SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 51905,_gap_,56801,_gap_,47336,_gap_,51161,51161,56634,51161 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51905 - FAD/NAD(P)-binding domain
56801 - Acetyl-CoA synthetase-like
47336 - ACP-like
51161 - Trimeric LpxA-like enzymes
51161 - Trimeric LpxA-like enzymes
56634 - Heme-dependent catalase-like
51161 - Trimeric LpxA-like enzymes

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1
Gossypium_raimondii_v221 1
Citrus_clementina_v165 1
Carica_papaya_   (Papaya)   1
Medicago_truncatula_   (Barrel medic)   1
Malus_domestica_v196   (Apple)   2
Prunus_persica_v139   (Peach)   1
Populus_trichocarpa_v156   (Black cottonwood)   1
Mimulus_guttatus_v140   (Spotted monkey flower)   1
Actinidia_chinensis_Hongyang_ 1
Musa_balbisiana   (Balbis banana)   0
Amborella_trichopoda_22 1

Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   2
NCBI_2017_08_genome 26
Uniprot_2018_03_genome 1530

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]