SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Home > SCOP hierarchy > Domain combination - 49879,_gap_,57903

Domain combinations for 49879,_gap_,57903 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49879 - SMAD/FHA domain
57903 - FYVE/PHD zinc finger

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 14

Pan_troglodytes_76_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_76_3.1 (Western gorilla) 1

Pongo_abelii_76_2 (Sumatran orangutan) 1

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 2

Papio_anubis_76 (Olive baboon) 1

Macaca_mulatta_76_1 (Rhesus monkey) 1

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 2

Otolemur_garnettii_76_3 (Small-eared galago) 1

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 1

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 1

Oryctolagus_cuniculus_76_2 (Rabbit) 1

Ochotona_princeps_76 (American pika) 1

Sus_scrofa_76_10.2 (Pig) 2

Bos_taurus_76_3.1 (Cattle) 1

Ovis_aries_76_3.1 (Sheep) 1

Tursiops_truncatus_76_1 (Bottlenose dolphin) 1

Mustela_putorius_furo_76_1.0 (Domestic ferret) 1

Ailuropoda_melanoleuca_76_1 (Giant panda) 1

Canis_familiaris_76_3.1 (Dog) 1

Felis_catus_76_6.2 (Domestic cat) 1

Equus_caballus_76_2 (Horse) 1

Myotis_lucifugus_76_2.0 (Little brown bat) 1

Procavia_capensis_76_1 (Cape rock hyrax) 1

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 1

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 1

Saccoglossus_kowalevskii_v3.0 0

Anolis_carolinensis_76_2.0 (Green anole) 1

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 1

Latimeria_chalumnae_76_1 (Coelacanth) 1

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 1

Takifugu_rubripes_76_4 (Torafugu) 2

Oryzias_latipes_76_1 (Japanese medaka) 1

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 1

Poecilia_formosa_76 (Amazon molly) 1

Oreochromis_niloticus_76_1.0 (Nile tilapia) 1

Astyanax_mexicanus_76 (Mexican tetra) 1

Danio_rerio_76_9 (Zebrafish) 1

Lottia_gigantea_ (Owl limpet) 1

Danaus_plexippus_OGS1.0 (Monarch butterfly) 1

Pristionchus_pacificus_ 0

Meloidogyne_incognita_ (Southern root-knot nematode) 1

Onchocerca_volvulus_22 1

Brugia_malayi_WS250 (Agent of lymphatic filariasis) 1

Caenorhabditis_brenneri_ 1

Caenorhabditis_remanei_ 1

Caenorhabditis_briggsae_2 1

Hymenolepis_microstoma_ 1

Echinococcus_multilocularis_ 1

Echinococcus_granulosus_ 1

Taenia_solium_ (Pork tapeworm) 1

Schistosoma_mansoni_ 0

Acropora_digitifera_v1.0 1

Capsaspora_owczarzaki_ATCC_30864_ 0

Coccomyxa_subellipsoidea_sp._C-169_v2 0

Chlorella_variabilis_sp._NC64A_ 0

Ostreococcus_sp._RCC809_ 1

Ostreococcus_lucimarinus_CCE9901_ 1

Ostreococcus_tauri_ 1

Micromonas_sp._RCC299_ 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 1

Ascaris_suum_Victoria/Ghent_ (Pig roundworm) 1

Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 7

Pan_troglodytes_69_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_69_3.1 (Western gorilla) 1

Pongo_abelii_69_2 (Sumatran orangutan) 1

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 1

Otolemur_garnettii_69_3 (Small-eared galago) 1

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 1

Oryctolagus_cuniculus_69_2 (Rabbit) 1

Ochotona_princeps_69 (American pika) 1

Sus_scrofa_69_10.2 (Pig) 1

Bos_taurus_69_3.1 (Cattle) 1

Tursiops_truncatus_69_1 (Bottlenose dolphin) 1

Mustela_putorius_furo_69_1.0 (Domestic ferret) 1

Ailuropoda_melanoleuca_69_1 (Giant panda) 1

Canis_familiaris_69_3.1 (Dog) 1

Felis_catus_69 (Domestic cat) 1

Equus_caballus_69_2 (Horse) 1

Myotis_lucifugus_69_2.0 (Little brown bat) 1

Procavia_capensis_69_1 (Cape rock hyrax) 1

Dasypus_novemcinctus_69_2 (Nine-banded armadillo) 1

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 1

Anolis_carolinensis_69_2.0 (Green anole) 1

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 1

Latimeria_chalumnae_69_1 (Coelacanth) 1

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 1

Takifugu_rubripes_69_4 (Torafugu) 1

Oryzias_latipes_69_1 (Japanese medaka) 1

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 1

Danio_rerio_69_9 (Zebrafish) 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 14

Homo_sapiens__(NCBI_version) (Human) 2

Loa_loa_v3.3_(Request) (Eye worm) 1

Wuchereria_bancrofti_v1.0_(Request) (Agent of lymphatic filariasis) 1

STRING_v9.0.5_(STRING) 31

Uniprot_2018_03_genome 774

NCBI_2017_08_genome 248

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

SEARCH

BROWSE

TOOLS

ABOUT

HELP

Domain combinations for 49879,_gap_,57903 superfamilies in groups of genomes