SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 50494,52540,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50494 - Trypsin-like serine proteases
52540 - P-loop containing nucleoside triphosphate hydrolases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Microcystis_aeruginosa_NIES-843 0
Anabaena_variabilis_ATCC_29413 0
Nostoc_sp._PCC_7524 0
Geodermatophilus_obscurus_DSM_43160 0
Kitasatospora_setae_KM-6054 0
Streptomyces_sp._PAMC26508 1
Streptomyces_flavogriseus_ATCC_33331 1
Streptomyces_sp._SirexAA-E 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_bingchenggensis_BCW-1 2
Streptomyces_violaceusniger_Tu_4113 0
Streptomyces_avermitilis_MA-4680 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_scabiei_87.22 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 2
Actinosynnema_mirum_DSM_43827 0
Micromonospora_aurantiaca_ATCC_27029 0
Actinoplanes_sp._N902-109 1
Haliscomenobacter_hydrossis_DSM_1100 0
Bacteroides_vulgatus_ATCC_8482 1
Bacteroides_thetaiotaomicron_VPI-5482 1
Flavobacterium_johnsoniae_UW101 1
Sorangium_cellulosum_'So_ce_56' 0
Myxococcus_xanthus_DK_1622 0
Leptothrix_cholodnii_SP-6 1
Ralstonia_eutropha_H16 1
Jannaschia_sp._CCS1 0
Rhodospirillum_rubrum_F11 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Cyanothece_sp._ATCC_51142 1
Streptomyces_albus_J1074 1
Streptomyces_davawensis_JCM_4913 2
Streptomyces_fulvissimus_DSM_40593 1
Streptomyces_venezuelae_ATCC_10712 1
Streptomyces_collinus_Tu_365 3
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 2
Nocardia_brasiliensis_ATCC_700358 0
Desulfosporosinus_meridiei_DSM_13257 0
Desulfitobacterium_hafniense_DCB-2 1
Porphyromonas_gingivalis_W83 1
Singulisphaera_acidiphila_DSM_18658 1
Rhodospirillum_rubrum_ATCC_11170 0

Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 1
Uniprot_2018_03_genome 2514
NCBI_2017_08_genome 744
NCBI_viral_sequences_(Viral) 0
UniProt__viral_sequences_(Viral) 3
STRING_v9.0.5_(STRING) 10

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]