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  Home > SCOP hierarchy > Domain combination - 51445,49384

Domain combinations for 51445,49384 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51445 - (Trans)glycosidases
49384 - Carbohydrate-binding domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Meloidogyne_incognita_   (Southern root-knot nematode)   11
Meloidogyne_hapla_ 2
Dictyostelium_discoideum 1
Dictyostelium_purpureum_ 1
Synechococcus_sp._PCC_6312 0
Microcoleus_sp._PCC_7113 1
Gloeocapsa_sp._PCC_7428 0
Rivularia_sp._PCC_7116 0
Calothrix_sp._PCC_7507 1
Conexibacter_woesei_DSM_14684 1
Acidimicrobium_ferrooxidans_DSM_10331 0
Thermobispora_bispora_DSM_43833 2
Acidothermus_cellulolyticus_11B 1
Catenulispora_acidiphila_DSM_44928 1
Thermobifida_fusca_YX 3
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1
Kitasatospora_setae_KM-6054 1
Streptomyces_coelicolor_A3(2) 1
Streptomyces_sp._PAMC26508 1
Streptomyces_flavogriseus_ATCC_33331 1
Streptomyces_sp._SirexAA-E 1
Streptomyces_bingchenggensis_BCW-1 1
Streptomyces_violaceusniger_Tu_4113 1
Streptomyces_avermitilis_MA-4680 1
Streptomyces_scabiei_87.22 2
Actinosynnema_mirum_DSM_43827 5
Saccharomonospora_viridis_DSM_43017 1
Amycolatopsis_mediterranei_U32 3
Verrucosispora_maris_AB-18-032 3
Micromonospora_sp._L5 4
Micromonospora_aurantiaca_ATCC_27029 4
Actinoplanes_sp._N902-109 7
Actinoplanes_sp._SE50/110 3
Actinoplanes_missouriensis_431 4
Leifsonia_xyli_subsp._xyli_str._CTCB07 1
Microbacterium_testaceum_StLB037 1
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1
Jonesia_denitrificans_DSM_20603 4
Xylanimonas_cellulosilytica_DSM_15894 2
Cellulomonas_flavigena_DSM_20109 4
Cellulomonas_fimi_ATCC_484 2
[Cellvibrio]_gilvus_ATCC_13127 4
Acetobacterium_woodii_DSM_1030 0
Clostridium_phytofermentans_ISDg 0
Clostridium_lentocellum_DSM_5427 2
Butyrivibrio_proteoclasticus_B316 1
Butyrivibrio_fibrisolvens 2
Clostridium_cellulovorans_743B 1
Caldicellulosiruptor_obsidiansis_OB47 0
Caldicellulosiruptor_kronotskyensis_2002 0
Caldicellulosiruptor_saccharolyticus_DSM_8903 0
Caldicellulosiruptor_bescii_DSM_6725 0
Paenibacillus_terrae_HPL-003 1
Paenibacillus_mucilaginosus_3016 0
Paenibacillus_polymyxa_M1 1
Bacillus_sp._JS 1
Bacillus_amyloliquefaciens_FZB42 1
Bacillus_subtilis_subsp._subtilis_str._168 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1
Acidovorax_citrulli_AAC00-1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1
Teredinibacter_turnerae_T7901 0
Hahella_chejuensis_KCTC_2396 1
Xanthomonas_axonopodis_pv._citri_str._306 1
Xanthomonas_albilineans_GPE_PC73 2
Xanthomonas_oryzae_pv._oryzae_PXO99A 1
Xanthomonas_campestris_pv._campestris_str._B100 1
Pectobacterium_wasabiae_WPP163 1
Pectobacterium_sp._SCC3193 1
Pectobacterium_atrosepticum_SCRI1043 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 1

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Strains
Genome     Number
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1
Cyanobacterium_aponinum_PCC_10605 0
Calothrix_parietina_Calothrix_sp._PCC_6303 1
Adlercreutzia_equolifaciens_DSM_19450 1
Streptomyces_rapamycinicus_NRRL_5491 2
Streptomyces_davawensis_JCM_4913 2
Streptomyces_venezuelae_ATCC_10712 1
Amycolatopsis_mediterranei_RB 3
Amycolatopsis_mediterranei_S699 3
Amycolatopsis_mediterranei_S699 3
Actinoplanes_friuliensis_DSM_7358 5
Clavibacter_michiganensis_subsp._sepedonicus 0
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1
Bifidobacterium_thermophilum_RBL67 0
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Paenibacillus_polymyxa_CR1 1
Paenibacillus_polymyxa_SC2 1
Paenibacillus_polymyxa_E681 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1
Bacillus_amyloliquefaciens_LFB112 1
Bacillus_amyloliquefaciens_CC178 1
Bacillus_amyloliquefaciens_Y2 1
Bacillus_amyloliquefaciens_IT-45 1
Bacillus_licheniformis_9945A 1
Bacillus_subtilis_PY79 1
Bacillus_subtilis_XF-1 1
Bacillus_subtilis_QB928 1
Bacillus_subtilis_BSn5 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1
Bacillus_subtilis_subsp._spizizenii_str._W23 1
Bacillus_subtilis_subsp._natto_BEST195 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1
Xanthomonas_citri_subsp._citri_Aw12879 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1
Xanthomonas_axonopodis_pv._citrumelo_F1 1
Xanthomonas_axonopodis_Xac29-1 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1
Xanthomonas_campestris_pv._raphani_756C 1
Xanthomonas_campestris_pv._campestris_str._8004 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1

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Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 0
STRING_v9.0.5_(STRING) 38
Uniprot_2018_03_genome 4191
TargetDB__(Targets) 1
NCBI_2017_08_genome 2560

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.