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Domain combinations for 49854,117281,_gap_,57196,_gap_,57196,57196,_gap_,117281,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49854 - Spermadhesin, CUB domain
117281 - Kelch motif
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
117281 - Kelch motif

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Papio_anubis_76   (Olive baboon)   1
Rattus_norvegicus_76_5.0   (Norway rat)   0
Mus_musculus_76_38   (House mouse)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   1
Canis_familiaris_76_3.1   (Dog)   1
Felis_catus_76_6.2   (Domestic cat)   1

Longest transcript per gene
Genome     Number
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   1
Canis_familiaris_69_3.1   (Dog)   1

Others
Genome     Number
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   0
STRING_v9.0.5_(STRING) 0
Uniprot_2018_03_genome 1104
NCBI_2017_08_genome 64

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