SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Home > SCOP hierarchy > Domain combination - 50156,52540,51045,51045,50156,_gap_,50156,50156,50156,_gap_,50156,_gap_

Domain combinations for 50156,52540,51045,51045,50156,_gap_,50156,50156,50156,_gap_,50156,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50156 - PDZ domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
51045 - WW domain
51045 - WW domain
50156 - PDZ domain-like
50156 - PDZ domain-like
50156 - PDZ domain-like
50156 - PDZ domain-like
50156 - PDZ domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 1

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 1

Rattus_norvegicus_76_5.0 (Norway rat) 1

Mus_musculus_76_38 (House mouse) 1

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 1

Cavia_porcellus_76_3 (Domestic guinea pig) 1

Sus_scrofa_76_10.2 (Pig) 1

Bos_taurus_76_3.1 (Cattle) 1

Ovis_aries_76_3.1 (Sheep) 1

Mustela_putorius_furo_76_1.0 (Domestic ferret) 1

Ailuropoda_melanoleuca_76_1 (Giant panda) 1

Canis_familiaris_76_3.1 (Dog) 1

Pteropus_vampyrus_76_1 (Large flying fox) 1

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 1

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 1

Anolis_carolinensis_76_2.0 (Green anole) 1

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 1

Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 1

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 1

Rattus_norvegicus_69_3.4 (Norway rat) 1

Mus_musculus_69_38 (House mouse) 1

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 1

Cavia_porcellus_69_3 (Domestic guinea pig) 1

Sus_scrofa_69_10.2 (Pig) 1

Bos_taurus_69_3.1 (Cattle) 1

Mustela_putorius_furo_69_1.0 (Domestic ferret) 1

Ailuropoda_melanoleuca_69_1 (Giant panda) 1

Canis_familiaris_69_3.1 (Dog) 1

Pteropus_vampyrus_69_1 (Large flying fox) 1

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 1

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 1

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 1

Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 1

Homo_sapiens__(NCBI_version) (Human) 1

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 1

Uniprot_2018_03_genome 2795

NCBI_2017_08_genome 125

STRING_v9.0.5_(STRING) 9

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]