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Domain combinations for 51110,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51110 - alpha-D-mannose-specific plant lectins

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   3
Mnemiopsis_leidyi   (Sea walnut)   1
Sphaeroforma_arctica_JP610_ 0
Conidiobolus_coronatus_NRRL28638_v1.0 0
Mixia_osmundae_IAM_14324_v1.0 0
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 0
Melampsora_laricis-populina_ 0
Nectria_haematococca_mpVI_ 0
Allomyces_macrogynus_ATCC_38327_ 4
Dictyostelium_discoideum 1
Dictyostelium_purpureum_ 1
Selaginella_moellendorffii_ 3
Pinus_taeda   (Loblolly pine)   3
Picea_abies   (Norway spruce)   2
Eucalyptus_grandis_v201   (Rose gum)   4
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 0
Citrus_clementina_v165 2
Citrus_sinensis_v154   (Sweet orange)   6
Thellungiella_halophila_v173 0
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   1
Capsella_rubella_v183 0
Arabidopsis_lyrata_   (Lyrate rockcress)   1
Arabidopsis_thaliana_10   (Thale cress)   0
Carica_papaya_   (Papaya)   2
Medicago_truncatula_   (Barrel medic)   3
Phaseolus_vulgaris_v186   (French bean)   0
Glycine_max_v109   (Soybean)   0
Cucumis_sativus_v122   (Cucumber)   3
Fragaria_vesca_   (Wild strawberry)   7
Malus_domestica_v196   (Apple)   12
Prunus_persica_v139   (Peach)   7
Linum_usitatissimum_v200   (Flax)   0
Manihot_esculenta_v147   (Cassava)   1
Populus_trichocarpa_v156   (Black cottonwood)   7
Vitis_vinifera_   (Wine grape)   1
Mimulus_guttatus_v140   (Spotted monkey flower)   2
Solanum_lycopersicum_v.2.3   (Tomato)   4
Solanum_tuberosum_   (Potato)   3
Actinidia_chinensis_Hongyang_ 6
Aquilegia_coerulea_v195 6
Triticum_urartu_22 2
Triticum_aestivum_22   (Bread wheat)   11
Aegilops_tauschii_22 2
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_barthii_22   (African wild rice)   0
Oryza_meridionalis_22 4
Oryza_glumaepatula_22 1
Oryza_glaberrima   (African rice)   1
Oryza_punctata_22 1
Oryza_nivara_22 1
Oryza_brachyantha_22   (Malo sina)   1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1
Oryza_sativa_v193   (Rice)   1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Panicum_virgatum_v202   (Switchgrass)   2
Setaria_italica_v164   (Foxtail millet)   0
Zea_mays_subsp._mays_   (Maize)   2
Zea_mays_v181   (Maize)   0
Sorghum_bicolor_   (Sorghum)   1
Musa_balbisiana   (Balbis banana)   6
Musa_acuminata_22   (Wild Malaysian banana)   7
Amborella_trichopoda_22 1
Physcomitrella_patens 0
Volvox_carteri_f._nagariensis_ 0
Chlamydomonas_reinhardtii_4.0 0
Bigelowiella_natans_CCMP2755_22 1
Ectocarpus_siliculosus 0
Fragilariopsis_cylindrus 0
Tetrahymena_thermophila_SB210_1_ 0
Symbiodinium_minutum_clade_B1_v1.2 0
Naegleria_gruberi_ 1
Guillardia_theta_CCMP2712_v1.0_ 0
Emiliania_huxleyi_CCMP1516_ 0
Acidimicrobium_ferrooxidans_DSM_10331 0
Streptomyces_sp._PAMC26508 0
Streptomyces_flavogriseus_ATCC_33331 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1
Actinoplanes_sp._N902-109 0
Mycobacterium_ulcerans_Agy99 0
Mycobacterium_marinum_M 0
Mycobacterium_smegmatis_str._MC2_155 0
Ruminococcus_albus_7 0
Paenibacillus_mucilaginosus_3016 1
Haliscomenobacter_hydrossis_DSM_1100 0
Terriglobus_roseus_DSM_18391 0
Geobacter_daltonii_FRC-32 0
Geobacter_uraniireducens_Rf4 0
Geobacter_sulfurreducens_KN400 0
Geobacter_metallireducens_GS-15 0
Pelobacter_propionicus_DSM_2379 0
Sorangium_cellulosum_'So_ce_56' 0
Corallococcus_coralloides_DSM_2259 1
Cupriavidus_metallidurans_CH34 0
Burkholderia_cenocepacia_HI2424 0
Pseudomonas_sp._UW4 1

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Hordeum_vulgare_22   (Domesticated barley)   5
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Anabaena_cylindrica_PCC_7122 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1
Mycobacterium_liflandii_128FXT 0
Mycobacterium_smegmatis_str._MC2_155 0
Mycobacterium_kansasii_ATCC_12478 0
Ruminococcus_champanellensis_18P13 0
Geobacter_sulfurreducens_PCA 0
Burkholderia_cenocepacia_MC0-3 0
Burkholderia_cenocepacia_AU_1054 0
Pseudomonas_putida_W619 1
Pseudomonas_fluorescens_A506 1

Longest transcript per gene
Genome     Number
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Arabidopsis_thaliana_10   (Thale cress)   0

Others
Genome     Number
Lotus_japonicus__(Early_assembly) 5
Malus_x_domestica_(Duplicate)   (Apple)   12
Ricinus_communis__(Early_assembly)   (Castor bean)   2
Nicotiana_benthamiana_0.4.4_(Early_draft) 6
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   4
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   4
Phoenix_dactylifera__(Early_draft)   (Date palm)   1
NCBI_plasmid_sequences_(Plasmids) 0
STRING_v9.0.5_(STRING) 28
NCBI_2017_08_genome 263
Uniprot_2018_03_genome 1920
NCBI_viral_sequences_(Viral) 0

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