SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 50044,50044,50044,48065,50729,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50044 - SH3-domain
50044 - SH3-domain
50044 - SH3-domain
48065 - DBL homology domain (DH-domain)
50729 - PH domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Papio_anubis_76   (Olive baboon)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   0
Pristionchus_pacificus_ 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Trichinella_spiralis_22 0

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0

Longest transcript per gene
Genome     Number
Erinaceus_europaeus_69   (Western European hedgehog)   0

Others
Genome     Number
Loa_loa_v3.3_(Request)   (Eye worm)   0
STRING_v9.0.5_(STRING) 0
NCBI_2017_08_genome 0
Uniprot_2018_03_genome 36

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