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Home > SCOP hierarchy > Domain combination - 49854,57535,49854,_gap_,57535,49854,57535,49854,57535,49854,57535,49854,57535,49854,57535,49854,57535,49854,57535,49854,57535,49854,57535,49854,57535,49854,57535,49854,57535,57535,57535,57535,57535,57535,57535,57535,57535,57535,57535,57535,57535,57535,57535,_gap_

Domain combinations for 49854,57535,49854,_gap_,57535,49854,57535,49854,57535,49854,57535,49854,57535,49854,57535,49854,57535,49854,57535,49854,57535,49854,57535,49854,57535,49854,57535,49854,57535,57535,57535,57535,57535,57535,57535,57535,57535,57535,57535,57535,57535,57535,57535,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 1

Pan_troglodytes_76_2.1.4 (Chimpanzee) 0

Gorilla_gorilla_76_3.1 (Western gorilla) 0

Pongo_abelii_76_2 (Sumatran orangutan) 0

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 1

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 0

Otolemur_garnettii_76_3 (Small-eared galago) 0

Mus_musculus_76_38 (House mouse) 0

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 0

Oryctolagus_cuniculus_76_2 (Rabbit) 0

Mustela_putorius_furo_76_1.0 (Domestic ferret) 0

Canis_familiaris_76_3.1 (Dog) 0

Equus_caballus_76_2 (Horse) 0

Myotis_lucifugus_76_2.0 (Little brown bat) 1

Ficedula_albicollis_76_1.0 (Collared flycatcher) 1

Lepisosteus_oculatus_76 (Spotted gar) 1

Takifugu_rubripes_76_4 (Torafugu) 2

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 1

Poecilia_formosa_76 (Amazon molly) 1

Oreochromis_niloticus_76_1.0 (Nile tilapia) 2

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Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 0

Pan_troglodytes_69_2.1.4 (Chimpanzee) 0

Gorilla_gorilla_69_3.1 (Western gorilla) 0

Pongo_abelii_69_2 (Sumatran orangutan) 0

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 0

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 0

Otolemur_garnettii_69_3 (Small-eared galago) 0

Mus_musculus_69_38 (House mouse) 0

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 0

Oryctolagus_cuniculus_69_2 (Rabbit) 0

Mustela_putorius_furo_69_1.0 (Domestic ferret) 0

Canis_familiaris_69_3.1 (Dog) 0

Equus_caballus_69_2 (Horse) 0

Myotis_lucifugus_69_2.0 (Little brown bat) 1

Gallus_gallus_69_2 (Chicken) 1

Takifugu_rubripes_69_4 (Torafugu) 2

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 2

Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 1

Homo_sapiens__(NCBI_version) (Human) 1

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 0

STRING_v9.0.5_(STRING) 5

Uniprot_2018_03_genome 9030

NCBI_2017_08_genome 13

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