SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 50729,_gap_,46785,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50729 - PH domain-like
46785 - "Winged helix" DNA-binding domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Tupaia_belangeri_76   (Northern tree shrew)   1
Vicugna_pacos_76_1   (Alpaca)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Pteropus_vampyrus_76_1   (Large flying fox)   0
Meloidogyne_incognita_   (Southern root-knot nematode)   1
Echinococcus_multilocularis_ 1
Echinococcus_granulosus_ 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 0
Melampsora_laricis-populina_ 1
Rhodotorula_graminis_WP1_v1.0 1
Microbotryum_violaceum_22 1
Sphaerobolus_stellatus_v1.0 0
Piloderma_croceum_F_1598_v1.0 0
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Hydnomerulius_pinastri_v2.0 0
Scleroderma_citrinum_Foug_A_v1.0 0
Coprinopsis_cinerea_okayama7_130_v3 0
Pleurotus_ostreatus_   (Oyster mushroom)   1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   0
Galerina_marginata_v1.0 0
Hebeloma_cylindrosporum_h7_v2.0 0
Laccaria_bicolor_S238N-H82_ 0
Schizophyllum_commune_ 0
Heterobasidion_annosum_ 1
Fomitiporia_mediterranea_v1.0 0
Trichoderma_atroviride_ 0
Sclerotinia_sclerotiorum_ 0
Hansenula_polymorpha_v2.0 1
Candida_dubliniensis_CD36_ 0
Candida_tropicalis_MYA-3404_ 0
Candida_parapsilosis_ 1
Candida_albicans_SC5314 0
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 0
Debaromyces_hansenii 0
Schizosaccharomyces_cryophilus_OY26_22 1
Catenaria_anguillulae_PL171_v1.0 2
Allomyces_macrogynus_ATCC_38327_ 2
Dictyostelium_discoideum 1
Selaginella_moellendorffii_ 1
Fragaria_vesca_   (Wild strawberry)   1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   2
Panicum_virgatum_v202   (Switchgrass)   1
Micromonas_pusilla_CCMP1545_v3.0 1
Bigelowiella_natans_CCMP2755_22 1
Leishmania_mexicana_2.4 1
Leishmania_major_strain_Friedlin_ 1
Leishmania_infantum_JPCM5_2.4 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1
Trypanosoma_vivax_ 1
Trypanosoma_cruzi_strain_CL_Brener 1
Trypanosoma_congolense_2.4 1
Trypanosoma_brucei_gambiense_v4.1 1
Trypanosoma_brucei_TREU927_v4.1 1
Ectocarpus_siliculosus 0
Pythium_iwayamai_DAOM_BR242034_22 0
Pythium_ultimum_v1.7-2 1
Pythium_irregulare_DAOM_BR486_22 0
Hyaloperonospora_arabidopsidis_22 0
Naegleria_gruberi_ 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Cryptococcus_neoformans_var._grubii_H99_ 0
Cryptococcus_neoformans_B-3501A_ 0
Cryptococcus_neoformans_JEC21_ 0
Candida_albicans_WO-1_ 0
Trypanosoma_brucei_Lister_427_v4.1 1

Longest transcript per gene
Genome     Number
Tupaia_belangeri_69   (Northern tree shrew)   1
Vicugna_pacos_69_1   (Alpaca)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Felis_catus_69   (Domestic cat)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0

Others
Genome     Number
TargetDB__(Targets) 2
Protozoadb_2010_08_(Protozoadb) 7
STRING_v9.0.5_(STRING) 3
NCBI_2017_08_genome 31
Uniprot_2018_03_genome 585

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]