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Domain combinations for 51126,_gap_,51126,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51126 - Pectin lyase-like
51126 - Pectin lyase-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Pongo_abelii_76_2   (Sumatran orangutan)   0
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Papio_anubis_76   (Olive baboon)   0
Macaca_mulatta_76_1   (Rhesus monkey)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_76_3   (Small-eared galago)   0
Mus_musculus_76_38   (House mouse)   0
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   0
Cavia_porcellus_76_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_76_2   (Rabbit)   0
Ochotona_princeps_76   (American pika)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Canis_familiaris_76_3.1   (Dog)   0
Felis_catus_76_6.2   (Domestic cat)   0
Equus_caballus_76_2   (Horse)   0
Myotis_lucifugus_76_2.0   (Little brown bat)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Procavia_capensis_76_1   (Cape rock hyrax)   0
Loxodonta_africana_76_3   (African savanna elephant)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_76_5   (Platypus)   0
Saccoglossus_kowalevskii_v3.0 0
Meleagris_gallopavo_76_2   (Turkey)   0
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_76_1   (Coelacanth)   0
Gadus_morhua_76_1   (Atlantic cod)   0
Takifugu_rubripes_76_4   (Torafugu)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   0
Astyanax_mexicanus_76   (Mexican tetra)   0
Danio_rerio_76_9   (Zebrafish)   0
Oikopleura_dioica 0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   0
Crassostrea_gigas_22   (Pacific oyster)   0
Helobdella_robusta_ 0
Capitella_sp._I_ 0
Acropora_digitifera_v1.0 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Amphimedon_queenslandica 1
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 0
Chlorella_vulgaris_ 0
Volvox_carteri_f._nagariensis_ 0
Volvox_carteri_v199 0
Chlamydomonas_reinhardtii_4.0 0
Ostreococcus_sp._RCC809_ 0
Thecamonas_trahens_ATCC_50062_ 1
Bigelowiella_natans_CCMP2755_22 0
Cyanophora_paradoxa_ 0
Leishmania_major_strain_Friedlin_ 0
Leishmania_infantum_JPCM5_2.4 0
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 0
Trypanosoma_cruzi_strain_CL_Brener 2
Ectocarpus_siliculosus 0
Aureococcus_anophagefferens_ 0
Paramecium_tetraurelia_ 0
Tetrahymena_thermophila_SB210_1_ 0
Leptolyngbya_sp._PCC_7376 2
Acaryochloris_marina_MBIC11017 0
Microcoleus_sp._PCC_7113 1
Rivularia_sp._PCC_7116 2
Calothrix_sp._PCC_7507 1
Eubacterium_eligens_ATCC_27750 0
Clostridium_phytofermentans_ISDg 0
Clostridium_cellulovorans_743B 0
Caldicellulosiruptor_kronotskyensis_2002 1
Caldicellulosiruptor_owensensis_OL 1
Chlorobaculum_parvum_NCIB_8327 1
Saprospira_grandis_str._Lewin 0
Niastella_koreensis_GR20-10 1
Chitinophaga_pinensis_DSM_2588 0
Pedobacter_saltans_DSM_12145 1
Owenweeksia_hongkongensis_DSM_17368 0
Isosphaera_pallida_ATCC_43644 1
Rhodopirellula_baltica_SH_1 0
Pirellula_staleyi_DSM_6068 0
Opitutus_terrae_PB90-1 0
Akkermansia_muciniphila_ATCC_BAA-835 0
Streptobacillus_moniliformis_DSM_12112 0
candidate_division_SR1_bacterium_RAAC1_SR1_1 0
Desulfococcus_oleovorans_Hxd3 0
Geobacter_metallireducens_GS-15 1
Burkholderia_cenocepacia_HI2424 0
Burkholderia_vietnamiensis_G4 0
Burkholderia_gladioli_BSR3 0
Pusillimonas_sp._T7-7 0
Taylorella_asinigenitalis_MCE3 0
Achromobacter_xylosoxidans_A8 1
Thiobacillus_denitrificans_ATCC_25259 1
Erythrobacter_litoralis_HTCC2594 0
Sphingobium_sp._SYK-6 0
Brucella_abortus_S19 0
Beijerinckia_indica_subsp._indica_ATCC_9039 1
Nitrobacter_hamburgensis_X14 2
Bradyrhizobium_sp._ORS_278 0
Bartonella_tribocorum_CIP_105476 0
Bartonella_henselae_str._Houston-1 0
Bartonella_grahamii_as4aup 0
Bartonella_quintana_str._Toulouse 0
Methylococcus_capsulatus_str._Bath 1
Photorhabdus_asymbiotica 0
Photorhabdus_luminescens_subsp._laumondii_TTO1 0
Edwardsiella_ictaluri_93-146 0
Rahnella_sp._Y9602 0
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 0
Pseudomonas_protegens_Pf-5 1
Pseudomonas_aeruginosa_UCBPP-PA14 0
Thioalkalimicrobium_cyclicum_ALM1 0
Acidilobus_saccharovorans_345-15 1
Thermococcus_sp._4557 0
Thermococcus_gammatolerans_EJ3 0
Methanococcus_voltae_A3 1
Methanosphaera_stadtmanae_DSM_3091 0
Methanobrevibacter_ruminantium_M1 0
Methanobrevibacter_smithii_ATCC_35061 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Synechococcus_sp._CC9902 0
Cyanothece_sp._PCC_8801 0
Calothrix_parietina_Calothrix_sp._PCC_6303 1
Bifidobacterium_asteroides_PRL2011 0
Prevotella_dentalis_DSM_3688 1
Burkholderia_cenocepacia_MC0-3 0
Burkholderia_cenocepacia_AU_1054 0
Burkholderia_cenocepacia_J2315 0
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1
Taylorella_asinigenitalis_14/45 0
Taylorella_equigenitalis_14/56 0
Zymomonas_mobilis_subsp._mobilis_CP4 0
Rhodopseudomonas_palustris_HaA2 0
Bartonella_vinsonii_subsp._berkhoffii_str._Winnie 0
Bartonella_quintana_RM-11 0
Actinobacillus_suis_H91-0380 0
Rahnella_aquatilis_HX2 0
Serratia_marcescens_FGI94 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 0
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 0
Pseudomonas_fluorescens_R124 0
Pseudomonas_fluorescens_Pf0-1 0
Pseudomonas_aeruginosa_B136-33 0
Pseudomonas_aeruginosa_NCGM2.S1 0
Thermococcus_sp._AM4 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   0
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Pongo_abelii_69_2   (Sumatran orangutan)   0
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Macaca_mulatta_69_1   (Rhesus monkey)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_69_3   (Small-eared galago)   0
Mus_musculus_69_38   (House mouse)   0
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   0
Cavia_porcellus_69_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_69_2   (Rabbit)   0
Ochotona_princeps_69   (American pika)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Canis_familiaris_69_3.1   (Dog)   0
Equus_caballus_69_2   (Horse)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   0
Erinaceus_europaeus_69   (Western European hedgehog)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Loxodonta_africana_69_3   (African savanna elephant)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_69_5   (Platypus)   0
Meleagris_gallopavo_69_2   (Turkey)   0
Gallus_gallus_69_2   (Chicken)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_69_1   (Coelacanth)   0
Gadus_morhua_69_1   (Atlantic cod)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0
Danio_rerio_69_9   (Zebrafish)   0
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Homo_sapiens__(NCBI_version)   (Human)   0
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   0
NCBI_plasmid_sequences_(Plasmids) 0
Protozoadb_2010_08_(Protozoadb) 5
STRING_v9.0.5_(STRING) 8
Uniprot_2018_03_genome 1568
NCBI_2017_08_genome 263

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