SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 50939,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50939 - Sialidases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   8
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Pongo_abelii_76_2   (Sumatran orangutan)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Papio_anubis_76   (Olive baboon)   1
Macaca_mulatta_76_1   (Rhesus monkey)   2
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1
Otolemur_garnettii_76_3   (Small-eared galago)   1
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   2
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Ochotona_princeps_76   (American pika)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   1
Ovis_aries_76_3.1   (Sheep)   0
Vicugna_pacos_76_1   (Alpaca)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Canis_familiaris_76_3.1   (Dog)   0
Felis_catus_76_6.2   (Domestic cat)   1
Equus_caballus_76_2   (Horse)   0
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Pteropus_vampyrus_76_1   (Large flying fox)   0
Procavia_capensis_76_1   (Cape rock hyrax)   0
Loxodonta_africana_76_3   (African savanna elephant)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_76_5   (Platypus)   0
Saccoglossus_kowalevskii_v3.0 1
Meleagris_gallopavo_76_2   (Turkey)   0
Gallus_gallus_76_4   (Chicken)   1
Anas_platyrhynchos_76_1.0   (Mallard)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   1
Anolis_carolinensis_76_2.0   (Green anole)   1
Xenopus_laevis_   (African clawed frog)   1
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_76_1   (Coelacanth)   0
Lepisosteus_oculatus_76   (Spotted gar)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   0
Takifugu_rubripes_76_4   (Torafugu)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   0
Oryzias_latipes_76_1   (Japanese medaka)   0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1
Astyanax_mexicanus_76   (Mexican tetra)   0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   0
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   0
Adineta_vaga 1
Octopus_bimaculoides_280 0
Crassostrea_gigas_22   (Pacific oyster)   0
Helobdella_robusta_ 0
Daphnia_pulex_   (Common water flea)   0
Thelohanellus_kitauei 17
Acropora_digitifera_v1.0 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   1
Hydra_vulgaris 1
Amphimedon_queenslandica 1
Proterospongia_sp._ATCC_50818_ 1
Monosiga_brevicollis_ 1
Mucor_circinelloides_ 0
Sebacina_vermifera_MAFF_305830_v1.0 1
Tulasnella_calospora_AL13/4D_v1.0 0
Apiospora_montagnei_NRRL_25634_v1.0 3
Didymella_exigua_CBS_183.55_v1.0 2
Leptosphaeria_maculans_22 0
Setosphaeria_turcica_v1.0 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1
Cochliobolus_victoriae_FI3_v1.0 1
Cochliobolus_carbonum_26-R-13_v1.0 1
Cochliobolus_lunatus_m118_v2.0 1
Pyrenophora_tritici-repentis_ 1
Stagonospora_nodorum_ 1
Dothistroma_septosporum 1
Aspergillus_nidulans_FGSC_A4_ 1
Aspergillus_versicolor_v1.0 1
Aspergillus_terreus_NIH2624_ 1
Aspergillus_oryzae_RIB40_ 1
Aspergillus_flavus_NRRL3357_ 1
Pichia_pastoris_GS115_ 0
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 2
Vanderwaltozyma_polyspora_DSM_70294_ 0
Lachancea_kluyveri_ 0
Saccharomyces_paradoxus_MIT 0
Saccharomyces_cerevisiae_76   (Baker's yeast)   0
Saccharomyces_bayanus_MIT 1
Vitis_vinifera_   (Wine grape)   1
Coccomyxa_subellipsoidea_sp._C-169_v2 1
Chlorella_variabilis_sp._NC64A_ 0
Chlorella_vulgaris_ 1
Ostreococcus_sp._RCC809_ 1
Bathycoccus_prasinos_ 1
Thecamonas_trahens_ATCC_50062_ 0
Leishmania_major_strain_Friedlin_ 1
Trypanosoma_vivax_ 1
Trypanosoma_cruzi_strain_CL_Brener 12
Trypanosoma_congolense_2.4 1
Aureococcus_anophagefferens_ 1
Phaeodactylum_tricornutumCCAP_1055/1 1
Perkinsus_marinus_ATCC_50983_ 1
Symbiodinium_minutum_clade_B1_v1.2 2
Trichomonas_vaginalis_ 1
Guillardia_theta_CCMP2712_v1.0_ 1
Emiliania_huxleyi_CCMP1516_ 2
Acaryochloris_marina_MBIC11017 1
Synechococcus_sp._PCC_6312 0
Gloeobacter_violaceus_PCC_7421 0
Nostoc_sp._PCC_7107 1
Nakamurella_multipartita_DSM_44233 0
Thermomonospora_curvata_DSM_43183 0
Streptomyces_sp._PAMC26508 2
Streptomyces_flavogriseus_ATCC_33331 2
Streptomyces_sp._SirexAA-E 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 2
Streptomyces_scabiei_87.22 1
Saccharomonospora_viridis_DSM_43017 0
Amycolatopsis_mediterranei_U32 2
Nocardioides_sp._JS614 0
Amycolicicoccus_subflavus_DQS3-9A1 1
Corynebacterium_ulcerans_0102 1
Corynebacterium_pseudotuberculosis_316 1
Corynebacterium_glutamicum_R 1
Corynebacterium_diphtheriae_NCTC_13129 0
Beutenbergia_cavernae_DSM_12333 1
Intrasporangium_calvum_DSM_43043 0
Brachybacterium_faecium_DSM_4810 0
Arthrobacter_chlorophenolicus_A6 2
Arthrobacter_aurescens_TC1 1
Arthrobacter_sp._Rue61a 1
Arthrobacter_sp._FB24 1
Bifidobacterium_bifidum_S17 0
Arcanobacterium_haemolyticum_DSM_20595 0
Actinomyces_sp._F0330 0
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1
Dehalogenimonas_lykanthroporepellens_BL-DC-9 0
Anaerolinea_thermophila_UNI-1 1
Sphaerobacter_thermophilus_DSM_20745 0
Herpetosiphon_aurantiacus_DSM_785 1
Roseiflexus_sp._RS-1 1
Roseiflexus_castenholzii_DSM_13941 1
Chloroflexus_sp._MS-G 3
Chloroflexus_sp._Y-400-fl 2
Chloroflexus_aggregans_DSM_9485 3
Chloroflexus_aurantiacus_J-10-fl 2
Deinococcus_geothermalis_DSM_11300 0
Erysipelothrix_rhusiopathiae_str._Fujisawa 0
Clostridium_clariflavum_DSM_19732 0
Clostridium_cellulolyticum_H10 0
Sulfobacillus_acidophilus_DSM_10332 0
Dehalobacter_sp._DCA 1
Dehalobacter_sp._CF 1
Eubacterium_limosum_KIST612 0
Roseburia_intestinalis 0
Clostridium_kluyveri_DSM_555 0
Clostridium_perfringens_ATCC_13124 0
Thermoanaerobacterium_xylanolyticum_LX-11 0
Moorella_thermoacetica_ATCC_39073 0
Ammonifex_degensii_KC4 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 0
Streptococcus_intermedius_JTH08 0
Streptococcus_equi_subsp._equi_4047 0
Streptococcus_mitis_B6 0
Streptococcus_pneumoniae_P1031 0
Streptococcus_oralis_Uo5 0
Paenibacillus_sp._JDR-2 0
Bacillus_sp._1NLA3E 1
Candidatus_Cloacamonas_acidaminovorans 1
Gemmatimonas_aurantiaca_T-27 0
Ignavibacterium_album_JCM_16511 4
Chlorobium_phaeovibrioides_DSM_265 0
Haliscomenobacter_hydrossis_DSM_1100 0
Niastella_koreensis_GR20-10 1
Chitinophaga_pinensis_DSM_2588 1
Salinibacter_ruber_M8 2
Flexibacter_litoralis_DSM_6794 0
Cyclobacterium_marinum_DSM_745 1
Marivirga_tractuosa_DSM_4126 0
Fibrella_aestuarina 0
Dyadobacter_fermentans_DSM_18053 1
Cytophaga_hutchinsonii_ATCC_33406 0
Spirosoma_linguale_DSM_74 0
Runella_slithyformis_DSM_19594 1
Parabacteroides_distasonis_ATCC_8503 1
Odoribacter_splanchnicus_DSM_20712 1
Bacteroides_helcogenes_P_36-108 1
Bacteroides_vulgatus_ATCC_8482 0
Bacteroides_thetaiotaomicron_VPI-5482 0
Bacteroides_fragilis_YCH46 1
Pedobacter_saltans_DSM_12145 2
Pedobacter_heparinus_DSM_2366 4
Sphingobacterium_sp._21 1
Fluviicola_taffensis_DSM_16823 0
Owenweeksia_hongkongensis_DSM_17368 0
Krokinobacter_sp._4H-3-7-5 0
Lacinutrix_sp._5H-3-7-4 0
Maribacter_sp._HTCC2170 0
Robiginitalea_biformata_HTCC2501 0
Croceibacter_atlanticus_HTCC2559 0
Aequorivita_sublithincola_DSM_14238 0
Zobellia_galactanivorans 0
Muricauda_ruestringensis_DSM_13258 0
Flavobacteriaceae_bacterium_3519-10 0
Flavobacterium_indicum_GPTSA100-9 0
Flavobacterium_branchiophilum_FL-15 0
Flavobacterium_columnare_ATCC_49512 0
Flavobacterium_johnsoniae_UW101 1
Isosphaera_pallida_ATCC_43644 1
Planctomyces_brasiliensis_DSM_5305 2
Rhodopirellula_baltica_SH_1 1
Opitutus_terrae_PB90-1 1
Akkermansia_muciniphila_ATCC_BAA-835 1
Brachyspira_murdochii_DSM_12563 1
Brachyspira_hyodysenteriae_WA1 1
Sphaerochaeta_pleomorpha_str._Grapes 0
Spirochaeta_caldaria_DSM_7334 1
Treponema_azotonutricium_ZAS-9 0
Treponema_brennaborense_DSM_12168 0
Treponema_paraluiscuniculi_Cuniculi_A 0
Treponema_succinifaciens_DSM_2489 0
Treponema_pallidum_subsp._pallidum_SS14 0
Treponema_denticola_ATCC_35405 0
Spirochaeta_africana_DSM_8902 0
Spirochaeta_thermophila_DSM_6192 0
Hydrogenobacter_thermophilus_TK-6 1
Candidatus_Chloracidobacterium_thermophilum_B 0
Candidatus_Solibacter_usitatus_Ellin6076 0
Granulicella_tundricola_MP5ACTX9 0
Candidatus_Koribacter_versatilis_Ellin345 0
Terriglobus_roseus_DSM_18391 0
Acidobacterium_capsulatum_ATCC_51196 0
Streptobacillus_moniliformis_DSM_12112 1
Desulfovibrio_piezophilus 1
Desulfovibrio_aespoeensis_Aspo-2 1
Sorangium_cellulosum_'So_ce_56' 1
Anaeromyxobacter_dehalogenans_2CP-1 1
Stigmatella_aurantiaca_DW4/3-1 1
Corallococcus_coralloides_DSM_2259 0
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 0
Azoarcus_sp._BH72 1
Aromatoleum_aromaticum_EbN1 1
Dechlorosoma_suillum_PS 1
Burkholderia_pseudomallei_1106a 1
Burkholderia_ambifaria_AMMD 0
Methylovorus_sp._MP688 1
Magnetococcus_marinus_MC-1 1
Dinoroseobacter_shibae_DFL_12 1
Ruegeria_pomeroyi_DSS-3 1
Azospirillum_brasilense_Sp245 1
Teredinibacter_turnerae_T7901 0
Pasteurella_multocida_subsp._multocida_str._3480 0
Shewanella_woodyi_ATCC_51908 1
Colwellia_psychrerythraea_34H 1
Pseudoalteromonas_atlantica_T6c 1
Alteromonas_sp._SN2 0
Alteromonas_macleodii_str._'Deep_ecotype' 0
Hahella_chejuensis_KCTC_2396 1
Marinomonas_sp._MWYL1 0
Thioalkalivibrio_sp._K90mix 1
Nitrosococcus_watsonii_C-113 1
Nitrosococcus_oceani_ATCC_19707 1
Pseudomonas_sp._TKP 0
Pseudomonas_entomophila_L48 0
Pseudomonas_aeruginosa_UCBPP-PA14 1
Acinetobacter_oleivorans_DR1 0
Acinetobacter_calcoaceticus_PHEA-2 0
Candidatus_Caldiarchaeum_subterraneum 1
Aeropyrum_pernix_K1 0
Halopiger_xanaduensis_SH-6 0
Halalkalicoccus_jeotgali_B3 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1
Saccharomyces_cerevisiae_UC5 0
Saccharomyces_cerevisiae_T7 0
Saccharomyces_cerevisiae_FostersB 0
Saccharomyces_cerevisiae_FostersO 0
Saccharomyces_cerevisiae_VL3 0
Saccharomyces_cerevisiae_Vin13 1
Saccharomyces_cerevisiae_AWRI796 0
Saccharomyces_cerevisiae_Sigma1278b 0
Saccharomyces_cerevisiae_W303 0
Saccharomyces_cerevisiae_JAY291 0
Saccharomyces_cerevisiae_AWRI1631 0
Saccharomyces_cerevisiae_YJM789_ 0
Saccharomyces_cerevisiae_YJM789 0
Saccharomyces_cerevisiae_RM11-1a 0
Saccharomyces_cerevisiae_RM11-1a_ 0
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   0
Stanieria_cyanosphaera_PCC_7437 1
Streptomyces_rapamycinicus_NRRL_5491 1
Streptomyces_davawensis_JCM_4913 0
Streptomyces_venezuelae_ATCC_10712 0
Amycolatopsis_mediterranei_RB 2
Amycolatopsis_mediterranei_S699 2
Amycolatopsis_mediterranei_S699 2
Amycolatopsis_orientalis_HCCB10007 1
Nocardia_brasiliensis_ATCC_700358 1
Corynebacterium_ulcerans_BR-AD22 1
Corynebacterium_ulcerans_809 1
Corynebacterium_callunae_DSM_20147 1
Corynebacterium_pseudotuberculosis_258 1
Corynebacterium_pseudotuberculosis_Cp162 1
Corynebacterium_pseudotuberculosis_P54B96 1
Corynebacterium_pseudotuberculosis_267 1
Corynebacterium_pseudotuberculosis_42/02-A 1
Corynebacterium_pseudotuberculosis_3/99-5 1
Corynebacterium_pseudotuberculosis_31 1
Corynebacterium_pseudotuberculosis_CIP_52.97 1
Corynebacterium_pseudotuberculosis_PAT10 1
Corynebacterium_pseudotuberculosis_I19 1
Corynebacterium_pseudotuberculosis_FRC41 1
Corynebacterium_pseudotuberculosis_C231 1
Corynebacterium_pseudotuberculosis_1002 1
Corynebacterium_glutamicum_SCgG2 1
Corynebacterium_glutamicum_SCgG1 1
Corynebacterium_diphtheriae_BH8 0
Corynebacterium_diphtheriae_INCA_402 0
Corynebacterium_diphtheriae_VA01 0
Corynebacterium_diphtheriae_HC04 0
Corynebacterium_diphtheriae_HC03 0
Corynebacterium_diphtheriae_HC01 0
Corynebacterium_diphtheriae_241 0
Corynebacterium_diphtheriae_CDCE_8392 0
Corynebacterium_diphtheriae_PW8 0
Corynebacterium_diphtheriae_C7_(beta) 0
Corynebacterium_diphtheriae_31A 0
Bifidobacterium_bifidum_PRL2010 0
Bifidobacterium_bifidum_BGN4 0
Actinomyces_graevenitzii_C83_ 1
Actinomyces_viscosus_C505 0
Dehalococcoides_sp._VS 0
Erysipelothrix_rhusiopathiae_SY1027 0
Sulfobacillus_acidophilus_TPY 0
Clostridium_acidurici_9a 1
Clostridium_perfringens_str._13 0
Thermoanaerobacterium_thermosaccharolyticum_M0795 0
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 0
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842 0
Lactobacillus_delbrueckii_subsp._bulgaricus_2038 0
Streptococcus_intermedius_B196 0
Streptococcus_intermedius_C270 0
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 0
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 0
Streptococcus_equi_subsp._zooepidemicus 0
Streptococcus_iniae_SF1 0
Streptococcus_pneumoniae_A026 0
Streptococcus_pneumoniae_ST556 0
Streptococcus_pneumoniae_SPNA45 0
Streptococcus_pneumoniae_SPN994039 0
Streptococcus_pneumoniae_SPN994038 0
Streptococcus_pneumoniae_SPN034183 0
Streptococcus_pneumoniae_SPN034156 0
Streptococcus_pneumoniae_INV104 0
Streptococcus_pneumoniae_INV200 0
Streptococcus_pneumoniae_OXC141 0
Streptococcus_pneumoniae_gamPNI0373 0
Streptococcus_pneumoniae_AP200 0
Streptococcus_pneumoniae_ATCC_700669 0
Streptococcus_pneumoniae_TCH8431/19A 0
Streptococcus_pneumoniae_CGSP14 0
Streptococcus_pneumoniae_G54 0
Streptococcus_pneumoniae_JJA 0
Streptococcus_pneumoniae_70585 0
Streptococcus_pneumoniae_Hungary19A-6 0
Streptococcus_pneumoniae_Taiwan19F-14 0
Streptococcus_pneumoniae_D39 0
Streptococcus_pneumoniae_670-6B 0
Streptococcus_pneumoniae_R6 0
Paenibacillus_sp._Y412MC10 2
Salinibacter_ruber_DSM_13855 1
Echinicola_vietnamensis_DSM_17526 2
Emticicia_oligotrophica_DSM_17448 0
Porphyromonas_gingivalis_TDC60 1
Bacteroides_fragilis_638R 1
Bacteroides_fragilis_NCTC_9343 1
Nonlabens_dokdonensis_DSW-6 1
Singulisphaera_acidiphila_DSM_18658 2
Brachyspira_pilosicoli_B2904 1
Treponema_pedis_str._T_A4 1
Treponema_pallidum_str._Fribourg-Blanc 0
Treponema_pallidum_subsp._pertenue_str._Gauthier 0
Treponema_pallidum_subsp._pertenue_str._CDC2 0
Treponema_pallidum_subsp._pertenue_str._SamoaD 0
Treponema_pallidum_subsp._pallidum_str._Mexico_A 0
Treponema_pallidum_subsp._pallidum_str._Chicago 0
Treponema_pallidum_subsp._pallidum_DAL-1 0
Treponema_pallidum_subsp._pallidum_str._Nichols 0
Spirochaeta_thermophila_DSM_6578 0
Hydrogenobacter_thermophilus_TK-6 1
Bdellovibrio_bacteriovorus_str._Tiberius 1
Desulfovibrio_desulfuricans_ND132 1
Sorangium_cellulosum_So0157-2 0
Anaeromyxobacter_sp._K 1
Anaeromyxobacter_dehalogenans_2CP-C 1
Myxococcus_stipitatus_DSM_14675 0
Burkholderia_thailandensis_MSMB121 1
Burkholderia_pseudomallei_MSHR305 1
Burkholderia_pseudomallei_NCTC_13179 1
Burkholderia_pseudomallei_BPC006 1
Burkholderia_pseudomallei_1026b 1
Burkholderia_pseudomallei_1710b 1
Burkholderia_pseudomallei_K96243 1
Bradyrhizobium_sp._BTAi1 1
Bradyrhizobium_oligotrophicum_S58 1
Pasteurella_multocida_36950 0
Pasteurella_multocida_subsp._multocida_str._HN06 0
Pasteurella_multocida_subsp._multocida_str._Pm70 0
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 0
Alteromonas_macleodii_str._'Black_Sea_11' 0
Alteromonas_macleodii_ATCC_27126 0
Thalassolituus_oleivorans_MIL-1 0
Thioalkalivibrio_nitratireducens_DSM_14787 0
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 0
Pseudomonas_fluorescens_F113 0
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA7 1
Acinetobacter_sp.__SH024 0
Candidatus_Nitrososphaera_gargensis_Ga9.2 0
Aeropyrum_camini_SY1_=_JCM_12091 0
Thermococcus_litoralis_DSM_5473 1
Natrinema_pellirubrum_DSM_15624 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Pongo_abelii_69_2   (Sumatran orangutan)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Macaca_mulatta_69_1   (Rhesus monkey)   1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_69_3   (Small-eared galago)   1
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Rattus_norvegicus_69_3.4   (Norway rat)   1
Mus_musculus_69_38   (House mouse)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Ochotona_princeps_69   (American pika)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   1
Vicugna_pacos_69_1   (Alpaca)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Canis_familiaris_69_3.1   (Dog)   0
Felis_catus_69   (Domestic cat)   1
Equus_caballus_69_2   (Horse)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Pteropus_vampyrus_69_1   (Large flying fox)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Loxodonta_africana_69_3   (African savanna elephant)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_69_5   (Platypus)   0
Meleagris_gallopavo_69_2   (Turkey)   0
Gallus_gallus_69_2   (Chicken)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1
Anolis_carolinensis_69_2.0   (Green anole)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_69_1   (Coelacanth)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0
Oryzias_latipes_69_1   (Japanese medaka)   0
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   5
Homo_sapiens__(NCBI_version)   (Human)   5
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
NCBI_plasmid_sequences_(Plasmids) 2
TargetDB__(Targets) 3
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 19
UniProt__viral_sequences_(Viral) 34
STRING_v9.0.5_(STRING) 82
Protein_Data_Bank_(all_PDB_sequenc) 7
Uniprot_2018_03_genome 7428
NCBI_2017_08_genome 4350
Protozoadb_2010_08_(Protozoadb) 4
NCBI_viral_sequences_(Viral) 5

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]