SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 50978,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50978 - WD40 repeat-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   172
Pan_troglodytes_76_2.1.4   (Chimpanzee)   48
Gorilla_gorilla_76_3.1   (Western gorilla)   70
Pongo_abelii_76_2   (Sumatran orangutan)   49
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   48
Papio_anubis_76   (Olive baboon)   44
Macaca_mulatta_76_1   (Rhesus monkey)   83
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   117
Otolemur_garnettii_76_3   (Small-eared galago)   47
Microcebus_murinus_76_1   (Gray mouse lemur)   34
Rattus_norvegicus_76_5.0   (Norway rat)   54
Mus_musculus_76_38   (House mouse)   88
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   40
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   51
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   51
Cavia_porcellus_76_3   (Domestic guinea pig)   50
Oryctolagus_cuniculus_76_2   (Rabbit)   42
Ochotona_princeps_76   (American pika)   37
Tupaia_belangeri_76   (Northern tree shrew)   44
Sus_scrofa_76_10.2   (Pig)   53
Bos_taurus_76_3.1   (Cattle)   52
Ovis_aries_76_3.1   (Sheep)   52
Vicugna_pacos_76_1   (Alpaca)   31
Tursiops_truncatus_76_1   (Bottlenose dolphin)   49
Mustela_putorius_furo_76_1.0   (Domestic ferret)   44
Ailuropoda_melanoleuca_76_1   (Giant panda)   52
Canis_familiaris_76_3.1   (Dog)   56
Felis_catus_76_6.2   (Domestic cat)   49
Equus_caballus_76_2   (Horse)   57
Myotis_lucifugus_76_2.0   (Little brown bat)   43
Pteropus_vampyrus_76_1   (Large flying fox)   46
Sorex_araneus_76_1   (European shrew)   39
Erinaceus_europaeus_76   (Western European hedgehog)   37
Procavia_capensis_76_1   (Cape rock hyrax)   40
Loxodonta_africana_76_3   (African savanna elephant)   61
Echinops_telfairi_76   (Small Madagascar hedgehog)   36
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   49
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   36
Macropus_eugenii_76_1.0   (Tammar wallaby)   40
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   53
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   44
Ornithorhynchus_anatinus_76_5   (Platypus)   47
Saccoglossus_kowalevskii_v3.0 63
Petromyzon_marinus_76_7.0   (Sea lamprey)   20
Meleagris_gallopavo_76_2   (Turkey)   57
Gallus_gallus_76_4   (Chicken)   41
Anas_platyrhynchos_76_1.0   (Mallard)   54
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   48
Ficedula_albicollis_76_1.0   (Collared flycatcher)   43
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   53
Anolis_carolinensis_76_2.0   (Green anole)   41
Xenopus_laevis_   (African clawed frog)   107
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   60
Latimeria_chalumnae_76_1   (Coelacanth)   56
Lepisosteus_oculatus_76   (Spotted gar)   55
Gadus_morhua_76_1   (Atlantic cod)   47
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   58
Takifugu_rubripes_76_4   (Torafugu)   127
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   71
Oryzias_latipes_76_1   (Japanese medaka)   66
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   50
Poecilia_formosa_76   (Amazon molly)   48
Oreochromis_niloticus_76_1.0   (Nile tilapia)   63
Astyanax_mexicanus_76   (Mexican tetra)   54
Danio_rerio_76_9   (Zebrafish)   82
Oikopleura_dioica 25
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   51
Ciona_intestinalis_76   (Vase tunicate)   39
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   46
Adineta_vaga 87
Octopus_bimaculoides_280 54
Crassostrea_gigas_22   (Pacific oyster)   37
Lottia_gigantea_   (Owl limpet)   43
Helobdella_robusta_ 41
Capitella_sp._I_ 43
Danaus_plexippus_OGS1.0   (Monarch butterfly)   38
Heliconius_melpomene_   (Postman butterfly)   30
Bombyx_mori_   (Domestic silkworm)   37
Nasonia_vitripennis_   (Jewel wasp)   26
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   40
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   33
Linepithema_humile_v1.1   (Argentine ant)   34
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   41
Solenopsis_invicta_v.2.2.3   (Red fire ant)   32
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   36
Atta_cephalotes_v1.1 40
Camponotus_floridanus_v3.3   (Florida carpenter ant)   36
Lucilia_cuprina   (Australian sheep blowfly)   36
Drosophila_grimshawi_1.3 32
Drosophila_willistoni_1.3 29
Drosophila_pseudoobscura_2.13 30
Drosophila_persimilis_1.3 35
Drosophila_suzukii 33
Drosophila_yakuba_1.3 31
Drosophila_simulans_1.3 28
Drosophila_sechellia_1.3 31
Drosophila_melanogaster_76_5   (Fruit fly)   50
Drosophila_erecta_1.3 29
Drosophila_ananassae_1.3 33
Drosophila_virilis_1.2 31
Drosophila_mojavensis_1.3 30
Megaselia_scalaris_22 13
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   40
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   46
Anopheles_darlingi_22   (American malaria mosquito)   32
Anopheles_gambiae_49_3j   (African malaria mosquito)   29
Tribolium_castaneum_3.0   (Red flour beetle)   38
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   28
Acyrthosiphon_pisum_   (Pea aphid)   23
Rhodnius_prolixus_22 34
Daphnia_pulex_   (Common water flea)   44
Strigamia_maritima_22 27
Sarcoptes_scabiei 26
Tetranychus_urticae_   (Two-spotted spider mite)   36
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   28
Pristionchus_pacificus_ 19
Meloidogyne_incognita_   (Southern root-knot nematode)   26
Meloidogyne_hapla_ 21
Onchocerca_volvulus_22 22
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   26
Caenorhabditis_japonica_ 31
Caenorhabditis_brenneri_ 42
Caenorhabditis_remanei_ 30
Caenorhabditis_elegans_76_235   (Roundworm)   46
Caenorhabditis_briggsae_2 34
Trichinella_spiralis_22 29
Hymenolepis_microstoma_ 32
Echinococcus_multilocularis_ 44
Echinococcus_granulosus_ 41
Taenia_solium_   (Pork tapeworm)   38
Schistosoma_mansoni_ 36
Mnemiopsis_leidyi   (Sea walnut)   34
Thelohanellus_kitauei 11
Acropora_digitifera_v1.0 53
Nematostella_vectensis_1.0   (Starlet sea anemone)   38
Hydra_vulgaris 41
Amphimedon_queenslandica 40
Trichoplax_adhaerens_ 42
Proterospongia_sp._ATCC_50818_ 37
Monosiga_brevicollis_ 28
Sphaeroforma_arctica_JP610_ 23
Capsaspora_owczarzaki_ATCC_30864_ 17
Conidiobolus_coronatus_NRRL28638_v1.0 35
Mortierella_verticillata_NRRL_6337_ 29
Phycomyces_blakesleeanus_ 34
Rhizopus_oryzae_RA_99-880_ 30
Mucor_circinelloides_ 37
Rhizomucor_miehei_CAU432_ 21
Malassezia_globosa_CBS_7966_ 41
Sporisorium_reilianum_22 17
Ustilago_maydis_ 22
Mixia_osmundae_IAM_14324_v1.0 15
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 18
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 25
Melampsora_laricis-populina_ 19
Rhodotorula_graminis_WP1_v1.0 22
Sporobolomyces_roseus_IAM_13481_ 17
Microbotryum_violaceum_22 18
Wallemia_sebi_v1.0 15
Sphaerobolus_stellatus_v1.0 43
Piloderma_croceum_F_1598_v1.0 23
Serpula_lacrymans_var._lacrymans_S7.9_ 31
Coniophora_puteana 38
Hydnomerulius_pinastri_v2.0 72
Paxillus_rubicundulus_Ve08.2h10_v1.0 43
Pisolithus_microcarpus_441_v1.0 37
Pisolithus_tinctorius_Marx_270_v1.0 33
Scleroderma_citrinum_Foug_A_v1.0 31
Coprinopsis_cinerea_okayama7_130_v3 36
Pleurotus_ostreatus_   (Oyster mushroom)   32
Amanita_thiersii_Skay4041_v1.0 24
Amanita_muscaria_Koide_v1.0   (Fly agaric)   31
Galerina_marginata_v1.0 39
Hebeloma_cylindrosporum_h7_v2.0 30
Laccaria_bicolor_S238N-H82_ 37
Agaricus_bisporus_var._bisporus_ 29
Schizophyllum_commune_ 30
Stereum_hirsutum_FP-91666_SS1__v1.0 27
Heterobasidion_annosum_ 33
Gloeophyllum_trabeumv1.0 24
Punctularia_strigosozonata_v1.0 37
Sebacina_vermifera_MAFF_305830_v1.0 38
Fomitiporia_mediterranea_v1.0 32
Tulasnella_calospora_AL13/4D_v1.0 23
Postia_placenta_ 37
Wolfiporia_cocos_MD-104_SS10__v1.0 30
Fomitopsis_pinicolav1.0 33
Fomitopsis_pinicola_FP-58527_SS1_v3.0 33
Phanerochaete_chrysosporium_RP-78_2.1 29
Dichomitus_squalens 28
Trametes_versicolor_v1.0 36
Tremella_mesenterica_   (Witches' butter)   25
Daldinia_eschscholzii_EC12_v1.0 24
Apiospora_montagnei_NRRL_25634_v1.0 24
Magnaporthe_poae_ATCC_64411_22 18
Magnaporthe_grisea_70-15_ 26
Podospora_anserina_ 19
Sporotrichum_thermophile_ATCC_42464_ 23
Thielavia_terrestris_NRRL_8126_ 24
Chaetomium_globosum_CBS_148.51_ 21
Neurospora_tetrasperma_ 18
Neurospora_discreta_FGSC_8579_ 20
Neurospora_crassa_OR74A_ 21
Cryphonectria_parasitica_   (Chestnut blight fungus)   25
Verticillium_albo-atrum_VaMs.102_ 20
Verticillium_dahliae_VdLs.17_ 19
Acremonium_alcalophilumv_1.0 23
Glomerella_graminicola_22 18
Fusarium_graminearum_ 20
Nectria_haematococca_mpVI_ 18
Fusarium_oxysporum_f._sp._lycopersici_4286_ 21
Fusarium_verticillioides_7600_ 17
Trichoderma_asperellum_CBS_433.97_v1.0 22
Trichoderma_atroviride_ 24
Trichoderma_citrinoviride_v1.0 20
Trichoderma_reesei_1.2 24
Trichoderma_virens_Gv29-8_ 22
Trichoderma_longibrachiatum_ATCC_18648_v1.0 22
Trichoderma_harzianum_CBS_226.95_v1.0 23
Amorphotheca_resinae_v1.0   (Creosote fungus)   22
Botrytis_cinerea_B05.10_ 17
Sclerotinia_sclerotiorum_ 27
Blumeria_graminis_22 28
Didymella_exigua_CBS_183.55_v1.0 24
Leptosphaeria_maculans_22 21
Setosphaeria_turcica_v1.0 24
Cochliobolus_miyabeanus_ATCC_44560_v1.0 25
Cochliobolus_victoriae_FI3_v1.0 24
Cochliobolus_carbonum_26-R-13_v1.0 24
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   20
Alternaria_brassicicola_ 21
Cochliobolus_lunatus_m118_v2.0 27
Pyrenophora_teres_f._teres_22 24
Pyrenophora_tritici-repentis_ 28
Stagonospora_nodorum_ 28
Mycosphaerella_graminicola_IPO323_ 21
Zasmidium_cellare_ATCC_36951_v1.0 24
Dothistroma_septosporum 27
Septoria_musiva_v1.0 27
Mycosphaerella_fijiensis_CIRAD86_ 22
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 24
Paracoccidioides_brasiliensis_Pb18_ 24
Coccidioides_posadasii_RMSCC_3488_ 24
Coccidioides_immitis_RS_ 21
Ajellomyces_dermatitidis_SLH14081_ 22
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 20
Microsporum_canis_CBS_113480_ 20
Trichophyton_equinum_CBS_127.97_ 20
Trichophyton_verrucosum_HKI_0517_ 25
Arthroderma_benhamiae_CBS_112371_ 20
Trichophyton_tonsurans_CBS_112818_ 21
Trichophyton_rubrum_CBS_118892_ 24
Uncinocarpus_reesii_1704_ 23
Aspergillus_zonatus_v1.0 24
Penicillium_chrysogenum_Wisconsin_54-1255_ 30
Penicillium_chrysogenum_v1.0 28
Aspergillus_acidus_v1.0 19
Aspergillus_fumigatus_Af293 20
Aspergillus_brasiliensis_v1.0 19
Aspergillus_nidulans_FGSC_A4_ 28
Aspergillus_sydowii_v1.0 25
Aspergillus_versicolor_v1.0 26
Aspergillus_glaucus 28
Aspergillus_carbonarius_ITEM_5010_ 22
Neosartorya_fischeri_NRRL_181_ 26
Aspergillus_terreus_NIH2624_ 27
Aspergillus_tubingensis_v1.0 18
Aspergillus_wentii_v1.0 22
Aspergillus_oryzae_RIB40_ 16
Aspergillus_niger_22 23
Aspergillus_niger_ATCC_1015_ 18
Aspergillus_flavus_NRRL3357_ 21
Aspergillus_clavatus_NRRL_1_ 26
Penicillium_marneffei_ATCC_18224_ 24
Tuber_melanosporum_Mel28_22 25
Tuber_melanosporum_Vittad_   (Perigord truffle)   26
Hansenula_polymorpha_v2.0 23
Dekkera_bruxellensis_CBS_2499_v2.0 32
Pichia_membranifaciensv1.0 25
Candida_tanzawaensis_NRRL_Y-17324__v1.0 26
Candida_dubliniensis_CD36_ 19
Candida_tropicalis_MYA-3404_ 22
Candida_parapsilosis_ 25
Candida_albicans_SC5314 21
Lodderomyces_elongisporus_NRRL_YB-4239_ 19
Babjeviella_inositovora_NRRL_Y-12698_v1.0 28
Pichia_stipitis_CBS_6054_ 20
Candida_guilliermondii_ATCC_6260_ 23
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 25
Debaromyces_hansenii 26
Wickerhamomyces_anomalus 26
Pichia_pastoris_GS115_ 29
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 20
Yarrowia_lipolytica_CLIB122 23
Candida_lusitaniae_ATCC_42720_ 25
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 25
Vanderwaltozyma_polyspora_DSM_70294_ 28
Candida_glabrata_CBS138 21
Kluyveromyces_thermotolerans_CBS_6340 25
Lachancea_kluyveri_ 29
Kluyveromyces_waltii 26
Ashbya_gossypii_ATCC_10895_ 26
Zygosaccharomyces_rouxii_ 20
Saccharomyces_mikatae_MIT 26
Saccharomyces_paradoxus_MIT 23
Saccharomyces_cerevisiae_76   (Baker's yeast)   25
Saccharomyces_bayanus_MIT 26
Kluyveromyces_lactis 28
Schizosaccharomyces_cryophilus_OY26_22 27
Schizosaccharomyces_octosporus_yFS286_ 28
Schizosaccharomyces_japonicus_yFS275_ 31
Schizosaccharomyces_pombe   (Fission yeast)   29
Catenaria_anguillulae_PL171_v1.0 30
Allomyces_macrogynus_ATCC_38327_ 47
Spizellomyces_punctatus_DAOM_BR117_ 32
Dictyostelium_discoideum 24
Dictyostelium_purpureum_ 24
Entamoeba_dispar_1.2 33
Entamoeba_invadens_1.2 24
Entamoeba_histolytica_1 27
Selaginella_moellendorffii_ 58
Pinus_taeda   (Loblolly pine)   23
Picea_abies   (Norway spruce)   17
Eucalyptus_grandis_v201   (Rose gum)   54
Theobroma_cacao_B97-61/B2_v1   (Cacao)   30
Gossypium_raimondii_v221 130
Citrus_clementina_v165 51
Citrus_sinensis_v154   (Sweet orange)   83
Thellungiella_halophila_v173 39
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   49
Capsella_rubella_v183 37
Arabidopsis_lyrata_   (Lyrate rockcress)   35
Arabidopsis_thaliana_10   (Thale cress)   52
Carica_papaya_   (Papaya)   29
Medicago_truncatula_   (Barrel medic)   64
Phaseolus_vulgaris_v186   (French bean)   47
Glycine_max_v109   (Soybean)   88
Cucumis_sativus_v122   (Cucumber)   39
Fragaria_vesca_   (Wild strawberry)   29
Malus_domestica_v196   (Apple)   64
Prunus_persica_v139   (Peach)   33
Linum_usitatissimum_v200   (Flax)   72
Manihot_esculenta_v147   (Cassava)   46
Populus_trichocarpa_v156   (Black cottonwood)   53
Vitis_vinifera_   (Wine grape)   39
Mimulus_guttatus_v140   (Spotted monkey flower)   36
Solanum_lycopersicum_v.2.3   (Tomato)   34
Solanum_tuberosum_   (Potato)   51
Actinidia_chinensis_Hongyang_ 47
Aquilegia_coerulea_v195 78
Triticum_urartu_22 28
Triticum_aestivum_22   (Bread wheat)   110
Aegilops_tauschii_22 33
Brachypodium_distachyon_   (Stiff brome)   39
Oryza_barthii_22   (African wild rice)   49
Oryza_meridionalis_22 48
Oryza_glumaepatula_22 47
Oryza_glaberrima   (African rice)   25
Oryza_punctata_22 37
Oryza_nivara_22 41
Oryza_brachyantha_22   (Malo sina)   39
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   49
Oryza_sativa_v193   (Rice)   48
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   43
Panicum_virgatum_v202   (Switchgrass)   64
Setaria_italica_v164   (Foxtail millet)   27
Zea_mays_subsp._mays_   (Maize)   59
Zea_mays_v181   (Maize)   65
Sorghum_bicolor_   (Sorghum)   27
Musa_balbisiana   (Balbis banana)   39
Musa_acuminata_22   (Wild Malaysian banana)   39
Amborella_trichopoda_22 33
Physcomitrella_patens 34
Coccomyxa_subellipsoidea_sp._C-169_v2 20
Asterochloris_sp._Cgr/DA1pho_v1.0 22
Chlorella_variabilis_sp._NC64A_ 24
Chlorella_vulgaris_ 25
Volvox_carteri_f._nagariensis_ 16
Volvox_carteri_v199 21
Chlamydomonas_reinhardtii_4.0 28
Ostreococcus_sp._RCC809_ 19
Ostreococcus_lucimarinus_CCE9901_ 19
Ostreococcus_tauri_ 19
Bathycoccus_prasinos_ 17
Micromonas_sp._RCC299_ 23
Micromonas_pusilla_CCMP1545_v3.0 23
Cyanidioschyzon_merolae_strain_10D_22 13
Cyanidioschyzon_merolae 14
Porphyridium_purpureum_02_2012 25
Thecamonas_trahens_ATCC_50062_ 28
Bigelowiella_natans_CCMP2755_22 28
Giardia_lamblia_2.3 29
Cyanophora_paradoxa_ 29
Leishmania_mexicana_2.4 24
Leishmania_major_strain_Friedlin_ 19
Leishmania_infantum_JPCM5_2.4 24
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 25
Trypanosoma_vivax_ 32
Trypanosoma_cruzi_strain_CL_Brener 28
Trypanosoma_congolense_2.4 38
Trypanosoma_brucei_gambiense_v4.1 26
Trypanosoma_brucei_TREU927_v4.1 29
Ectocarpus_siliculosus 36
Aureococcus_anophagefferens_ 17
Albugo_laibachii_22 28
Pythium_iwayamai_DAOM_BR242034_22 34
Pythium_arrhenomanes_ATCC_12531_22 29
Pythium_ultimum_v1.7-2 26
Pythium_aphanidermatum_DAOM_BR444_22 23
Pythium_irregulare_DAOM_BR486_22 25
Pythium_vexans_DAOM_BR484_22 23
Phytophthora_ramorum_1.1   (Sudden oak death agent)   25
Phytophthora_sojae_1.1 35
Phytophthora_infestans_T30-4_ 29
Phytophthora_capsici_ 31
Hyaloperonospora_arabidopsidis_22 33
Phaeodactylum_tricornutumCCAP_1055/1 15
Fragilariopsis_cylindrus 19
Thalassiosira_pseudonana_CCMP1335 10
Perkinsus_marinus_ATCC_50983_ 37
Paramecium_tetraurelia_ 85
Tetrahymena_thermophila_SB210_1_ 45
Ichthyophthirius_multifiliis_strain_G5_ 26
Cryptosporidium_hominis 13
Cryptosporidium_muris 9
Cryptosporidium_parvum_Iowa_II 15
Neospora_caninum 12
Toxoplasma_gondii_VEG 15
Toxoplasma_gondii_ME49 15
Toxoplasma_gondii_GT1 11
Babesia_bovis_T2Bo_ 29
Theileria_parva__ 12
Theileria_annulata 11
Plasmodium_falciparum_3D7_ 16
Plasmodium_vivax_SaI-1_7.0 15
Plasmodium_knowlesi_strain_H_ 21
Plasmodium_yoelii_ssp._yoelii_1_ 16
Plasmodium_chabaudi_ 17
Plasmodium_berghei_ANKA_ 14
Symbiodinium_minutum_clade_B1_v1.2 31
Naegleria_gruberi_ 26
Trichomonas_vaginalis_ 83
Guillardia_theta_CCMP2712_v1.0_ 38
Emiliania_huxleyi_CCMP1516_ 28
Leptolyngbya_sp._PCC_7376 0
Pseudanabaena_sp._PCC_7367 1
Acaryochloris_marina_MBIC11017 2
Synechocystis_sp._PCC_6803 0
Microcoleus_sp._PCC_7113 1
Trichodesmium_erythraeum_IMS101 1
Geitlerinema_sp._PCC_7407 0
Cyanothece_sp._PCC_8802 0
Gloeocapsa_sp._PCC_7428 1
Microcystis_aeruginosa_NIES-843 0
Gloeobacter_violaceus_PCC_7421 0
Rivularia_sp._PCC_7116 0
Anabaena_variabilis_ATCC_29413 1
'Nostoc_azollae'_0708 1
Nostoc_sp._PCC_7107 1
Nostoc_punctiforme_PCC_73102 1
Nostoc_sp._PCC_7524 0
Anabaena_sp._90 1
Modestobacter_marinus 0
Frankia_symbiont_of_Datisca_glomerata 1
Frankia_sp._EAN1pec 0
Thermomonospora_curvata_DSM_43183 0
Streptosporangium_roseum_DSM_43021 0
Kitasatospora_setae_KM-6054 0
Streptomyces_sp._PAMC26508 0
Streptomyces_flavogriseus_ATCC_33331 0
Streptomyces_avermitilis_MA-4680 0
Streptomyces_scabiei_87.22 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Amycolatopsis_mediterranei_U32 0
Nocardioides_sp._JS614 1
Propionibacterium_propionicum_F0230a 0
Micromonospora_sp._L5 0
Actinoplanes_sp._N902-109 0
Actinoplanes_sp._SE50/110 0
Gordonia_sp._KTR9 0
Rhodococcus_erythropolis_PR4 0
Mycobacterium_marinum_M 0
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 0
Anaerolinea_thermophila_UNI-1 0
Roseiflexus_sp._RS-1 0
Clostridium_cellulolyticum_H10 0
Pelotomaculum_thermopropionicum_SI 1
Exiguobacterium_sp._MH3 1
Pelodictyon_phaeoclathratiforme_BU-1 0
Chloroherpeton_thalassium_ATCC_35110 0
Prosthecochloris_aestuarii_DSM_271 0
Haliscomenobacter_hydrossis_DSM_1100 0
Saprospira_grandis_str._Lewin 0
Niastella_koreensis_GR20-10 0
Flexibacter_litoralis_DSM_6794 0
Cytophaga_hutchinsonii_ATCC_33406 0
Odoribacter_splanchnicus_DSM_20712 1
Bacteroides_helcogenes_P_36-108 1
Bacteroides_fragilis_YCH46 1
Owenweeksia_hongkongensis_DSM_17368 0
Maribacter_sp._HTCC2170 0
Croceibacter_atlanticus_HTCC2559 1
Muricauda_ruestringensis_DSM_13258 0
Polaribacter_sp._MED152 0
Capnocytophaga_canimorsus_Cc5 1
Isosphaera_pallida_ATCC_43644 0
Planctomyces_brasiliensis_DSM_5305 0
Planctomyces_limnophilus_DSM_3776 1
Rhodopirellula_baltica_SH_1 0
Pirellula_staleyi_DSM_6068 0
Opitutus_terrae_PB90-1 0
Turneriella_parva_DSM_21527 0
Treponema_primitia_ZAS-2 0
Calditerrivibrio_nitroreducens_DSM_19672 0
Kosmotoga_olearia_TBF_19.5.1 0
Desulfurobacterium_thermolithotrophum_DSM_11699 1
Granulicella_mallensis_MP5ACTX8 0
Candidatus_Koribacter_versatilis_Ellin345 0
Terriglobus_saanensis_SP1PR4 0
Candidatus_Nitrospira_defluvii 0
Nautilia_profundicola_AmH 2
Campylobacter_curvus_525.92 1
Campylobacter_concisus_13826 1
uncultured_Sulfuricurvum_sp._RIFRC-1 2
Sulfuricurvum_kujiense_DSM_16994 4
Sulfurimonas_autotrophica_DSM_16294 2
Sulfurimonas_denitrificans_DSM_1251 2
Wolinella_succinogenes_DSM_1740 3
Helicobacter_mustelae_12198 1
Helicobacter_pylori_B38 0
Nitratiruptor_sp._SB155-2 0
Haliangium_ochraceum_DSM_14365 1
Sorangium_cellulosum_'So_ce_56' 0
Anaeromyxobacter_sp._Fw109-5 0
Myxococcus_xanthus_DK_1622 0
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 0
Burkholderia_phymatum_STM815 0
Magnetococcus_marinus_MC-1 0
Gluconacetobacter_xylinus_NBRC_3288 2
Mesorhizobium_opportunistum_WSM2075 0
Aggregatibacter_actinomycetemcomitans_D7S-1 2
Ferrimonas_balearica_DSM_9799 0
Shewanella_loihica_PV-4 0
Shewanella_baltica_OS185 0
Shewanella_violacea_DSS12 0
Colwellia_psychrerythraea_34H 1
Pseudoalteromonas_sp._SM9913 0
Pseudoalteromonas_haloplanktis_TAC125 0
Hahella_chejuensis_KCTC_2396 0
Photorhabdus_luminescens_subsp._laumondii_TTO1 0
Sodalis_glossinidius_str._'morsitans' 1
Pseudomonas_stutzeri_A1501 0
Pseudomonas_fulva_12-X 0
Pseudomonas_putida_F1 0
Methylophaga_sp._JAM1 0
Thiomicrospira_crunogena_XCL-2 0
Cenarchaeum_symbiosum_A 0
Fervidicoccus_fontis_Kam940 0
Staphylothermus_hellenicus_DSM_12710 0
Methanosalsum_zhilinae_DSM_4017 0
Methanobrevibacter_ruminantium_M1 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   118
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   41
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   33
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   25
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   43
Cryptococcus_neoformans_var._grubii_H99_ 24
Cryptococcus_neoformans_B-3501A_ 23
Cryptococcus_neoformans_JEC21_ 22
Paracoccidioides_brasiliensis_Pb01_ 23
Paracoccidioides_brasiliensis_Pb03_ 28
Coccidioides_posadasii_str._Silveira_ 24
Coccidioides_immitis_RMSCC_3703_ 22
Coccidioides_immitis_RMSCC_2394_ 22
Coccidioides_immitis_H538.4_ 25
Ajellomyces_dermatitidis_ER-3_ 24
Histoplasma_capsulatum_H143 22
Histoplasma_capsulatum_H88 21
Histoplasma_capsulatum_G186AR 21
Aspergillus_fumigatus_A1163_ 22
Candida_albicans_WO-1_ 21
Saccharomyces_cerevisiae_UC5 20
Saccharomyces_cerevisiae_PW5 22
Saccharomyces_cerevisiae_FL100 9
Saccharomyces_cerevisiae_CLIB382 1
Saccharomyces_cerevisiae_CLIB324 6
Saccharomyces_cerevisiae_CBS7960 18
Saccharomyces_cerevisiae_YJM269 19
Saccharomyces_cerevisiae_T7 24
Saccharomyces_cerevisiae_FostersB 23
Saccharomyces_cerevisiae_FostersO 21
Saccharomyces_cerevisiae_VL3 19
Saccharomyces_cerevisiae_Vin13 29
Saccharomyces_cerevisiae_LalvinQA23 22
Saccharomyces_cerevisiae_AWRI796 21
Saccharomyces_cerevisiae_Sigma1278b 25
Saccharomyces_cerevisiae_W303 25
Saccharomyces_cerevisiae_JAY291 25
Saccharomyces_cerevisiae_AWRI1631 20
Saccharomyces_cerevisiae_YPS163 11
Saccharomyces_cerevisiae_M22 6
Saccharomyces_cerevisiae_T73 8
Saccharomyces_cerevisiae_CLIB215 16
Saccharomyces_cerevisiae_Y10 7
Saccharomyces_cerevisiae_YJM789_ 23
Saccharomyces_cerevisiae_YJM789 23
Saccharomyces_cerevisiae_RM11-1a 24
Saccharomyces_cerevisiae_RM11-1a_ 24
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   25
Schizosaccharomyces_pombe_972h-_ 29
Batrachochytrium_dendrobatidis_JEL423_ 24
Batrachochytrium_dendrobatidis_JAM81_ 31
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   27
Hordeum_vulgare_22   (Domesticated barley)   112
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   32
Trypanosoma_brucei_Lister_427_v4.1 27
Neospora_caninum_Nc-Liverpool_6.2 12
Plasmodium_falciparum_HB3_ 13
Plasmodium_falciparum_Dd2_ 10
Chamaesiphon_minutus_PCC_6605 0
Synechocystis_sp._PCC_6803 0
Crinalium_epipsammum_PCC_9333 1
Oscillatoria_nigro-viridis_PCC_7112 1
Oscillatoria_acuminata_PCC_6304 0
Arthrospira_platensis_NIES-39 0
Cyanothece_sp._PCC_7822 0
Cyanothece_sp._PCC_7424 0
Cyanothece_sp._ATCC_51142 0
Cyanothece_sp._PCC_8801 0
Stanieria_cyanosphaera_PCC_7437 1
Cylindrospermum_stagnale_PCC_7417 0
Anabaena_cylindrica_PCC_7122 0
Frankia_sp._EuI1c 0
Frankia_sp._CcI3 0
Streptomyces_collinus_Tu_365 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Saccharothrix_espanaensis_DSM_44229 0
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_orientalis_HCCB10007 0
Rhodococcus_pyridinivorans_SB3094 0
Mycobacterium_gilvum_Spyr1 0
Bifidobacterium_asteroides_PRL2011 0
Candidatus_Arthromitus_sp._SFB-rat-Yit 1
Echinicola_vietnamensis_DSM_17526 0
Emticicia_oligotrophica_DSM_17448 1
Bacteroides_fragilis_638R 1
Bacteroides_fragilis_NCTC_9343 1
Psychroflexus_torquis_ATCC_700755 1
Singulisphaera_acidiphila_DSM_18658 0
Helicobacter_pylori_BM012S 0
Helicobacter_pylori_BM012A 0
Helicobacter_pylori_SouthAfrica20 0
Helicobacter_pylori_UM298 0
Helicobacter_pylori_UM066 0
Helicobacter_pylori_UM037 0
Helicobacter_pylori_UM299 0
Helicobacter_pylori_UM032 0
Helicobacter_pylori_OK310 0
Helicobacter_pylori_OK113 0
Helicobacter_pylori_Rif2 0
Helicobacter_pylori_Rif1 0
Helicobacter_pylori_HUP-B14 0
Helicobacter_pylori_PeCan18 0
Helicobacter_pylori_Shi169 0
Helicobacter_pylori_Shi112 0
Helicobacter_pylori_Shi417 0
Helicobacter_pylori_XZ274 0
Helicobacter_pylori_Aklavik117 0
Helicobacter_pylori_SNT49 0
Helicobacter_pylori_Puno135 0
Helicobacter_pylori_Puno120 0
Helicobacter_pylori_ELS37 0
Helicobacter_pylori_Gambia94/24 0
Helicobacter_pylori_SouthAfrica7 0
Helicobacter_pylori_India7 0
Helicobacter_pylori_Lithuania75 0
Helicobacter_pylori_2017 0
Helicobacter_pylori_2018 0
Helicobacter_pylori_908 0
Helicobacter_pylori_F57 0
Helicobacter_pylori_F30 0
Helicobacter_pylori_F16 0
Helicobacter_pylori_Sat464 0
Helicobacter_pylori_Cuz20 0
Helicobacter_pylori_PeCan4 0
Helicobacter_pylori_SJM180 0
Helicobacter_pylori_B8 0
Helicobacter_pylori_52 0
Helicobacter_pylori_v225d 0
Helicobacter_pylori_83 0
Helicobacter_pylori_35A 0
Helicobacter_pylori_P12 0
Helicobacter_pylori_G27 0
Helicobacter_pylori_Shi470 0
Helicobacter_pylori_HPAG1 0
Helicobacter_pylori_51 0
Helicobacter_pylori_F32 0
Helicobacter_pylori_26695 0
Helicobacter_pylori_26695 0
Sorangium_cellulosum_So0157-2 0
Anaeromyxobacter_dehalogenans_2CP-C 0
Myxococcus_stipitatus_DSM_14675 0
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 0
Magnetospirillum_gryphiswaldense_MSR-1_v2 0
Shewanella_baltica_BA175 0
Shewanella_baltica_OS223 0
Shewanella_sp._MR-7 0
Pseudomonas_syringae_pv._phaseolicola_1448A 0
Pseudomonas_stutzeri_CCUG_29243 0
Pseudomonas_stutzeri_DSM_4166 0
Pseudomonas_stutzeri_RCH2 0
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 0
Pseudomonas_putida_NBRC_14164 0
Pseudomonas_putida_BIRD-1 0
Pseudomonas_putida_KT2440 0
Pseudomonas_putida_GB-1 0
Pseudomonas_fluorescens_F113 0
Pseudomonas_fluorescens_R124 0
Pseudomonas_fluorescens_Pf0-1 0
Acinetobacter_lwoffii__SH145 1
Methanoregula_formicica_Methanoregula_formicicum_SMSP 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   47
Pan_troglodytes_69_2.1.4   (Chimpanzee)   48
Gorilla_gorilla_69_3.1   (Western gorilla)   50
Pongo_abelii_69_2   (Sumatran orangutan)   47
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   44
Macaca_mulatta_69_1   (Rhesus monkey)   40
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   48
Otolemur_garnettii_69_3   (Small-eared galago)   47
Microcebus_murinus_69_1   (Gray mouse lemur)   34
Rattus_norvegicus_69_3.4   (Norway rat)   42
Mus_musculus_69_38   (House mouse)   44
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   40
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   49
Cavia_porcellus_69_3   (Domestic guinea pig)   48
Oryctolagus_cuniculus_69_2   (Rabbit)   40
Ochotona_princeps_69   (American pika)   37
Tupaia_belangeri_69   (Northern tree shrew)   44
Sus_scrofa_69_10.2   (Pig)   46
Bos_taurus_69_3.1   (Cattle)   46
Vicugna_pacos_69_1   (Alpaca)   31
Tursiops_truncatus_69_1   (Bottlenose dolphin)   49
Mustela_putorius_furo_69_1.0   (Domestic ferret)   44
Ailuropoda_melanoleuca_69_1   (Giant panda)   45
Canis_familiaris_69_3.1   (Dog)   41
Felis_catus_69   (Domestic cat)   45
Equus_caballus_69_2   (Horse)   51
Myotis_lucifugus_69_2.0   (Little brown bat)   43
Pteropus_vampyrus_69_1   (Large flying fox)   45
Sorex_araneus_69_1   (European shrew)   39
Erinaceus_europaeus_69   (Western European hedgehog)   37
Procavia_capensis_69_1   (Cape rock hyrax)   39
Loxodonta_africana_69_3   (African savanna elephant)   49
Echinops_telfairi_69   (Small Madagascar hedgehog)   36
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   36
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   36
Macropus_eugenii_69_1.0   (Tammar wallaby)   39
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   40
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   41
Ornithorhynchus_anatinus_69_5   (Platypus)   41
Petromyzon_marinus_69_7.0   (Sea lamprey)   16
Meleagris_gallopavo_69_2   (Turkey)   45
Gallus_gallus_69_2   (Chicken)   40
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   46
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   45
Anolis_carolinensis_69_2.0   (Green anole)   44
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   44
Latimeria_chalumnae_69_1   (Coelacanth)   43
Gadus_morhua_69_1   (Atlantic cod)   47
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   51
Takifugu_rubripes_69_4   (Torafugu)   48
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   50
Oryzias_latipes_69_1   (Japanese medaka)   47
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   50
Oreochromis_niloticus_69_1.0   (Nile tilapia)   48
Danio_rerio_69_9   (Zebrafish)   59
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   27
Ciona_intestinalis_69   (Vase tunicate)   34
Drosophila_melanogaster_69_5   (Fruit fly)   30
Caenorhabditis_elegans_69_215   (Roundworm)   28
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   25
Arabidopsis_thaliana_10   (Thale cress)   35

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   194
Homo_sapiens__(NCBI_version)   (Human)   84
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   43
Heliconius_numata__(Incomplete) 7
Loa_loa_v3.3_(Request)   (Eye worm)   27
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   26
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   25
Moniliophthora_perniciosa_FA553__(Genome_survey) 6
Encephalitozoon_intestinalis__(endoparasite) 8
Encephalitozoon_cuniculi_(endoparasite) 9
Picea_sitchensis__(Incomplete)   (Sitka spruce)   2
Lotus_japonicus__(Early_assembly) 33
Malus_x_domestica_(Duplicate)   (Apple)   64
Ricinus_communis__(Early_assembly)   (Castor bean)   31
Nicotiana_benthamiana_0.4.4_(Early_draft) 71
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   35
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   34
Phoenix_dactylifera__(Early_draft)   (Date palm)   40
Guillardia_theta_(nucleomorph) 2
NCBI_plasmid_sequences_(Plasmids) 0
Uniprot_2018_03_genome 150213
Protein_Data_Bank_(all_PDB_sequenc) 137
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 109
TargetDB__(Targets) 206
Protozoadb_2010_08_(Protozoadb) 806
STRING_v9.0.5_(STRING) 3755
NCBI_viral_sequences_(Viral) 0
Core_Eukaryotic_Genes_458_(CEGMA) 6
NCBI_2017_08_genome 42375

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