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Home > SCOP hierarchy > Domain combination - 49854,57424,49854,57424,_gap_,57424,_gap_

Domain combinations for 49854,57424,49854,57424,_gap_,57424,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49854 - Spermadhesin, CUB domain
57424 - LDL receptor-like module
49854 - Spermadhesin, CUB domain
57424 - LDL receptor-like module
57424 - LDL receptor-like module

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 1

Microcebus_murinus_76_1 (Gray mouse lemur) 1

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 0

Oryctolagus_cuniculus_76_2 (Rabbit) 1

Sus_scrofa_76_10.2 (Pig) 1

Bos_taurus_76_3.1 (Cattle) 1

Ovis_aries_76_3.1 (Sheep) 1

Tursiops_truncatus_76_1 (Bottlenose dolphin) 1

Ailuropoda_melanoleuca_76_1 (Giant panda) 1

Canis_familiaris_76_3.1 (Dog) 1

Felis_catus_76_6.2 (Domestic cat) 1

Equus_caballus_76_2 (Horse) 1

Pteropus_vampyrus_76_1 (Large flying fox) 1

Erinaceus_europaeus_76 (Western European hedgehog) 1

Loxodonta_africana_76_3 (African savanna elephant) 1

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 2

Macropus_eugenii_76_1.0 (Tammar wallaby) 1

Ornithorhynchus_anatinus_76_5 (Platypus) 1

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 0

Poecilia_formosa_76 (Amazon molly) 0

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Longest transcript per gene
Genome Number

Microcebus_murinus_69_1 (Gray mouse lemur) 1

Oryctolagus_cuniculus_69_2 (Rabbit) 1

Sus_scrofa_69_10.2 (Pig) 1

Bos_taurus_69_3.1 (Cattle) 1

Tursiops_truncatus_69_1 (Bottlenose dolphin) 1

Ailuropoda_melanoleuca_69_1 (Giant panda) 1

Canis_familiaris_69_3.1 (Dog) 1

Felis_catus_69 (Domestic cat) 1

Equus_caballus_69_2 (Horse) 1

Pteropus_vampyrus_69_1 (Large flying fox) 1

Erinaceus_europaeus_69 (Western European hedgehog) 1

Loxodonta_africana_69_3 (African savanna elephant) 1

Dasypus_novemcinctus_69_2 (Nine-banded armadillo) 1

Macropus_eugenii_69_1.0 (Tammar wallaby) 1

Ornithorhynchus_anatinus_69_5 (Platypus) 1

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 0

Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 1

STRING_v9.0.5_(STRING) 7

Uniprot_2018_03_genome 616

NCBI_2017_08_genome 59

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