SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 51905,54373,_gap_,52833 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51905 - FAD/NAD(P)-binding domain
54373 - FAD-linked reductases, C-terminal domain
52833 - Thioredoxin-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Adineta_vaga 1
Conidiobolus_coronatus_NRRL28638_v1.0 2
Mortierella_verticillata_NRRL_6337_ 1
Phycomyces_blakesleeanus_ 1
Rhizopus_oryzae_RA_99-880_ 1
Mucor_circinelloides_ 1
Rhizomucor_miehei_CAU432_ 1
Malassezia_globosa_CBS_7966_ 6
Sporisorium_reilianum_22 0
Ustilago_maydis_ 1
Mixia_osmundae_IAM_14324_v1.0 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1
Melampsora_laricis-populina_ 1
Rhodotorula_graminis_WP1_v1.0 1
Sporobolomyces_roseus_IAM_13481_ 1
Microbotryum_violaceum_22 2
Wallemia_sebi_v1.0 1
Sphaerobolus_stellatus_v1.0 5
Piloderma_croceum_F_1598_v1.0 3
Serpula_lacrymans_var._lacrymans_S7.9_ 6
Coniophora_puteana 4
Hydnomerulius_pinastri_v2.0 2
Paxillus_rubicundulus_Ve08.2h10_v1.0 6
Pisolithus_microcarpus_441_v1.0 4
Pisolithus_tinctorius_Marx_270_v1.0 4
Scleroderma_citrinum_Foug_A_v1.0 8
Coprinopsis_cinerea_okayama7_130_v3 2
Pleurotus_ostreatus_   (Oyster mushroom)   4
Amanita_thiersii_Skay4041_v1.0 1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   3
Galerina_marginata_v1.0 2
Hebeloma_cylindrosporum_h7_v2.0 1
Laccaria_bicolor_S238N-H82_ 1
Agaricus_bisporus_var._bisporus_ 1
Schizophyllum_commune_ 5
Stereum_hirsutum_FP-91666_SS1__v1.0 6
Heterobasidion_annosum_ 3
Gloeophyllum_trabeumv1.0 5
Punctularia_strigosozonata_v1.0 1
Fomitiporia_mediterranea_v1.0 2
Tulasnella_calospora_AL13/4D_v1.0 1
Postia_placenta_ 4
Wolfiporia_cocos_MD-104_SS10__v1.0 6
Fomitopsis_pinicolav1.0 5
Fomitopsis_pinicola_FP-58527_SS1_v3.0 5
Phanerochaete_chrysosporium_RP-78_2.1 3
Dichomitus_squalens 3
Trametes_versicolor_v1.0 5
Daldinia_eschscholzii_EC12_v1.0 5
Apiospora_montagnei_NRRL_25634_v1.0 3
Magnaporthe_poae_ATCC_64411_22 2
Magnaporthe_grisea_70-15_ 3
Podospora_anserina_ 3
Sporotrichum_thermophile_ATCC_42464_ 3
Thielavia_terrestris_NRRL_8126_ 1
Chaetomium_globosum_CBS_148.51_ 3
Neurospora_tetrasperma_ 4
Neurospora_discreta_FGSC_8579_ 4
Neurospora_crassa_OR74A_ 4
Cryphonectria_parasitica_   (Chestnut blight fungus)   4
Verticillium_albo-atrum_VaMs.102_ 2
Verticillium_dahliae_VdLs.17_ 2
Acremonium_alcalophilumv_1.0 1
Glomerella_graminicola_22 4
Fusarium_graminearum_ 6
Nectria_haematococca_mpVI_ 9
Fusarium_oxysporum_f._sp._lycopersici_4286_ 3
Fusarium_verticillioides_7600_ 6
Trichoderma_asperellum_CBS_433.97_v1.0 3
Trichoderma_atroviride_ 3
Trichoderma_citrinoviride_v1.0 3
Trichoderma_reesei_1.2 3
Trichoderma_virens_Gv29-8_ 5
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3
Trichoderma_harzianum_CBS_226.95_v1.0 8
Amorphotheca_resinae_v1.0   (Creosote fungus)   7
Botrytis_cinerea_B05.10_ 3
Sclerotinia_sclerotiorum_ 0
Didymella_exigua_CBS_183.55_v1.0 3
Leptosphaeria_maculans_22 1
Setosphaeria_turcica_v1.0 4
Cochliobolus_miyabeanus_ATCC_44560_v1.0 3
Cochliobolus_victoriae_FI3_v1.0 3
Cochliobolus_carbonum_26-R-13_v1.0 4
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   4
Alternaria_brassicicola_ 3
Cochliobolus_lunatus_m118_v2.0 3
Pyrenophora_teres_f._teres_22 4
Pyrenophora_tritici-repentis_ 5
Stagonospora_nodorum_ 4
Mycosphaerella_graminicola_IPO323_ 3
Zasmidium_cellare_ATCC_36951_v1.0 9
Dothistroma_septosporum 3
Septoria_musiva_v1.0 3
Mycosphaerella_fijiensis_CIRAD86_ 3
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 5
Paracoccidioides_brasiliensis_Pb18_ 1
Coccidioides_posadasii_RMSCC_3488_ 2
Coccidioides_immitis_RS_ 2
Ajellomyces_dermatitidis_SLH14081_ 3
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1
Microsporum_canis_CBS_113480_ 2
Trichophyton_equinum_CBS_127.97_ 2
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_tonsurans_CBS_112818_ 2
Trichophyton_rubrum_CBS_118892_ 2
Uncinocarpus_reesii_1704_ 3
Aspergillus_zonatus_v1.0 3
Penicillium_chrysogenum_Wisconsin_54-1255_ 6
Penicillium_chrysogenum_v1.0 7
Aspergillus_acidus_v1.0 9
Aspergillus_fumigatus_Af293 7
Aspergillus_brasiliensis_v1.0 7
Aspergillus_nidulans_FGSC_A4_ 7
Aspergillus_sydowii_v1.0 4
Aspergillus_versicolor_v1.0 6
Aspergillus_glaucus 6
Aspergillus_carbonarius_ITEM_5010_ 8
Neosartorya_fischeri_NRRL_181_ 10
Aspergillus_terreus_NIH2624_ 7
Aspergillus_tubingensis_v1.0 10
Aspergillus_wentii_v1.0 5
Aspergillus_oryzae_RIB40_ 10
Aspergillus_niger_22 10
Aspergillus_niger_ATCC_1015_ 8
Aspergillus_flavus_NRRL3357_ 8
Aspergillus_clavatus_NRRL_1_ 6
Penicillium_marneffei_ATCC_18224_ 9
Tuber_melanosporum_Mel28_22 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1
Candida_dubliniensis_CD36_ 0
Candida_tropicalis_MYA-3404_ 0
Candida_parapsilosis_ 0
Candida_albicans_SC5314 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 0
Babjeviella_inositovora_NRRL_Y-12698_v1.0 0
Pichia_stipitis_CBS_6054_ 0
Debaromyces_hansenii 0
Wickerhamomyces_anomalus 2
Rubrobacter_xylanophilus_DSM_9941 0
Modestobacter_marinus 2
Blastococcus_saxobsidens_DD2 1
Gordonia_polyisoprenivorans_VH2 1
Nocardia_farcinica_IFM_10152 1
Corynebacterium_aurimucosum_ATCC_700975 1
Corynebacterium_glutamicum_R 1
Microbacterium_testaceum_StLB037 1
Isoptericola_variabilis_225 1
Cellulomonas_fimi_ATCC_484 1
Arthrobacter_phenanthrenivorans_Sphe3 1
Arthrobacter_chlorophenolicus_A6 1
Arthrobacter_aurescens_TC1 2
Arthrobacter_arilaitensis_Re117 2
Kocuria_rhizophila_DC2201 1
Arthrobacter_sp._Rue61a 1
Arthrobacter_sp._FB24 1
Micrococcus_luteus_NCTC_2665 1
Burkholderia_phymatum_STM815 1
Burkholderia_sp._RPE64 1
Burkholderia_sp._CCGE1002 1
Comamonas_testosteroni_CNB-2 1
Paracoccus_denitrificans_PD1222 1
Polymorphum_gilvum_SL003B-26A1 1
Candidatus_Puniceispirillum_marinum_IMCC1322 1
Methylobacterium_sp._4-46 1
Methylobacterium_nodulans_ORS_2060 3
Agrobacterium_radiobacter_K84 1
Pelagibacterium_halotolerans_B2 1
Bradyrhizobium_japonicum_USDA_110 1
Bradyrhizobium_sp._ORS_278 1
Marinomonas_sp._MWYL1 1
Serratia_sp._ATCC_39006 1

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Strains
Genome     Number
Paracoccidioides_brasiliensis_Pb01_ 1
Paracoccidioides_brasiliensis_Pb03_ 1
Coccidioides_posadasii_str._Silveira_ 2
Coccidioides_immitis_RMSCC_3703_ 1
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 2
Ajellomyces_dermatitidis_ER-3_ 3
Histoplasma_capsulatum_H143 1
Histoplasma_capsulatum_H88 1
Histoplasma_capsulatum_G186AR 2
Aspergillus_fumigatus_A1163_ 6
Candida_albicans_WO-1_ 0
Nocardia_brasiliensis_ATCC_700358 1
Corynebacterium_maris_DSM_45190 1
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1
Corynebacterium_argentoratense_DSM_44202 1
Corynebacterium_glutamicum_MB001 1
Corynebacterium_glutamicum_SCgG2 1
Corynebacterium_glutamicum_SCgG1 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_glutamicum_ATCC_13032 1
Burkholderia_sp._YI23 1
Bradyrhizobium_sp._S23321 1
Bradyrhizobium_sp._BTAi1 1
Bradyrhizobium_oligotrophicum_S58 1
Bradyrhizobium_japonicum_USDA_6 1
Alcanivorax_dieselolei_B5 1

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Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 4
PDB_chains_(SCOP_1.75)_(PDB) 2
STRING_v9.0.5_(STRING) 122
NCBI_2017_08_genome 2131
Uniprot_2018_03_genome 28370
Protein_Data_Bank_(all_PDB_sequenc) 10

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