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Home > SCOP hierarchy > Domain combination - 51905,54373,_gap_,103025,101790

Domain combinations for 51905,54373,_gap_,103025,101790 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51905 - FAD/NAD(P)-binding domain
54373 - FAD-linked reductases, C-terminal domain
103025 - Folate-binding domain
101790 - Aminomethyltransferase beta-barrel domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 5

Pan_troglodytes_76_2.1.4 (Chimpanzee) 2

Gorilla_gorilla_76_3.1 (Western gorilla) 2

Pongo_abelii_76_2 (Sumatran orangutan) 2

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 2

Papio_anubis_76 (Olive baboon) 2

Macaca_mulatta_76_1 (Rhesus monkey) 1

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 5

Otolemur_garnettii_76_3 (Small-eared galago) 2

Microcebus_murinus_76_1 (Gray mouse lemur) 1

Rattus_norvegicus_76_5.0 (Norway rat) 2

Mus_musculus_76_38 (House mouse) 2

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 3

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 2

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 2

Cavia_porcellus_76_3 (Domestic guinea pig) 2

Oryctolagus_cuniculus_76_2 (Rabbit) 1

Ochotona_princeps_76 (American pika) 1

Tupaia_belangeri_76 (Northern tree shrew) 1

Sus_scrofa_76_10.2 (Pig) 1

Bos_taurus_76_3.1 (Cattle) 2

Ovis_aries_76_3.1 (Sheep) 2

Vicugna_pacos_76_1 (Alpaca) 1

Tursiops_truncatus_76_1 (Bottlenose dolphin) 0

Mustela_putorius_furo_76_1.0 (Domestic ferret) 2

Ailuropoda_melanoleuca_76_1 (Giant panda) 2

Canis_familiaris_76_3.1 (Dog) 2

Felis_catus_76_6.2 (Domestic cat) 1

Equus_caballus_76_2 (Horse) 3

Myotis_lucifugus_76_2.0 (Little brown bat) 2

Pteropus_vampyrus_76_1 (Large flying fox) 1

Sorex_araneus_76_1 (European shrew) 1

Erinaceus_europaeus_76 (Western European hedgehog) 1

Procavia_capensis_76_1 (Cape rock hyrax) 0

Loxodonta_africana_76_3 (African savanna elephant) 2

Echinops_telfairi_76 (Small Madagascar hedgehog) 1

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 1

Macropus_eugenii_76_1.0 (Tammar wallaby) 1

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 0

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 1

Ornithorhynchus_anatinus_76_5 (Platypus) 2

Saccoglossus_kowalevskii_v3.0 1

Petromyzon_marinus_76_7.0 (Sea lamprey) 2

Meleagris_gallopavo_76_2 (Turkey) 1

Gallus_gallus_76_4 (Chicken) 1

Anas_platyrhynchos_76_1.0 (Mallard) 2

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 2

Ficedula_albicollis_76_1.0 (Collared flycatcher) 3

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 3

Anolis_carolinensis_76_2.0 (Green anole) 2

Xenopus_laevis_ (African clawed frog) 1

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 2

Latimeria_chalumnae_76_1 (Coelacanth) 1

Lepisosteus_oculatus_76 (Spotted gar) 1

Gadus_morhua_76_1 (Atlantic cod) 2

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 2

Takifugu_rubripes_76_4 (Torafugu) 5

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 1

Oryzias_latipes_76_1 (Japanese medaka) 1

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 1

Poecilia_formosa_76 (Amazon molly) 0

Oreochromis_niloticus_76_1.0 (Nile tilapia) 0

Astyanax_mexicanus_76 (Mexican tetra) 0

Danio_rerio_76_9 (Zebrafish) 1

Ciona_savignyi_76_2.0 (Pacific transparent sea squirt) 3

Ciona_intestinalis_76 (Vase tunicate) 2

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 2

Adineta_vaga 0

Octopus_bimaculoides_280 0

Crassostrea_gigas_22 (Pacific oyster) 0

Lottia_gigantea_ (Owl limpet) 2

Capitella_sp._I_ 2

Danaus_plexippus_OGS1.0 (Monarch butterfly) 0

Heliconius_melpomene_ (Postman butterfly) 0

Nasonia_vitripennis_ (Jewel wasp) 0

Harpegnathos_saltator_v3.3 (Jerdon's jumping ant) 2

Linepithema_humile_v1.1 (Argentine ant) 2

Pogonomyrmex_barbatus_v1.2 (Red harvester ant) 2

Solenopsis_invicta_v.2.2.3 (Red fire ant) 2

Acromyrmex_echinatior_v3.8 (Panamanian leafcutter ant) 2

Atta_cephalotes_v1.1 1

Camponotus_floridanus_v3.3 (Florida carpenter ant) 2

Lucilia_cuprina (Australian sheep blowfly) 1

Drosophila_grimshawi_1.3 1

Drosophila_willistoni_1.3 0

Drosophila_pseudoobscura_2.13 1

Drosophila_persimilis_1.3 1

Drosophila_suzukii 1

Drosophila_yakuba_1.3 1

Drosophila_simulans_1.3 1

Drosophila_sechellia_1.3 1

Drosophila_melanogaster_76_5 (Fruit fly) 1

Drosophila_erecta_1.3 1

Drosophila_ananassae_1.3 1

Drosophila_virilis_1.2 1

Drosophila_mojavensis_1.3 1

Aedes_aegypti_55_(Not_maintained) (Yellow fever mosquito) 2

Culex_pipiens_quinquefasciatus_ (Southern house mosquito) 1

Anopheles_darlingi_22 (American malaria mosquito) 1

Anopheles_gambiae_49_3j (African malaria mosquito) 1

Tribolium_castaneum_3.0 (Red flour beetle) 2

Pediculus_humanus_corporis__(Early_assembly) (Human body louse) 1

Acyrthosiphon_pisum_ (Pea aphid) 0

Rhodnius_prolixus_22 1

Daphnia_pulex_ (Common water flea) 1

Strigamia_maritima_22 2

Ixodes_scapularis__(Preliminary) (Black-legged tick) 2

Onchocerca_volvulus_22 1

Brugia_malayi_WS250 (Agent of lymphatic filariasis) 2

Caenorhabditis_japonica_ 1

Caenorhabditis_brenneri_ 2

Caenorhabditis_remanei_ 1

Caenorhabditis_elegans_76_235 (Roundworm) 2

Caenorhabditis_briggsae_2 1

Mnemiopsis_leidyi (Sea walnut) 2

Nematostella_vectensis_1.0 (Starlet sea anemone) 2

Hydra_vulgaris 2

Amphimedon_queenslandica 1

Trichoplax_adhaerens_ 0

Capsaspora_owczarzaki_ATCC_30864_ 1

Magnaporthe_grisea_70-15_ 1

Glomerella_graminicola_22 1

Fusarium_graminearum_ 1

Nectria_haematococca_mpVI_ 1

Fusarium_oxysporum_f._sp._lycopersici_4286_ 1

Didymella_exigua_CBS_183.55_v1.0 1

Leptosphaeria_maculans_22 1

Setosphaeria_turcica_v1.0 1

Cochliobolus_miyabeanus_ATCC_44560_v1.0 1

Cochliobolus_victoriae_FI3_v1.0 1

Cochliobolus_carbonum_26-R-13_v1.0 1

Cochliobolus_heterostrophus_ (Southern corn leaf blight pathogen) 1

Alternaria_brassicicola_ 0

Cochliobolus_lunatus_m118_v2.0 0

Pyrenophora_teres_f._teres_22 1

Pyrenophora_tritici-repentis_ 1

Stagonospora_nodorum_ 1

Mycosphaerella_graminicola_IPO323_ 1

Zasmidium_cellare_ATCC_36951_v1.0 1

Dothistroma_septosporum 0

Septoria_musiva_v1.0 1

Mycosphaerella_fijiensis_CIRAD86_ 1

Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1

Penicillium_chrysogenum_Wisconsin_54-1255_ 1

Penicillium_chrysogenum_v1.0 1

Aspergillus_acidus_v1.0 1

Aspergillus_fumigatus_Af293 1

Aspergillus_brasiliensis_v1.0 1

Aspergillus_nidulans_FGSC_A4_ 1

Aspergillus_sydowii_v1.0 1

Aspergillus_versicolor_v1.0 1

Aspergillus_glaucus 1

Aspergillus_carbonarius_ITEM_5010_ 1

Neosartorya_fischeri_NRRL_181_ 1

Aspergillus_terreus_NIH2624_ 1

Aspergillus_tubingensis_v1.0 1

Aspergillus_wentii_v1.0 1

Aspergillus_oryzae_RIB40_ 1

Aspergillus_niger_22 1

Aspergillus_flavus_NRRL3357_ 1

Thecamonas_trahens_ATCC_50062_ 1

Bigelowiella_natans_CCMP2755_22 0

Aureococcus_anophagefferens_ 3

Phaeodactylum_tricornutumCCAP_1055/1 0

Thalassiosira_pseudonana_CCMP1335 0

Perkinsus_marinus_ATCC_50983_ 1

Symbiodinium_minutum_clade_B1_v1.2 0

Guillardia_theta_CCMP2712_v1.0_ 1

Emiliania_huxleyi_CCMP1516_ 3

Rubrobacter_xylanophilus_DSM_9941 1

Modestobacter_marinus 1

Blastococcus_saxobsidens_DD2 1

Geodermatophilus_obscurus_DSM_43160 1

Stackebrandtia_nassauensis_DSM_44728 1

Streptosporangium_roseum_DSM_43021 2

Streptomyces_bingchenggensis_BCW-1 1

Streptomyces_violaceusniger_Tu_4113 1

Streptomyces_avermitilis_MA-4680 1

Streptomyces_scabiei_87.22 1

Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1

Saccharomonospora_viridis_DSM_43017 1

Saccharopolyspora_erythraea_NRRL_2338 3

Amycolatopsis_mediterranei_U32 1

Nocardioides_sp._JS614 3

Microlunatus_phosphovorus_NM-1 1

Actinoplanes_sp._N902-109 1

Actinoplanes_missouriensis_431 1

Segniliparus_rotundus_DSM_44985 1

Gordonia_sp._KTR9 1

Gordonia_polyisoprenivorans_VH2 1

Rhodococcus_jostii_RHA1 1

Rhodococcus_opacus_B4 1

Amycolicicoccus_subflavus_DQS3-9A1 2

Mycobacterium_sp._JLS 1

Mycobacterium_vanbaalenii_PYR-1 1

Mycobacterium_rhodesiae_NBB3 1

Mycobacterium_gilvum_PYR-GCK 1

Mycobacterium_chubuense_NBB4 2

Mycobacterium_marinum_M 1

Corynebacterium_variabile_DSM_44702 1

Intrasporangium_calvum_DSM_43043 1

Brachybacterium_faecium_DSM_4810 1

Arthrobacter_phenanthrenivorans_Sphe3 1

Arthrobacter_chlorophenolicus_A6 2

Arthrobacter_aurescens_TC1 1

Arthrobacter_sp._Rue61a 1

Arthrobacter_sp._FB24 1

Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1

Bacillus_megaterium_DSM_319 1

Pirellula_staleyi_DSM_6068 1

Azoarcus_sp._KH32C 1

Burkholderia_phytofirmans_PsJN 1

Burkholderia_phymatum_STM815 1

Burkholderia_xenovorans_LB400 1

Cupriavidus_taiwanensis_LMG_19424 1

Cupriavidus_necator_N-1 1

Ralstonia_eutropha_H16 1

Burkholderia_sp._CCGE1002 1

Burkholderia_gladioli_BSR3 1

Burkholderia_glumae_BGR1 1

Sphingomonas_wittichii_RW1 1

Dinoroseobacter_shibae_DFL_12 2

Phaeobacter_gallaeciensis_2.10 7

Pseudovibrio_sp._FO-BEG1 4

Jannaschia_sp._CCS1 6

Ruegeria_sp._TM1040 5

Ruegeria_pomeroyi_DSS-3 12

Roseobacter_litoralis_Och_149 7

Roseobacter_denitrificans_OCh_114 7

Rhodobacter_sphaeroides_ATCC_17029 1

Rhodobacter_capsulatus_SB_1003 2

Paracoccus_denitrificans_PD1222 2

Polymorphum_gilvum_SL003B-26A1 1

Candidatus_Puniceispirillum_marinum_IMCC1322 6

alpha_proteobacterium_HIMB5 3

alpha_proteobacterium_HIMB59 2

Methylobacterium_sp._4-46 0

Ochrobactrum_anthropi_ATCC_49188 1

Brucella_microti_CCM_4915 1

Brucella_pinnipedialis_B2/94 1

Brucella_suis_ATCC_23445 1

Sinorhizobium_fredii_NGR234 5

Sinorhizobium_medicae_WSM419 5

Sinorhizobium_meliloti_AK83 5

Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1

Rhizobium_etli_CIAT_652 2

Rhizobium_leguminosarum_bv._viciae_3841 2

Agrobacterium_tumefaciens_str._C58 1

Agrobacterium_radiobacter_K84 4

Agrobacterium_sp._H13-3 1

Agrobacterium_vitis_S4 1

Mesorhizobium_opportunistum_WSM2075 9

Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 10

Mesorhizobium_loti_MAFF303099 6

Hyphomicrobium_sp._MC1 1

Methylocystis_sp._SC2 1

Halopiger_xanaduensis_SH-6 1

Haloterrigena_turkmenica_DSM_5511 2

Haloquadratum_walsbyi_DSM_16790 2

Haloferax_volcanii_DS2 1

Haloarcula_hispanica_ATCC_33960 3

Haloarcula_marismortui_ATCC_43049 2

Halalkalicoccus_jeotgali_B3 1

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Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 1

Drosophila_melanogaster_FlyBase_5.12_(FlyBase) (Fruit fly) 1

Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase) (African malaria mosquito) 1

Ascaris_suum_Victoria/Ghent_ (Pig roundworm) 2

Caenorhabditis_elegans_WormBase_WS218__(WormBase) (Roundworm) 2

Aspergillus_fumigatus_A1163_ 1

Frankia_sp._EuI1c 1

Streptomyces_rapamycinicus_NRRL_5491 1

Streptomyces_davawensis_JCM_4913 1

Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1

Amycolatopsis_mediterranei_RB 1

Amycolatopsis_mediterranei_S699 1

Amycolatopsis_mediterranei_S699 1

Amycolatopsis_orientalis_HCCB10007 1

Actinoplanes_friuliensis_DSM_7358 1

Nocardia_brasiliensis_ATCC_700358 1

Mycobacterium_liflandii_128FXT 1

Mycobacterium_sp._KMS 1

Mycobacterium_sp._MCS 1

Mycobacterium_gilvum_Spyr1 1

Corynebacterium_terpenotabidum_Y-11 1

Bacillus_megaterium_WSH-002 1

Bacillus_megaterium_QM_B1551 1

Burkholderia_phenoliruptrix_BR3459a 1

Pandoraea_pnomenusa_3kgm 1

Burkholderia_sp._YI23 1

Burkholderia_sp._CCGE1001 1

Phaeobacter_gallaeciensis_DSM_17395 8

Phaeobacter_gallaeciensis_DSM_26640 4

Leisingera_methylohalidivorans_DSM_14336 10

Octadecabacter_antarcticus_307 7

Octadecabacter_arcticus_238 6

Rhodobacter_sphaeroides_KD131 1

Rhodobacter_sphaeroides_ATCC_17025 1

Rhodobacter_sphaeroides_2.4.1 1

Paracoccus_aminophilus_JCM_7686 3

Candidatus_Pelagibacter_ubique_HTCC1062 2

Brucella_melitensis_bv._1_str._16M 1

Brucella_abortus_A13334 1

Sinorhizobium_fredii_USDA_257 4

Sinorhizobium_fredii_HH103 3

Sinorhizobium_meliloti_2011 4

Sinorhizobium_meliloti_GR4 5

Sinorhizobium_meliloti_Rm41 5

Sinorhizobium_meliloti_SM11 5

Sinorhizobium_meliloti_BL225C 5

Sinorhizobium_meliloti_1021 5

Rhizobium_etli_CFN_42 2

Rhizobium_etli_bv._mimosae_str._Mim1 2

Rhizobium_tropici_CIAT_899 3

Rhizobium_leguminosarum_bv._trifolii_WSM2304 4

Rhizobium_leguminosarum_bv._trifolii_WSM1325 2

Mesorhizobium_australicum_WSM2073 7

Spiribacter_salinus_M19-40 1

Natronococcus_occultus_SP4 4

Natronobacterium_gregoryi_SP2 1

Haloquadratum_walsbyi_C23 2

Haloarcula_hispanica_N601 3

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Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 2

Pan_troglodytes_69_2.1.4 (Chimpanzee) 2

Gorilla_gorilla_69_3.1 (Western gorilla) 2

Pongo_abelii_69_2 (Sumatran orangutan) 2

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 2

Macaca_mulatta_69_1 (Rhesus monkey) 1

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 2

Otolemur_garnettii_69_3 (Small-eared galago) 2

Microcebus_murinus_69_1 (Gray mouse lemur) 1

Rattus_norvegicus_69_3.4 (Norway rat) 2

Mus_musculus_69_38 (House mouse) 2

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 3

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 2

Cavia_porcellus_69_3 (Domestic guinea pig) 2

Oryctolagus_cuniculus_69_2 (Rabbit) 2

Ochotona_princeps_69 (American pika) 1

Tupaia_belangeri_69 (Northern tree shrew) 1

Sus_scrofa_69_10.2 (Pig) 1

Bos_taurus_69_3.1 (Cattle) 2

Vicugna_pacos_69_1 (Alpaca) 1

Tursiops_truncatus_69_1 (Bottlenose dolphin) 0

Mustela_putorius_furo_69_1.0 (Domestic ferret) 2

Ailuropoda_melanoleuca_69_1 (Giant panda) 2

Canis_familiaris_69_3.1 (Dog) 1

Felis_catus_69 (Domestic cat) 1

Equus_caballus_69_2 (Horse) 2

Myotis_lucifugus_69_2.0 (Little brown bat) 2

Pteropus_vampyrus_69_1 (Large flying fox) 1

Sorex_araneus_69_1 (European shrew) 1

Erinaceus_europaeus_69 (Western European hedgehog) 1

Procavia_capensis_69_1 (Cape rock hyrax) 0

Loxodonta_africana_69_3 (African savanna elephant) 2

Echinops_telfairi_69 (Small Madagascar hedgehog) 1

Macropus_eugenii_69_1.0 (Tammar wallaby) 1

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 0

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 1

Ornithorhynchus_anatinus_69_5 (Platypus) 2

Petromyzon_marinus_69_7.0 (Sea lamprey) 2

Meleagris_gallopavo_69_2 (Turkey) 1

Gallus_gallus_69_2 (Chicken) 2

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 2

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 2

Anolis_carolinensis_69_2.0 (Green anole) 2

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 2

Latimeria_chalumnae_69_1 (Coelacanth) 1

Gadus_morhua_69_1 (Atlantic cod) 2

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 1

Takifugu_rubripes_69_4 (Torafugu) 1

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 1

Oryzias_latipes_69_1 (Japanese medaka) 0

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 0

Danio_rerio_69_9 (Zebrafish) 1

Ciona_savignyi_69_2.0 (Pacific transparent sea squirt) 1

Ciona_intestinalis_69 (Vase tunicate) 2

Drosophila_melanogaster_69_5 (Fruit fly) 1

Caenorhabditis_elegans_69_215 (Roundworm) 1

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 5

Homo_sapiens__(NCBI_version) (Human) 2

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 2

Loa_loa_v3.3_(Request) (Eye worm) 2

Brugia_malayi_v1.0_(Duplicate) (Agent of lymphatic filariasis) 0

NCBI_plasmid_sequences_(Plasmids) 47

STRING_v9.0.5_(STRING) 199

Uniprot_2018_03_genome 93990

NCBI_2017_08_genome 7661

TargetDB__(Targets) 5

Protein_Data_Bank_(all_PDB_sequenc) 12

PDB_chains_(SCOP_1.75)_(PDB) 1

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Domain combinations for 51905,54373,_gap_,103025,101790 superfamilies in groups of genomes