SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 50494,49854,49854,50494,_gap_,49854,49854 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50494 - Trypsin-like serine proteases
49854 - Spermadhesin, CUB domain
49854 - Spermadhesin, CUB domain
50494 - Trypsin-like serine proteases
49854 - Spermadhesin, CUB domain
49854 - Spermadhesin, CUB domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Gorilla_gorilla_76_3.1   (Western gorilla)   2
Pongo_abelii_76_2   (Sumatran orangutan)   0
Papio_anubis_76   (Olive baboon)   1
Macaca_mulatta_76_1   (Rhesus monkey)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Felis_catus_76_6.2   (Domestic cat)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Xenopus_laevis_   (African clawed frog)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0

Longest transcript per gene
Genome     Number
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Pongo_abelii_69_2   (Sumatran orangutan)   0
Macaca_mulatta_69_1   (Rhesus monkey)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 299
NCBI_2017_08_genome 8

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]