.