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Domain combinations for 51197,_gap_,52047 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51197 - Clavaminate synthase-like
52047 - RNI-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Papio_anubis_76   (Olive baboon)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sorex_araneus_76_1   (European shrew)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Saccoglossus_kowalevskii_v3.0 1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_76   (Vase tunicate)   1
Octopus_bimaculoides_280 1
Crassostrea_gigas_22   (Pacific oyster)   0
Capitella_sp._I_ 1
Nasonia_vitripennis_   (Jewel wasp)   1
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1
Lucilia_cuprina   (Australian sheep blowfly)   0
Drosophila_grimshawi_1.3 0
Drosophila_willistoni_1.3 0
Drosophila_suzukii 1
Drosophila_sechellia_1.3 0
Drosophila_erecta_1.3 0
Drosophila_virilis_1.2 0
Drosophila_mojavensis_1.3 0
Tribolium_castaneum_3.0   (Red flour beetle)   1
Daphnia_pulex_   (Common water flea)   1
Strigamia_maritima_22 1
Sarcoptes_scabiei 1
Aureococcus_anophagefferens_ 0

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Longest transcript per gene
Genome     Number
Tupaia_belangeri_69   (Northern tree shrew)   0
Felis_catus_69   (Domestic cat)   1
Sorex_araneus_69_1   (European shrew)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_69   (Vase tunicate)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 8
Uniprot_2018_03_genome 294
NCBI_2017_08_genome 75

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