SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 51197,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51197 - Clavaminate synthase-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   20
Pan_troglodytes_76_2.1.4   (Chimpanzee)   7
Gorilla_gorilla_76_3.1   (Western gorilla)   8
Pongo_abelii_76_2   (Sumatran orangutan)   5
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   6
Papio_anubis_76   (Olive baboon)   7
Macaca_mulatta_76_1   (Rhesus monkey)   7
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   11
Otolemur_garnettii_76_3   (Small-eared galago)   8
Microcebus_murinus_76_1   (Gray mouse lemur)   6
Rattus_norvegicus_76_5.0   (Norway rat)   9
Mus_musculus_76_38   (House mouse)   12
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   6
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   9
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   11
Cavia_porcellus_76_3   (Domestic guinea pig)   11
Oryctolagus_cuniculus_76_2   (Rabbit)   7
Ochotona_princeps_76   (American pika)   5
Tupaia_belangeri_76   (Northern tree shrew)   3
Sus_scrofa_76_10.2   (Pig)   11
Bos_taurus_76_3.1   (Cattle)   6
Ovis_aries_76_3.1   (Sheep)   6
Vicugna_pacos_76_1   (Alpaca)   6
Tursiops_truncatus_76_1   (Bottlenose dolphin)   6
Mustela_putorius_furo_76_1.0   (Domestic ferret)   6
Ailuropoda_melanoleuca_76_1   (Giant panda)   7
Canis_familiaris_76_3.1   (Dog)   6
Felis_catus_76_6.2   (Domestic cat)   4
Equus_caballus_76_2   (Horse)   8
Myotis_lucifugus_76_2.0   (Little brown bat)   10
Pteropus_vampyrus_76_1   (Large flying fox)   5
Sorex_araneus_76_1   (European shrew)   4
Erinaceus_europaeus_76   (Western European hedgehog)   4
Procavia_capensis_76_1   (Cape rock hyrax)   5
Loxodonta_africana_76_3   (African savanna elephant)   9
Echinops_telfairi_76   (Small Madagascar hedgehog)   6
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   4
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   4
Macropus_eugenii_76_1.0   (Tammar wallaby)   3
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   13
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   6
Ornithorhynchus_anatinus_76_5   (Platypus)   4
Saccoglossus_kowalevskii_v3.0 10
Petromyzon_marinus_76_7.0   (Sea lamprey)   4
Meleagris_gallopavo_76_2   (Turkey)   7
Gallus_gallus_76_4   (Chicken)   5
Anas_platyrhynchos_76_1.0   (Mallard)   10
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   7
Ficedula_albicollis_76_1.0   (Collared flycatcher)   8
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   8
Anolis_carolinensis_76_2.0   (Green anole)   5
Xenopus_laevis_   (African clawed frog)   11
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   7
Latimeria_chalumnae_76_1   (Coelacanth)   2
Lepisosteus_oculatus_76   (Spotted gar)   5
Gadus_morhua_76_1   (Atlantic cod)   6
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   6
Takifugu_rubripes_76_4   (Torafugu)   7
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   5
Oryzias_latipes_76_1   (Japanese medaka)   4
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   2
Poecilia_formosa_76   (Amazon molly)   3
Oreochromis_niloticus_76_1.0   (Nile tilapia)   4
Astyanax_mexicanus_76   (Mexican tetra)   4
Danio_rerio_76_9   (Zebrafish)   5
Oikopleura_dioica 5
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   11
Ciona_intestinalis_76   (Vase tunicate)   8
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   8
Adineta_vaga 17
Octopus_bimaculoides_280 3
Crassostrea_gigas_22   (Pacific oyster)   11
Lottia_gigantea_   (Owl limpet)   5
Helobdella_robusta_ 4
Capitella_sp._I_ 3
Danaus_plexippus_OGS1.0   (Monarch butterfly)   5
Heliconius_melpomene_   (Postman butterfly)   4
Bombyx_mori_   (Domestic silkworm)   3
Nasonia_vitripennis_   (Jewel wasp)   4
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   3
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   3
Linepithema_humile_v1.1   (Argentine ant)   4
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   4
Solenopsis_invicta_v.2.2.3   (Red fire ant)   2
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   4
Atta_cephalotes_v1.1 4
Camponotus_floridanus_v3.3   (Florida carpenter ant)   4
Lucilia_cuprina   (Australian sheep blowfly)   5
Drosophila_grimshawi_1.3 6
Drosophila_willistoni_1.3 6
Drosophila_pseudoobscura_2.13 7
Drosophila_persimilis_1.3 9
Drosophila_suzukii 5
Drosophila_yakuba_1.3 6
Drosophila_simulans_1.3 4
Drosophila_sechellia_1.3 5
Drosophila_melanogaster_76_5   (Fruit fly)   12
Drosophila_erecta_1.3 6
Drosophila_ananassae_1.3 7
Drosophila_virilis_1.2 6
Drosophila_mojavensis_1.3 6
Megaselia_scalaris_22 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   6
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   5
Anopheles_darlingi_22   (American malaria mosquito)   4
Anopheles_gambiae_49_3j   (African malaria mosquito)   5
Tribolium_castaneum_3.0   (Red flour beetle)   2
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   4
Acyrthosiphon_pisum_   (Pea aphid)   6
Rhodnius_prolixus_22 3
Daphnia_pulex_   (Common water flea)   8
Strigamia_maritima_22 1
Sarcoptes_scabiei 3
Tetranychus_urticae_   (Two-spotted spider mite)   5
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   3
Pristionchus_pacificus_ 8
Meloidogyne_incognita_   (Southern root-knot nematode)   3
Meloidogyne_hapla_ 2
Onchocerca_volvulus_22 2
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   6
Caenorhabditis_japonica_ 2
Caenorhabditis_brenneri_ 6
Caenorhabditis_remanei_ 3
Caenorhabditis_elegans_76_235   (Roundworm)   6
Caenorhabditis_briggsae_2 3
Trichinella_spiralis_22 2
Hymenolepis_microstoma_ 2
Echinococcus_multilocularis_ 1
Echinococcus_granulosus_ 1
Taenia_solium_   (Pork tapeworm)   1
Schistosoma_mansoni_ 4
Mnemiopsis_leidyi   (Sea walnut)   12
Thelohanellus_kitauei 1
Acropora_digitifera_v1.0 6
Nematostella_vectensis_1.0   (Starlet sea anemone)   7
Hydra_vulgaris 8
Amphimedon_queenslandica 6
Trichoplax_adhaerens_ 7
Proterospongia_sp._ATCC_50818_ 8
Monosiga_brevicollis_ 7
Sphaeroforma_arctica_JP610_ 7
Capsaspora_owczarzaki_ATCC_30864_ 4
Conidiobolus_coronatus_NRRL28638_v1.0 3
Mortierella_verticillata_NRRL_6337_ 8
Phycomyces_blakesleeanus_ 2
Rhizopus_oryzae_RA_99-880_ 2
Mucor_circinelloides_ 3
Rhizomucor_miehei_CAU432_ 1
Malassezia_globosa_CBS_7966_ 4
Sporisorium_reilianum_22 4
Ustilago_maydis_ 4
Mixia_osmundae_IAM_14324_v1.0 4
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 2
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 2
Melampsora_laricis-populina_ 3
Rhodotorula_graminis_WP1_v1.0 6
Sporobolomyces_roseus_IAM_13481_ 3
Microbotryum_violaceum_22 3
Wallemia_sebi_v1.0 2
Sphaerobolus_stellatus_v1.0 16
Piloderma_croceum_F_1598_v1.0 7
Serpula_lacrymans_var._lacrymans_S7.9_ 9
Coniophora_puteana 10
Hydnomerulius_pinastri_v2.0 3
Paxillus_rubicundulus_Ve08.2h10_v1.0 2
Pisolithus_microcarpus_441_v1.0 2
Pisolithus_tinctorius_Marx_270_v1.0 7
Scleroderma_citrinum_Foug_A_v1.0 6
Coprinopsis_cinerea_okayama7_130_v3 3
Pleurotus_ostreatus_   (Oyster mushroom)   13
Amanita_thiersii_Skay4041_v1.0 5
Amanita_muscaria_Koide_v1.0   (Fly agaric)   5
Galerina_marginata_v1.0 8
Hebeloma_cylindrosporum_h7_v2.0 6
Laccaria_bicolor_S238N-H82_ 8
Agaricus_bisporus_var._bisporus_ 8
Schizophyllum_commune_ 8
Stereum_hirsutum_FP-91666_SS1__v1.0 13
Heterobasidion_annosum_ 10
Gloeophyllum_trabeumv1.0 10
Punctularia_strigosozonata_v1.0 9
Sebacina_vermifera_MAFF_305830_v1.0 4
Fomitiporia_mediterranea_v1.0 16
Tulasnella_calospora_AL13/4D_v1.0 3
Postia_placenta_ 24
Wolfiporia_cocos_MD-104_SS10__v1.0 18
Fomitopsis_pinicolav1.0 21
Fomitopsis_pinicola_FP-58527_SS1_v3.0 19
Phanerochaete_chrysosporium_RP-78_2.1 8
Dichomitus_squalens 25
Trametes_versicolor_v1.0 18
Tremella_mesenterica_   (Witches' butter)   5
Daldinia_eschscholzii_EC12_v1.0 11
Apiospora_montagnei_NRRL_25634_v1.0 10
Magnaporthe_poae_ATCC_64411_22 5
Magnaporthe_grisea_70-15_ 8
Podospora_anserina_ 6
Sporotrichum_thermophile_ATCC_42464_ 6
Thielavia_terrestris_NRRL_8126_ 6
Chaetomium_globosum_CBS_148.51_ 5
Neurospora_tetrasperma_ 5
Neurospora_discreta_FGSC_8579_ 4
Neurospora_crassa_OR74A_ 5
Cryphonectria_parasitica_   (Chestnut blight fungus)   10
Verticillium_albo-atrum_VaMs.102_ 8
Verticillium_dahliae_VdLs.17_ 8
Acremonium_alcalophilumv_1.0 5
Glomerella_graminicola_22 11
Fusarium_graminearum_ 9
Nectria_haematococca_mpVI_ 12
Fusarium_oxysporum_f._sp._lycopersici_4286_ 7
Fusarium_verticillioides_7600_ 9
Trichoderma_asperellum_CBS_433.97_v1.0 7
Trichoderma_atroviride_ 5
Trichoderma_citrinoviride_v1.0 7
Trichoderma_reesei_1.2 6
Trichoderma_virens_Gv29-8_ 8
Trichoderma_longibrachiatum_ATCC_18648_v1.0 5
Trichoderma_harzianum_CBS_226.95_v1.0 6
Amorphotheca_resinae_v1.0   (Creosote fungus)   6
Botrytis_cinerea_B05.10_ 7
Sclerotinia_sclerotiorum_ 8
Blumeria_graminis_22 1
Didymella_exigua_CBS_183.55_v1.0 8
Leptosphaeria_maculans_22 3
Setosphaeria_turcica_v1.0 6
Cochliobolus_miyabeanus_ATCC_44560_v1.0 5
Cochliobolus_victoriae_FI3_v1.0 4
Cochliobolus_carbonum_26-R-13_v1.0 4
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   3
Alternaria_brassicicola_ 7
Cochliobolus_lunatus_m118_v2.0 4
Pyrenophora_teres_f._teres_22 7
Pyrenophora_tritici-repentis_ 6
Stagonospora_nodorum_ 7
Mycosphaerella_graminicola_IPO323_ 5
Zasmidium_cellare_ATCC_36951_v1.0 7
Dothistroma_septosporum 4
Septoria_musiva_v1.0 4
Mycosphaerella_fijiensis_CIRAD86_ 7
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 4
Paracoccidioides_brasiliensis_Pb18_ 6
Coccidioides_posadasii_RMSCC_3488_ 3
Coccidioides_immitis_RS_ 5
Ajellomyces_dermatitidis_SLH14081_ 5
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 3
Microsporum_canis_CBS_113480_ 4
Trichophyton_equinum_CBS_127.97_ 3
Trichophyton_verrucosum_HKI_0517_ 2
Arthroderma_benhamiae_CBS_112371_ 3
Trichophyton_tonsurans_CBS_112818_ 3
Trichophyton_rubrum_CBS_118892_ 4
Uncinocarpus_reesii_1704_ 3
Aspergillus_zonatus_v1.0 4
Penicillium_chrysogenum_Wisconsin_54-1255_ 7
Penicillium_chrysogenum_v1.0 6
Aspergillus_acidus_v1.0 6
Aspergillus_fumigatus_Af293 3
Aspergillus_brasiliensis_v1.0 7
Aspergillus_nidulans_FGSC_A4_ 4
Aspergillus_sydowii_v1.0 7
Aspergillus_versicolor_v1.0 12
Aspergillus_glaucus 5
Aspergillus_carbonarius_ITEM_5010_ 6
Neosartorya_fischeri_NRRL_181_ 4
Aspergillus_terreus_NIH2624_ 1
Aspergillus_tubingensis_v1.0 7
Aspergillus_wentii_v1.0 8
Aspergillus_oryzae_RIB40_ 5
Aspergillus_niger_22 11
Aspergillus_niger_ATCC_1015_ 4
Aspergillus_flavus_NRRL3357_ 3
Aspergillus_clavatus_NRRL_1_ 2
Penicillium_marneffei_ATCC_18224_ 5
Tuber_melanosporum_Mel28_22 3
Tuber_melanosporum_Vittad_   (Perigord truffle)   3
Hansenula_polymorpha_v2.0 5
Dekkera_bruxellensis_CBS_2499_v2.0 0
Pichia_membranifaciensv1.0 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1
Candida_dubliniensis_CD36_ 3
Candida_tropicalis_MYA-3404_ 1
Candida_parapsilosis_ 0
Candida_albicans_SC5314 2
Lodderomyces_elongisporus_NRRL_YB-4239_ 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 2
Pichia_stipitis_CBS_6054_ 2
Candida_guilliermondii_ATCC_6260_ 0
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 3
Debaromyces_hansenii 0
Wickerhamomyces_anomalus 3
Pichia_pastoris_GS115_ 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 0
Yarrowia_lipolytica_CLIB122 2
Candida_lusitaniae_ATCC_42720_ 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 0
Vanderwaltozyma_polyspora_DSM_70294_ 0
Candida_glabrata_CBS138 0
Kluyveromyces_thermotolerans_CBS_6340 0
Lachancea_kluyveri_ 2
Kluyveromyces_waltii 1
Ashbya_gossypii_ATCC_10895_ 0
Zygosaccharomyces_rouxii_ 0
Saccharomyces_mikatae_MIT 0
Saccharomyces_paradoxus_MIT 0
Saccharomyces_cerevisiae_76   (Baker's yeast)   0
Saccharomyces_bayanus_MIT 0
Kluyveromyces_lactis 0
Schizosaccharomyces_cryophilus_OY26_22 2
Schizosaccharomyces_octosporus_yFS286_ 2
Schizosaccharomyces_japonicus_yFS275_ 1
Schizosaccharomyces_pombe   (Fission yeast)   2
Catenaria_anguillulae_PL171_v1.0 5
Allomyces_macrogynus_ATCC_38327_ 9
Spizellomyces_punctatus_DAOM_BR117_ 4
Dictyostelium_discoideum 1
Dictyostelium_purpureum_ 1
Selaginella_moellendorffii_ 9
Pinus_taeda   (Loblolly pine)   11
Picea_abies   (Norway spruce)   10
Eucalyptus_grandis_v201   (Rose gum)   13
Theobroma_cacao_B97-61/B2_v1   (Cacao)   6
Gossypium_raimondii_v221 21
Citrus_clementina_v165 9
Citrus_sinensis_v154   (Sweet orange)   10
Thellungiella_halophila_v173 7
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   10
Capsella_rubella_v183 7
Arabidopsis_lyrata_   (Lyrate rockcress)   5
Arabidopsis_thaliana_10   (Thale cress)   8
Carica_papaya_   (Papaya)   6
Medicago_truncatula_   (Barrel medic)   6
Phaseolus_vulgaris_v186   (French bean)   5
Glycine_max_v109   (Soybean)   14
Cucumis_sativus_v122   (Cucumber)   4
Fragaria_vesca_   (Wild strawberry)   22
Malus_domestica_v196   (Apple)   33
Prunus_persica_v139   (Peach)   3
Linum_usitatissimum_v200   (Flax)   13
Manihot_esculenta_v147   (Cassava)   3
Populus_trichocarpa_v156   (Black cottonwood)   4
Vitis_vinifera_   (Wine grape)   8
Mimulus_guttatus_v140   (Spotted monkey flower)   6
Solanum_lycopersicum_v.2.3   (Tomato)   7
Solanum_tuberosum_   (Potato)   16
Actinidia_chinensis_Hongyang_ 13
Aquilegia_coerulea_v195 5
Triticum_urartu_22 8
Triticum_aestivum_22   (Bread wheat)   30
Aegilops_tauschii_22 10
Brachypodium_distachyon_   (Stiff brome)   9
Oryza_barthii_22   (African wild rice)   17
Oryza_meridionalis_22 17
Oryza_glumaepatula_22 16
Oryza_glaberrima   (African rice)   14
Oryza_punctata_22 14
Oryza_nivara_22 30
Oryza_brachyantha_22   (Malo sina)   11
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   29
Oryza_sativa_v193   (Rice)   29
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   11
Panicum_virgatum_v202   (Switchgrass)   24
Setaria_italica_v164   (Foxtail millet)   13
Zea_mays_subsp._mays_   (Maize)   21
Zea_mays_v181   (Maize)   24
Sorghum_bicolor_   (Sorghum)   9
Musa_balbisiana   (Balbis banana)   14
Musa_acuminata_22   (Wild Malaysian banana)   6
Amborella_trichopoda_22 3
Physcomitrella_patens 7
Coccomyxa_subellipsoidea_sp._C-169_v2 9
Asterochloris_sp._Cgr/DA1pho_v1.0 4
Chlorella_variabilis_sp._NC64A_ 5
Chlorella_vulgaris_ 10
Volvox_carteri_f._nagariensis_ 7
Volvox_carteri_v199 5
Chlamydomonas_reinhardtii_4.0 9
Ostreococcus_sp._RCC809_ 8
Ostreococcus_lucimarinus_CCE9901_ 10
Ostreococcus_tauri_ 8
Bathycoccus_prasinos_ 8
Micromonas_sp._RCC299_ 10
Micromonas_pusilla_CCMP1545_v3.0 12
Cyanidioschyzon_merolae_strain_10D_22 0
Cyanidioschyzon_merolae 0
Porphyridium_purpureum_02_2012 5
Thecamonas_trahens_ATCC_50062_ 8
Bigelowiella_natans_CCMP2755_22 19
Cyanophora_paradoxa_ 2
Leishmania_mexicana_2.4 1
Leishmania_major_strain_Friedlin_ 2
Leishmania_infantum_JPCM5_2.4 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 2
Trypanosoma_vivax_ 1
Trypanosoma_cruzi_strain_CL_Brener 1
Trypanosoma_congolense_2.4 1
Trypanosoma_brucei_gambiense_v4.1 2
Trypanosoma_brucei_TREU927_v4.1 2
Ectocarpus_siliculosus 9
Aureococcus_anophagefferens_ 15
Albugo_laibachii_22 2
Pythium_iwayamai_DAOM_BR242034_22 2
Pythium_arrhenomanes_ATCC_12531_22 6
Pythium_ultimum_v1.7-2 9
Pythium_aphanidermatum_DAOM_BR444_22 5
Pythium_irregulare_DAOM_BR486_22 5
Pythium_vexans_DAOM_BR484_22 5
Phytophthora_ramorum_1.1   (Sudden oak death agent)   5
Phytophthora_sojae_1.1 3
Phytophthora_infestans_T30-4_ 4
Phytophthora_capsici_ 5
Hyaloperonospora_arabidopsidis_22 6
Phaeodactylum_tricornutumCCAP_1055/1 4
Fragilariopsis_cylindrus 18
Thalassiosira_pseudonana_CCMP1335 11
Perkinsus_marinus_ATCC_50983_ 11
Paramecium_tetraurelia_ 8
Tetrahymena_thermophila_SB210_1_ 0
Ichthyophthirius_multifiliis_strain_G5_ 4
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Babesia_bovis_T2Bo_ 0
Theileria_parva__ 1
Theileria_annulata 0
Plasmodium_falciparum_3D7_ 1
Plasmodium_vivax_SaI-1_7.0 0
Plasmodium_knowlesi_strain_H_ 1
Plasmodium_chabaudi_ 1
Plasmodium_berghei_ANKA_ 1
Symbiodinium_minutum_clade_B1_v1.2 40
Naegleria_gruberi_ 2
Guillardia_theta_CCMP2712_v1.0_ 7
Emiliania_huxleyi_CCMP1516_ 46
Acaryochloris_marina_MBIC11017 1
Synechococcus_elongatus_PCC_7942 1
Trichodesmium_erythraeum_IMS101 5
Nostoc_sp._PCC_7107 1
Nakamurella_multipartita_DSM_44233 1
Modestobacter_marinus 1
Blastococcus_saxobsidens_DD2 1
Geodermatophilus_obscurus_DSM_43160 1
Kineococcus_radiotolerans_SRS30216 1
Catenulispora_acidiphila_DSM_44928 1
Stackebrandtia_nassauensis_DSM_44728 2
Frankia_symbiont_of_Datisca_glomerata 1
Frankia_sp._EAN1pec 1
Frankia_alni_ACN14a 2
Thermobifida_fusca_YX 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1
Streptosporangium_roseum_DSM_43021 1
Kitasatospora_setae_KM-6054 1
Streptomyces_sp._PAMC26508 1
Streptomyces_flavogriseus_ATCC_33331 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Streptomyces_scabiei_87.22 3
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 2
Actinosynnema_mirum_DSM_43827 1
Kribbella_flavida_DSM_17836 2
Microlunatus_phosphovorus_NM-1 0
Salinispora_arenicola_CNS-205 1
Salinispora_tropica_CNB-440 1
Verrucosispora_maris_AB-18-032 1
Micromonospora_sp._L5 1
Micromonospora_aurantiaca_ATCC_27029 1
Actinoplanes_sp._N902-109 1
Actinoplanes_sp._SE50/110 1
Actinoplanes_missouriensis_431 1
Segniliparus_rotundus_DSM_44985 1
Gordonia_polyisoprenivorans_VH2 1
Gordonia_bronchialis_DSM_43247 1
Mycobacterium_abscessus_ATCC_19977 1
Mycobacterium_sp._JLS 1
Mycobacterium_intracellulare_ATCC_13950 2
Mycobacterium_canettii_CIPT_140010059 0
Mycobacterium_africanum_GM041182 0
Mycobacterium_tuberculosis_KZN_1435 0
Mycobacterium_tuberculosis 0
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 0
Mycobacterium_rhodesiae_NBB3 2
Mycobacterium_ulcerans_Agy99 0
Mycobacterium_gilvum_PYR-GCK 1
Mycobacterium_chubuense_NBB4 1
Mycobacterium_marinum_M 0
Kytococcus_sedentarius_DSM_20547 1
Intrasporangium_calvum_DSM_43043 1
Arthrobacter_aurescens_TC1 1
Arthrobacter_sp._Rue61a 1
Salinibacter_ruber_M8 1
Rhodothermus_marinus_DSM_4252 1
Parachlamydia_acanthamoebae_UV-7 1
Simkania_negevensis_Z 1
Bdellovibrio_bacteriovorus_HD100 1
Haliangium_ochraceum_DSM_14365 2
Sorangium_cellulosum_'So_ce_56' 1
Stigmatella_aurantiaca_DW4/3-1 2
Corallococcus_coralloides_DSM_2259 1
Myxococcus_xanthus_DK_1622 5
Myxococcus_fulvus_HW-1 6
Azoarcus_sp._BH72 1
Pseudogulbenkiania_sp._NH8B 1
Laribacter_hongkongensis_HLHK9 1
Chromobacterium_violaceum_ATCC_12472 1
Neisseria_meningitidis_alpha14 1
Neisseria_meningitidis_FAM18 2
Neisseria_gonorrhoeae_NCCP11945 1
beta_proteobacterium_CB 1
Methylibium_petroleiphilum_PM1 1
Thiomonas_arsenitoxydans 1
Thiomonas_intermedia_K12 1
Rubrivivax_gelatinosus_IL144 1
Leptothrix_cholodnii_SP-6 1
Burkholderia_rhizoxinica_HKI_454 2
Burkholderia_phytofirmans_PsJN 2
Burkholderia_phymatum_STM815 2
Burkholderia_xenovorans_LB400 2
Ralstonia_eutropha_JMP134 1
Cupriavidus_taiwanensis_LMG_19424 1
Cupriavidus_metallidurans_CH34 1
Cupriavidus_necator_N-1 2
Ralstonia_eutropha_H16 1
Ralstonia_pickettii_12D 1
Ralstonia_solanacearum_CFBP2957 1
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 1
Burkholderia_sp._RPE64 2
Burkholderia_sp._CCGE1002 2
Burkholderia_thailandensis_E264 3
Burkholderia_pseudomallei_1106a 2
Burkholderia_mallei_SAVP1 3
Burkholderia_ambifaria_AMMD 2
Burkholderia_cenocepacia_HI2424 2
Burkholderia_multivorans_ATCC_17616 3
Burkholderia_vietnamiensis_G4 2
Burkholderia_gladioli_BSR3 3
Burkholderia_glumae_BGR1 2
Verminephrobacter_eiseniae_EF01-2 1
Alicycliphilus_denitrificans_K601 1
Ramlibacter_tataouinensis_TTB310 2
Delftia_sp._Cs1-4 2
Delftia_acidovorans_SPH-1 2
Polaromonas_sp._JS666 1
Polaromonas_naphthalenivorans_CJ2 1
Variovorax_paradoxus_S110 1
Rhodoferax_ferrireducens_T118 1
Acidovorax_ebreus_TPSY 1
Acidovorax_sp._KKS102 1
Acidovorax_sp._JS42 1
Acidovorax_citrulli_AAC00-1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1
Comamonas_testosteroni_CNB-2 1
Herminiimonas_arsenicoxydans 1
Collimonas_fungivorans_Ter331 2
Janthinobacterium_sp._Marseille 1
Herbaspirillum_seropedicae_SmR1 1
Pusillimonas_sp._T7-7 1
Advenella_kashmirensis_WT001 1
Taylorella_asinigenitalis_MCE3 1
Taylorella_equigenitalis_MCE9 1
Bordetella_petrii_DSM_12804 1
Bordetella_avium_197N 1
Bordetella_pertussis_Tohama_I 1
Bordetella_parapertussis_12822 1
Bordetella_bronchiseptica_RB50 1
Achromobacter_xylosoxidans_A8 1
Achromobacter_xylosoxidans 1
Thiobacillus_denitrificans_ATCC_25259 1
Nitrosospira_multiformis_ATCC_25196 1
Nitrosomonas_sp._Is79A3 1
Sideroxydans_lithotrophicus_ES-1 1
Gallionella_capsiferriformans_ES-2 1
Methylotenera_versatilis_301 1
Methylotenera_mobilis_JLW8 1
Methylovorus_sp._MP688 1
Methylovorus_glucosetrophus_SIP3-4 1
Methylobacillus_flagellatus_KT 2
Sphingobium_sp._SYK-6 1
Sphingobium_japonicum_UT26S 1
Sphingobium_chlorophenolicum_L-1 1
Maricaulis_maris_MCS10 1
Hirschia_baltica_ATCC_49814 1
Jannaschia_sp._CCS1 1
Tistrella_mobilis_KA081020-065 2
Azospirillum_lipoferum_4B 2
Methylobacterium_sp._4-46 1
Agrobacterium_vitis_S4 1
Bartonella_tribocorum_CIP_105476 1
Bartonella_bacilliformis_KC583 1
Saccharophagus_degradans_2-40 1
Teredinibacter_turnerae_T7901 1
Cellvibrio_japonicus_Ueda107 1
Aggregatibacter_aphrophilus_NJ8700 1
Aggregatibacter_actinomycetemcomitans_D7S-1 1
Gallibacterium_anatis_UMN179 2
Pasteurella_multocida_subsp._multocida_str._3480 1
Haemophilus_parasuis_SH0165 1
Haemophilus_ducreyi_35000HP 1
Haemophilus_parainfluenzae_T3T1 1
Haemophilus_influenzae_PittEE 1
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1
Oceanimonas_sp._GK1 1
Tolumonas_auensis_DSM_9187 1
Aeromonas_veronii_B565 1
Aeromonas_salmonicida_subsp._salmonicida_A449 2
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 2
Aliivibrio_salmonicida_LFI1238 1
Vibrio_fischeri_MJ11 1
Vibrio_splendidus_LGP32 1
Photobacterium_profundum_SS9 1
Psychromonas_ingrahamii_37 1
Psychromonas_sp._CNPT3 1
Idiomarina_loihiensis_L2TR 1
Ferrimonas_balearica_DSM_9799 1
Shewanella_piezotolerans_WP3 2
Shewanella_loihica_PV-4 1
Shewanella_halifaxensis_HAW-EB4 1
Shewanella_sediminis_HAW-EB3 1
Shewanella_denitrificans_OS217 1
Shewanella_pealeana_ATCC_700345 2
Shewanella_oneidensis_MR-1 1
Shewanella_baltica_OS185 2
Shewanella_woodyi_ATCC_51908 2
Shewanella_sp._MR-4 1
Shewanella_amazonensis_SB2B 1
Shewanella_violacea_DSS12 2
Shewanella_frigidimarina_NCIMB_400 1
Shewanella_putrefaciens_CN-32 2
Colwellia_psychrerythraea_34H 1
Pseudoalteromonas_sp._SM9913 1
Pseudoalteromonas_atlantica_T6c 1
Pseudoalteromonas_haloplanktis_TAC125 1
Glaciecola_sp._4H-3-7+YE-5 1
Glaciecola_nitratireducens_FR1064 2
Marinobacter_adhaerens_HP15 1
Marinobacter_sp._BSs20148 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 1
Marinobacter_aquaeolei_VT8 1
Alteromonas_sp._SN2 1
Alteromonas_macleodii_str._'Deep_ecotype' 1
Kangiella_koreensis_DSM_16069 1
Hahella_chejuensis_KCTC_2396 1
Alcanivorax_borkumensis_SK2 1
Marinomonas_posidonica_IVIA-Po-181 1
Marinomonas_sp._MWYL1 1
Marinomonas_mediterranea_MMB-1 1
Chromohalobacter_salexigens_DSM_3043 1
Halomonas_elongata_DSM_2581 1
Rhodanobacter_denitrificans 1
Frateuria_aurantia_DSM_6220 1
Pseudoxanthomonas_spadix_BD-a59 1
Pseudoxanthomonas_suwonensis_11-1 0
Stenotrophomonas_maltophilia_K279a 1
Xylella_fastidiosa_M23 1
Xanthomonas_axonopodis_pv._citri_str._306 1
Xanthomonas_albilineans_GPE_PC73 1
Xanthomonas_oryzae_pv._oryzae_PXO99A 1
Xanthomonas_campestris_pv._campestris_str._B100 1
Halothiobacillus_neapolitanus_c2 1
Thioalkalivibrio_sulfidophilus_HL-EbGr7 1
Thioalkalivibrio_sp._K90mix 1
Legionella_longbeachae_NSW150 2
Legionella_pneumophila_str._Corby 1
gamma_proteobacterium_HdN1 1
Photorhabdus_asymbiotica 1
Photorhabdus_luminescens_subsp._laumondii_TTO1 2
Xenorhabdus_bovienii_SS-2004 3
Xenorhabdus_nematophila_ATCC_19061 1
Providencia_stuartii_MRSN_2154 1
Proteus_mirabilis_HI4320 1
Edwardsiella_ictaluri_93-146 1
Edwardsiella_tarda_EIB202 1
Rahnella_sp._Y9602 2
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 2
Yersinia_pseudotuberculosis_IP_31758 3
Yersinia_pestis_Pestoides_F 2
Yersinia_enterocolitica_subsp._enterocolitica_8081 3
Serratia_sp._AS12 1
Serratia_sp._ATCC_39006 1
Serratia_plymuthica_AS9 1
Serratia_proteamaculans_568 3
Dickeya_dadantii_Ech703 2
Dickeya_zeae_Ech1591 2
Pectobacterium_wasabiae_WPP163 2
Pectobacterium_sp._SCC3193 2
Pectobacterium_atrosepticum_SCRI1043 2
Pectobacterium_carotovorum_subsp._carotovorum_PC1 2
Pantoea_sp._At-9b 1
Pantoea_vagans_C9-1 1
Pantoea_ananatis_LMG_20103 1
Erwinia_tasmaniensis_Et1/99 2
Erwinia_sp._Ejp617 1
Erwinia_billingiae_Eb661 1
Erwinia_pyrifoliae_Ep1/96 1
Erwinia_amylovora_ATCC_49946 1
Escherichia_blattae_DSM_4481 1
Cronobacter_turicensis_z3032 2
Cronobacter_sakazakii_ES15 1
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 3
Enterobacteriaceae_bacterium_strain_FGI_57 2
Shigella_sonnei_Ss046 1
Shigella_flexneri_5_str._8401 1
Shigella_dysenteriae_Sd197 1
Shigella_boydii_CDC_3083-94 1
Salmonella_bongori_NCTC_12419 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1
Klebsiella_oxytoca_E718 2
Klebsiella_variicola_At-22 2
Klebsiella_pneumoniae_NTUH-K2044 2
Enterobacter_aerogenes_KCTC_2190 2
Escherichia_fergusonii_ATCC_35469 1
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1
Enterobacter_sp._R4-368 2
Enterobacter_sp._638 2
Enterobacter_asburiae_LF7a 2
Enterobacter_cloacae_subsp._dissolvens_SDM 2
Citrobacter_rodentium_ICC168 1
Citrobacter_koseri_ATCC_BAA-895 0
Azotobacter_vinelandii_DJ 1
Pseudomonas_sp._TKP 1
Pseudomonas_sp._UW4 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1
Pseudomonas_entomophila_L48 1
Pseudomonas_syringae_pv._tomato_str._DC3000 1
Pseudomonas_stutzeri_A1501 1
Pseudomonas_fulva_12-X 1
Pseudomonas_putida_F1 1
Pseudomonas_protegens_Pf-5 1
Pseudomonas_fluorescens_SBW25 1
Pseudomonas_mendocina_ymp 1
Pseudomonas_aeruginosa_UCBPP-PA14 1
Pseudomonas_sp._VLB120 1
Psychrobacter_sp._G 1
Psychrobacter_sp._PRwf-1 1
Psychrobacter_arcticus_273-4 1
Psychrobacter_cryohalolentis_K5 1
Moraxella_catarrhalis_RH4 2
Acinetobacter_oleivorans_DR1 1
Acinetobacter_calcoaceticus_PHEA-2 1
Acinetobacter_baumannii_ATCC_17978 2
Acinetobacter_sp._ADP1 1
Methylophaga_sp._JAM1 1
Thiomicrospira_crunogena_XCL-2 1
Thioalkalimicrobium_cyclicum_ALM1 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   5
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   8
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   5
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   3
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   5
Cryptococcus_neoformans_var._grubii_H99_ 4
Cryptococcus_neoformans_B-3501A_ 6
Cryptococcus_neoformans_JEC21_ 5
Paracoccidioides_brasiliensis_Pb01_ 5
Paracoccidioides_brasiliensis_Pb03_ 5
Coccidioides_posadasii_str._Silveira_ 2
Coccidioides_immitis_RMSCC_3703_ 4
Coccidioides_immitis_RMSCC_2394_ 4
Coccidioides_immitis_H538.4_ 4
Ajellomyces_dermatitidis_ER-3_ 4
Histoplasma_capsulatum_H143 6
Histoplasma_capsulatum_H88 6
Histoplasma_capsulatum_G186AR 6
Aspergillus_fumigatus_A1163_ 2
Candida_albicans_WO-1_ 3
Saccharomyces_cerevisiae_UC5 1
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_FL100 0
Saccharomyces_cerevisiae_CBS7960 1
Saccharomyces_cerevisiae_YJM269 0
Saccharomyces_cerevisiae_T7 0
Saccharomyces_cerevisiae_FostersB 2
Saccharomyces_cerevisiae_FostersO 0
Saccharomyces_cerevisiae_VL3 1
Saccharomyces_cerevisiae_Vin13 0
Saccharomyces_cerevisiae_LalvinQA23 0
Saccharomyces_cerevisiae_AWRI796 1
Saccharomyces_cerevisiae_Sigma1278b 0
Saccharomyces_cerevisiae_W303 0
Saccharomyces_cerevisiae_JAY291 0
Saccharomyces_cerevisiae_AWRI1631 0
Saccharomyces_cerevisiae_YPS163 0
Saccharomyces_cerevisiae_T73 0
Saccharomyces_cerevisiae_CLIB215 0
Saccharomyces_cerevisiae_YJM789_ 0
Saccharomyces_cerevisiae_YJM789 0
Saccharomyces_cerevisiae_RM11-1a 1
Saccharomyces_cerevisiae_RM11-1a_ 0
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   0
Schizosaccharomyces_pombe_972h-_ 2
Batrachochytrium_dendrobatidis_JEL423_ 1
Batrachochytrium_dendrobatidis_JAM81_ 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   8
Hordeum_vulgare_22   (Domesticated barley)   22
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   18
Trypanosoma_brucei_Lister_427_v4.1 2
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 1
Plasmodium_falciparum_Dd2_ 0
Chamaesiphon_minutus_PCC_6605 1
Synechococcus_sp._WH_7803 1
Oscillatoria_acuminata_PCC_6304 1
Arthrospira_platensis_NIES-39 1
Cyanothece_sp._PCC_7822 1
Cyanobacterium_aponinum_PCC_10605 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1
Cylindrospermum_stagnale_PCC_7417 0
Frankia_sp._EuI1c 1
Frankia_sp._CcI3 1
Nocardiopsis_alba_ATCC_BAA-2165 1
Streptomyces_albus_J1074 2
Streptomyces_davawensis_JCM_4913 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 2
Saccharothrix_espanaensis_DSM_44229 1
Amycolatopsis_orientalis_HCCB10007 2
Actinoplanes_friuliensis_DSM_7358 1
Rhodococcus_pyridinivorans_SB3094 1
Nocardia_brasiliensis_ATCC_700358 2
Mycobacterium_sp._MOTT36Y 3
Mycobacterium_sp._JDM601 1
Mycobacterium_abscessus_subsp._bolletii_50594 1
Mycobacterium_liflandii_128FXT 0
Mycobacterium_sp._KMS 1
Mycobacterium_sp._MCS 1
Mycobacterium_yongonense_05-1390 2
Mycobacterium_intracellulare_MOTT-64 2
Mycobacterium_indicus_pranii_MTCC_9506 2
Mycobacterium_intracellulare_MOTT-02 2
Mycobacterium_avium_subsp._paratuberculosis_MAP4 1
Mycobacterium_avium_subsp._paratuberculosis_K-10 1
Mycobacterium_canettii_CIPT_140070017 0
Mycobacterium_canettii_CIPT_140060008 0
Mycobacterium_canettii_CIPT_140070008 0
Mycobacterium_canettii_CIPT_140070010 0
Mycobacterium_tuberculosis_EAI5/NITR206 0
Mycobacterium_tuberculosis_EAI5 0
Mycobacterium_tuberculosis_CAS/NITR204 0
Mycobacterium_tuberculosis_str._Beijing/NITR203 0
Mycobacterium_tuberculosis_UT205 0
Mycobacterium_tuberculosis_RGTB423 0
Mycobacterium_tuberculosis_RGTB327 0
Mycobacterium_tuberculosis_CTRI-2 0
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 0
Mycobacterium_tuberculosis_KZN_605 0
Mycobacterium_tuberculosis_KZN_4207 0
Mycobacterium_tuberculosis_CCDC5180 0
Mycobacterium_tuberculosis_CCDC5079 0
Mycobacterium_tuberculosis_CCDC5079 0
Mycobacterium_tuberculosis_H37Ra 0
Mycobacterium_tuberculosis_str._Haarlem/NITR202 0
Mycobacterium_tuberculosis_str._Haarlem 0
Mycobacterium_tuberculosis_F11 0
Mycobacterium_tuberculosis_H37Rv 0
Mycobacterium_tuberculosis_CDC1551 0
Mycobacterium_bovis_AF2122/97 0
Mycobacterium_bovis_BCG_str._Korea_1168P 0
Mycobacterium_bovis_BCG_str._Mexico 0
Mycobacterium_bovis_BCG_str._Tokyo_172 0
Mycobacterium_gilvum_Spyr1 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1
Salinibacter_ruber_DSM_13855 1
Rhodothermus_marinus_SG0.5JP17-172 1
Nonlabens_dokdonensis_DSW-6 1
Bdellovibrio_bacteriovorus_str._Tiberius 1
Sorangium_cellulosum_So0157-2 1
Myxococcus_stipitatus_DSM_14675 2
Neisseria_meningitidis_G2136 1
Neisseria_meningitidis_M04-240196 1
Neisseria_meningitidis_M01-240149 1
Neisseria_meningitidis_NZ-05/33 1
Neisseria_meningitidis_M01-240355 1
Neisseria_meningitidis_8013 1
Neisseria_meningitidis_053442 1
Neisseria_meningitidis_H44/76 1
Neisseria_meningitidis_alpha710 1
Neisseria_meningitidis_MC58 1
Neisseria_gonorrhoeae_TCDC-NG08107 1
Neisseria_gonorrhoeae_FA_1090 1
Burkholderia_phenoliruptrix_BR3459a 2
Pandoraea_pnomenusa_3kgm 1
Ralstonia_pickettii_12J 1
Ralstonia_solanacearum_FQY_4 2
Ralstonia_solanacearum_Po82 1
Ralstonia_solanacearum_PSI07 1
Ralstonia_solanacearum_CMR15 2
Ralstonia_solanacearum_GMI1000 2
Polynucleobacter_necessarius_subsp._necessarius_STIR1 1
Burkholderia_sp._YI23 2
Burkholderia_sp._CCGE1003 2
Burkholderia_sp._CCGE1001 2
Burkholderia_sp._KJ006 2
Burkholderia_thailandensis_MSMB121 3
Burkholderia_pseudomallei_MSHR305 2
Burkholderia_pseudomallei_NCTC_13179 2
Burkholderia_pseudomallei_BPC006 2
Burkholderia_pseudomallei_1026b 2
Burkholderia_pseudomallei_MSHR346 1
Burkholderia_pseudomallei_668 2
Burkholderia_pseudomallei_1710b 2
Burkholderia_pseudomallei_K96243 2
Burkholderia_mallei_NCTC_10229 3
Burkholderia_mallei_NCTC_10247 3
Burkholderia_mallei_ATCC_23344 2
Burkholderia_lata 2
Burkholderia_ambifaria_MC40-6 3
Burkholderia_cenocepacia_MC0-3 2
Burkholderia_cenocepacia_AU_1054 2
Burkholderia_cenocepacia_J2315 2
Burkholderia_multivorans_ATCC_17616 3
Burkholderia_cepacia_GG4 1
Alicycliphilus_denitrificans_BC 1
Variovorax_paradoxus_B4 1
Variovorax_paradoxus_EPS 1
Taylorella_asinigenitalis_14/45 1
Taylorella_equigenitalis_14/56 1
Taylorella_equigenitalis_ATCC_35865 1
Bordetella_pertussis_CS 1
Bordetella_parapertussis_18323 1
Bordetella_parapertussis_Bpp5 1
Bordetella_bronchiseptica_MO149 1
Bordetella_bronchiseptica_253 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Nitrosomonas_sp._AL212 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 1
Simiduia_agarivorans_SA1_=_DSM_21679 1
Mannheimia_succiniciproducens_MBEL55E 1
Bibersteinia_trehalosi_USDA-ARS-USMARC-192 1
Aggregatibacter_actinomycetemcomitans_ANH9381 1
Aggregatibacter_actinomycetemcomitans_D11S-1 1
Mannheimia_haemolytica_USMARC_2286 2
Mannheimia_haemolytica_M42548 2
Mannheimia_haemolytica_D174 1
Mannheimia_haemolytica_D171 1
Mannheimia_haemolytica_D153 1
Mannheimia_haemolytica_USDA-ARS-USMARC-183 2
Mannheimia_haemolytica_USDA-ARS-USMARC-185 2
Pasteurella_multocida_36950 1
Pasteurella_multocida_subsp._multocida_str._HN06 1
Pasteurella_multocida_subsp._multocida_str._Pm70 1
Haemophilus_parasuis_ZJ0906 1
Haemophilus_influenzae_KR494 1
Haemophilus_influenzae_F3047 1
Haemophilus_influenzae_F3031 1
Haemophilus_influenzae_10810 1
Haemophilus_influenzae_PittGG 1
Haemophilus_influenzae_86-028NP 1
Haemophilus_influenzae_R2866 1
Haemophilus_influenzae_R2846 1
Haemophilus_influenzae_Rd_KW20 1
Actinobacillus_suis_H91-0380 1
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 2
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 2
Aeromonas_hydrophila_ML09-119 2
Vibrio_fischeri_ES114 1
Vibrio_nigripulchritudo_VibrioScope 1
Idiomarina_loihiensis_GSL_199 1
Shewanella_sp._W3-18-1 2
Shewanella_sp._ANA-3 1
Shewanella_baltica_BA175 2
Shewanella_baltica_OS678 2
Shewanella_baltica_OS117 2
Shewanella_baltica_OS223 2
Shewanella_baltica_OS195 2
Shewanella_baltica_OS155 2
Shewanella_sp._MR-7 1
Shewanella_putrefaciens_200 2
Glaciecola_psychrophila_170 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1
Alteromonas_macleodii_str._'Ionian_Sea_U8' 1
Alteromonas_macleodii_str._'Ionian_Sea_U7' 1
Alteromonas_macleodii_str._'Ionian_Sea_U4' 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 1
Alteromonas_macleodii_str._'English_Channel_615' 1
Alteromonas_macleodii_AltDE1 1
Alteromonas_macleodii_str._'English_Channel_673' 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1
Alteromonas_macleodii_str._'Black_Sea_11' 1
Alteromonas_macleodii_ATCC_27126 1
Alcanivorax_dieselolei_B5 1
Thalassolituus_oleivorans_MIL-1 1
Stenotrophomonas_maltophilia_D457 1
Stenotrophomonas_maltophilia_JV3 1
Stenotrophomonas_maltophilia_R551-3 1
Xylella_fastidiosa_subsp._fastidiosa_GB514 1
Xylella_fastidiosa_M12 1
Xylella_fastidiosa_Temecula1 1
Xylella_fastidiosa_9a5c 1
Xanthomonas_citri_subsp._citri_Aw12879 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1
Xanthomonas_axonopodis_pv._citrumelo_F1 1
Xanthomonas_axonopodis_Xac29-1 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1
Xanthomonas_campestris_pv._raphani_756C 1
Xanthomonas_campestris_pv._campestris_str._8004 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1
Thioalkalivibrio_nitratireducens_DSM_14787 1
Legionella_pneumophila_str._Paris 1
Legionella_pneumophila_str._Lens 1
Legionella_pneumophila_subsp._pneumophila_LPE509 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 1
Legionella_pneumophila_subsp._pneumophila 1
Legionella_pneumophila_subsp._pneumophila 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1
Legionella_pneumophila_2300/99_Alcoy 1
Proteus_mirabilis_BB2000 1
Morganella_morganii_subsp._morganii_KT 2
Edwardsiella_tarda_C07-087 1
Edwardsiella_tarda_FL6-60 1
Rahnella_aquatilis_HX2 2
Yersinia_pseudotuberculosis_PB1/+ 3
Yersinia_pseudotuberculosis_YPIII 3
Yersinia_pseudotuberculosis_IP_32953 3
Yersinia_pestis_biovar_Microtus_str._91001 2
Yersinia_pestis_A1122 2
Yersinia_pestis_Z176003 2
Yersinia_pestis_D182038 2
Yersinia_pestis_D106004 2
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 2
Yersinia_pestis_Nepal516 2
Yersinia_pestis_Antiqua 2
Yersinia_pestis_Angola 2
Yersinia_pestis_CO92 2
Yersinia_pestis_KIM10+ 2
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 2
Yersinia_enterocolitica_subsp._palearctica_Y11 2
Serratia_sp._AS13 1
Serratia_plymuthica_S13 1
Serratia_plymuthica_4Rx13 1
Serratia_marcescens_FGI94 2
Serratia_marcescens_WW4 1
Serratia_liquefaciens_ATCC_27592 2
Dickeya_dadantii_Ech586 2
Dickeya_dadantii_3937 2
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 2
Pantoea_ananatis_LMG_5342 1
Pantoea_ananatis_PA13 1
Pantoea_ananatis_AJ13355 1
Erwinia_pyrifoliae_DSM_12163 1
Erwinia_amylovora_CFBP1430 1
Cronobacter_sakazakii_CMCC_45402 2
Cronobacter_sakazakii_SP291 2
Cronobacter_sakazakii_ATCC_BAA-894 2
Raoultella_ornithinolytica_B6 2
Shigella_sonnei_53G 1
Shigella_flexneri_2002017 1
Shigella_flexneri_2a_str._2457T 1
Shigella_flexneri_2a_str._301 1
Shigella_dysenteriae_1617 2
Shigella_boydii_Sb227 1
Salmonella_bongori_N268-08 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 1
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 1
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 1
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 1
Klebsiella_oxytoca_KCTC_1686 2
Klebsiella_pneumoniae_JM45 2
Klebsiella_pneumoniae_CG43 2
Klebsiella_pneumoniae_KCTC_2242 2
Klebsiella_pneumoniae_342 2
Klebsiella_pneumoniae_subsp._pneumoniae_1084 2
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 2
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 2
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 2
Enterobacter_aerogenes_EA1509E 2
Escherichia_coli_E24377A 1
Escherichia_coli_E._coli_PMV-1 1
Escherichia_coli_JJ1886 1
Escherichia_coli_LY180 1
Escherichia_coli_APEC_O78 1
Escherichia_coli_O7:K1_str._CE10 1
Escherichia_coli_O104:H4_str._2009EL-2050 1
Escherichia_coli_O104:H4_str._2009EL-2071 1
Escherichia_coli_O104:H4_str._2011C-3493 1
Escherichia_coli_NA114 1
Escherichia_coli_P12b 1
Escherichia_coli_str._'clone_D_i2' 1
Escherichia_coli_str._'clone_D_i14' 1
Escherichia_coli_UM146 1
Escherichia_coli_042 1
Escherichia_coli_Xuzhou21 1
Escherichia_coli_IHE3034 1
Escherichia_coli_UMNK88 1
Escherichia_coli_O83:H1_str._NRG_857C 1
Escherichia_coli_ABU_83972 1
Escherichia_coli_KO11FL 1
Escherichia_coli_KO11FL 1
Escherichia_coli_LF82 1
Escherichia_coli_ED1a 1
Escherichia_coli_IAI39 1
Escherichia_coli_UMN026 1
Escherichia_coli_55989 1
Escherichia_coli_S88 1
Escherichia_coli_IAI1 1
Escherichia_coli_W 1
Escherichia_coli_W 1
Escherichia_coli_DH1 1
Escherichia_coli_DH1 1
Escherichia_coli_ATCC_8739 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_SMS-3-5 1
Escherichia_coli_SE15 1
Escherichia_coli_SE11 1
Escherichia_coli_APEC_O1 1
Escherichia_coli_O103:H2_str._12009 1
Escherichia_coli_UTI89 1
Escherichia_coli_536 1
Escherichia_coli_HS 1
Escherichia_coli_ETEC_H10407 1
Escherichia_coli_O55:H7_str._RM12579 1
Escherichia_coli_O55:H7_str._CB9615 1
Escherichia_coli_O26:H11_str._11368 1
Escherichia_coli_CFT073 1
Escherichia_coli_O111:H-_str._11128 1
Escherichia_coli_O127:H6_str._E2348/69 1
Escherichia_coli_O157:H7_str._TW14359 1
Escherichia_coli_O157:H7_str._EC4115 1
Escherichia_coli_O157:H7_str._Sakai 1
Escherichia_coli_O157:H7_str._EDL933 1
Escherichia_coli_str._K-12_substr._MDS42 1
Escherichia_coli_BW2952 1
Escherichia_coli_str._K-12_substr._MG1655 1
Escherichia_coli_str._K-12_substr._W3110 1
Escherichia_coli_str._K-12_substr._DH10B 1
Escherichia_coli_B_str._REL606 1
Enterobacter_cloacae_SCF1 2
Enterobacter_cloacae_EcWSU1 2
Enterobacter_cloacae_subsp._cloacae_ENHKU01 2
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 2
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 2
Azotobacter_vinelandii_CA6 1
Azotobacter_vinelandii_CA 1
Pseudomonas_denitrificans_ATCC_13867 1
Pseudomonas_syringae_pv._phaseolicola_1448A 1
Pseudomonas_syringae_pv._syringae_B728a 1
Pseudomonas_stutzeri_CCUG_29243 1
Pseudomonas_stutzeri_DSM_10701 1
Pseudomonas_stutzeri_DSM_4166 1
Pseudomonas_stutzeri_RCH2 1
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 1
Pseudomonas_monteilii_SB3101 1
Pseudomonas_monteilii_SB3078 1
Pseudomonas_putida_H8234 1
Pseudomonas_putida_HB3267 1
Pseudomonas_putida_NBRC_14164 1
Pseudomonas_putida_DOT-T1E 1
Pseudomonas_putida_S16 1
Pseudomonas_putida_BIRD-1 1
Pseudomonas_putida_W619 1
Pseudomonas_putida_ND6 1
Pseudomonas_putida_KT2440 1
Pseudomonas_putida_GB-1 1
Pseudomonas_protegens_CHA0 1
Pseudomonas_poae_RE*1-1-14 1
Pseudomonas_fluorescens_F113 1
Pseudomonas_fluorescens_A506 1
Pseudomonas_fluorescens_R124 1
Pseudomonas_fluorescens_Pf0-1 1
Pseudomonas_resinovorans_NBRC_106553 1
Pseudomonas_mendocina_NK-01 1
Pseudomonas_aeruginosa_SCV20265 1
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1R 1
Pseudomonas_aeruginosa_PA1 1
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_NCGM2.S1 1
Pseudomonas_aeruginosa_M18 1
Pseudomonas_aeruginosa_LESB58 1
Pseudomonas_aeruginosa_PA7 1
Pseudomonas_aeruginosa_PAO1 1
Acinetobacter_genomosp._13TU__RUH2624 1
Acinetobacter_sp.__SH024 1
Acinetobacter_calcoaceticus_ruh2202 1
Acinetobacter_baumannii_ZW85-1 1
Acinetobacter_baumannii_TYTH-1 1
Acinetobacter_baumannii_BJAB0715 1
Acinetobacter_baumannii_BJAB07104 1
Acinetobacter_baumannii_TCDC-AB0715 1
Acinetobacter_baumannii_D1279779 1
Acinetobacter_baumannii_MDR-TJ 1
Acinetobacter_baumannii_1656-2 1
Acinetobacter_baumannii__ATCC_19606 1
Acinetobacter_baumannii_AB307-0294 1
Acinetobacter_baumannii_AYE 1
Acinetobacter_baumannii_SDF 1
Acinetobacter_baumannii_MDR-ZJ06 1
Acinetobacter_baumannii_AB0057 1
Acinetobacter_baumannii_ACICU 1
Acinetobacter_radioresistens__SH164 1
Acinetobacter_junii__SH205 1
Acinetobacter_johnsonii__SH046 1
Acinetobacter_lwoffii__SH145 1
Methylophaga_sp._JAM7 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   7
Pan_troglodytes_69_2.1.4   (Chimpanzee)   7
Gorilla_gorilla_69_3.1   (Western gorilla)   7
Pongo_abelii_69_2   (Sumatran orangutan)   5
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   7
Macaca_mulatta_69_1   (Rhesus monkey)   4
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   7
Otolemur_garnettii_69_3   (Small-eared galago)   8
Microcebus_murinus_69_1   (Gray mouse lemur)   6
Rattus_norvegicus_69_3.4   (Norway rat)   7
Mus_musculus_69_38   (House mouse)   5
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   6
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   8
Cavia_porcellus_69_3   (Domestic guinea pig)   11
Oryctolagus_cuniculus_69_2   (Rabbit)   9
Ochotona_princeps_69   (American pika)   5
Tupaia_belangeri_69   (Northern tree shrew)   3
Sus_scrofa_69_10.2   (Pig)   11
Bos_taurus_69_3.1   (Cattle)   6
Vicugna_pacos_69_1   (Alpaca)   6
Tursiops_truncatus_69_1   (Bottlenose dolphin)   6
Mustela_putorius_furo_69_1.0   (Domestic ferret)   6
Ailuropoda_melanoleuca_69_1   (Giant panda)   7
Canis_familiaris_69_3.1   (Dog)   5
Felis_catus_69   (Domestic cat)   6
Equus_caballus_69_2   (Horse)   8
Myotis_lucifugus_69_2.0   (Little brown bat)   10
Pteropus_vampyrus_69_1   (Large flying fox)   5
Sorex_araneus_69_1   (European shrew)   4
Erinaceus_europaeus_69   (Western European hedgehog)   4
Procavia_capensis_69_1   (Cape rock hyrax)   5
Loxodonta_africana_69_3   (African savanna elephant)   8
Echinops_telfairi_69   (Small Madagascar hedgehog)   6
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   4
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   4
Macropus_eugenii_69_1.0   (Tammar wallaby)   3
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   10
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   5
Ornithorhynchus_anatinus_69_5   (Platypus)   4
Petromyzon_marinus_69_7.0   (Sea lamprey)   4
Meleagris_gallopavo_69_2   (Turkey)   7
Gallus_gallus_69_2   (Chicken)   5
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   7
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   6
Anolis_carolinensis_69_2.0   (Green anole)   6
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   7
Latimeria_chalumnae_69_1   (Coelacanth)   2
Gadus_morhua_69_1   (Atlantic cod)   5
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   5
Takifugu_rubripes_69_4   (Torafugu)   3
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   5
Oryzias_latipes_69_1   (Japanese medaka)   4
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   2
Oreochromis_niloticus_69_1.0   (Nile tilapia)   4
Danio_rerio_69_9   (Zebrafish)   3
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   8
Ciona_intestinalis_69   (Vase tunicate)   7
Drosophila_melanogaster_69_5   (Fruit fly)   6
Caenorhabditis_elegans_69_215   (Roundworm)   3
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   0
Arabidopsis_thaliana_10   (Thale cress)   5

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   27
Homo_sapiens__(NCBI_version)   (Human)   8
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   5
Heliconius_numata__(Incomplete) 1
Loa_loa_v3.3_(Request)   (Eye worm)   2
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   5
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   3
Moniliophthora_perniciosa_FA553__(Genome_survey) 3
Lotus_japonicus__(Early_assembly) 6
Malus_x_domestica_(Duplicate)   (Apple)   33
Ricinus_communis__(Early_assembly)   (Castor bean)   8
Nicotiana_benthamiana_0.4.4_(Early_draft) 14
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   7
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   7
Phoenix_dactylifera__(Early_draft)   (Date palm)   11
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 0
NCBI_plasmid_sequences_(Plasmids) 28
UniProt__viral_sequences_(Viral) 0
Protozoadb_2010_08_(Protozoadb) 18
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 3
Protein_Data_Bank_(all_PDB_sequenc) 17
PDB_chains_(SCOP_1.75)_(PDB) 0
TargetDB__(Targets) 89
NCBI_viral_sequences_(Viral) 2
STRING_v9.0.5_(STRING) 956
Uniprot_2018_03_genome 48699
NCBI_2017_08_genome 55068

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