SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 51971,54373 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51971 - Nucleotide-binding domain
54373 - FAD-linked reductases, C-terminal domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   5
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   3
Pongo_abelii_76_2   (Sumatran orangutan)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Papio_anubis_76   (Olive baboon)   1
Macaca_mulatta_76_1   (Rhesus monkey)   3
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   2
Otolemur_garnettii_76_3   (Small-eared galago)   2
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Rattus_norvegicus_76_5.0   (Norway rat)   2
Mus_musculus_76_38   (House mouse)   4
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   2
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   3
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   2
Oryctolagus_cuniculus_76_2   (Rabbit)   2
Ochotona_princeps_76   (American pika)   1
Tupaia_belangeri_76   (Northern tree shrew)   2
Sus_scrofa_76_10.2   (Pig)   2
Bos_taurus_76_3.1   (Cattle)   2
Ovis_aries_76_3.1   (Sheep)   3
Tursiops_truncatus_76_1   (Bottlenose dolphin)   2
Mustela_putorius_furo_76_1.0   (Domestic ferret)   2
Ailuropoda_melanoleuca_76_1   (Giant panda)   2
Canis_familiaris_76_3.1   (Dog)   3
Felis_catus_76_6.2   (Domestic cat)   2
Equus_caballus_76_2   (Horse)   2
Myotis_lucifugus_76_2.0   (Little brown bat)   2
Pteropus_vampyrus_76_1   (Large flying fox)   1
Sorex_araneus_76_1   (European shrew)   2
Erinaceus_europaeus_76   (Western European hedgehog)   0
Procavia_capensis_76_1   (Cape rock hyrax)   2
Loxodonta_africana_76_3   (African savanna elephant)   2
Echinops_telfairi_76   (Small Madagascar hedgehog)   2
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   2
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   3
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_76_5   (Platypus)   2
Saccoglossus_kowalevskii_v3.0 1
Petromyzon_marinus_76_7.0   (Sea lamprey)   2
Meleagris_gallopavo_76_2   (Turkey)   2
Gallus_gallus_76_4   (Chicken)   1
Anas_platyrhynchos_76_1.0   (Mallard)   1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   2
Anolis_carolinensis_76_2.0   (Green anole)   1
Xenopus_laevis_   (African clawed frog)   2
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   2
Latimeria_chalumnae_76_1   (Coelacanth)   2
Lepisosteus_oculatus_76   (Spotted gar)   1
Gadus_morhua_76_1   (Atlantic cod)   2
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   2
Takifugu_rubripes_76_4   (Torafugu)   4
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   4
Oryzias_latipes_76_1   (Japanese medaka)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   2
Poecilia_formosa_76   (Amazon molly)   2
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1
Astyanax_mexicanus_76   (Mexican tetra)   2
Danio_rerio_76_9   (Zebrafish)   1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   2
Ciona_intestinalis_76   (Vase tunicate)   3
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   2
Adineta_vaga 0
Octopus_bimaculoides_280 5
Crassostrea_gigas_22   (Pacific oyster)   3
Lottia_gigantea_   (Owl limpet)   2
Helobdella_robusta_ 2
Capitella_sp._I_ 5
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1
Heliconius_melpomene_   (Postman butterfly)   2
Nasonia_vitripennis_   (Jewel wasp)   3
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   3
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1
Linepithema_humile_v1.1   (Argentine ant)   2
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   2
Atta_cephalotes_v1.1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   2
Lucilia_cuprina   (Australian sheep blowfly)   3
Drosophila_grimshawi_1.3 3
Drosophila_willistoni_1.3 2
Drosophila_pseudoobscura_2.13 4
Drosophila_persimilis_1.3 2
Drosophila_suzukii 2
Drosophila_yakuba_1.3 2
Drosophila_simulans_1.3 2
Drosophila_sechellia_1.3 2
Drosophila_melanogaster_76_5   (Fruit fly)   3
Drosophila_erecta_1.3 2
Drosophila_ananassae_1.3 2
Drosophila_virilis_1.2 2
Drosophila_mojavensis_1.3 2
Megaselia_scalaris_22 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   3
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   4
Anopheles_darlingi_22   (American malaria mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   4
Tribolium_castaneum_3.0   (Red flour beetle)   2
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1
Acyrthosiphon_pisum_   (Pea aphid)   1
Rhodnius_prolixus_22 1
Daphnia_pulex_   (Common water flea)   2
Strigamia_maritima_22 2
Sarcoptes_scabiei 0
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   3
Pristionchus_pacificus_ 1
Onchocerca_volvulus_22 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Caenorhabditis_japonica_ 3
Caenorhabditis_brenneri_ 3
Caenorhabditis_remanei_ 3
Caenorhabditis_elegans_76_235   (Roundworm)   3
Caenorhabditis_briggsae_2 3
Schistosoma_mansoni_ 0
Acropora_digitifera_v1.0 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   1
Hydra_vulgaris 0
Amphimedon_queenslandica 3
Trichoplax_adhaerens_ 4
Monosiga_brevicollis_ 1
Capsaspora_owczarzaki_ATCC_30864_ 1
Conidiobolus_coronatus_NRRL28638_v1.0 1
Mortierella_verticillata_NRRL_6337_ 0
Phycomyces_blakesleeanus_ 1
Rhizopus_oryzae_RA_99-880_ 2
Mucor_circinelloides_ 3
Rhizomucor_miehei_CAU432_ 2
Malassezia_globosa_CBS_7966_ 0
Sporisorium_reilianum_22 1
Ustilago_maydis_ 1
Mixia_osmundae_IAM_14324_v1.0 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 2
Melampsora_laricis-populina_ 1
Rhodotorula_graminis_WP1_v1.0 0
Sporobolomyces_roseus_IAM_13481_ 0
Wallemia_sebi_v1.0 0
Sphaerobolus_stellatus_v1.0 0
Piloderma_croceum_F_1598_v1.0 0
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Coniophora_puteana 0
Hydnomerulius_pinastri_v2.0 1
Paxillus_rubicundulus_Ve08.2h10_v1.0 0
Pisolithus_microcarpus_441_v1.0 0
Pisolithus_tinctorius_Marx_270_v1.0 0
Scleroderma_citrinum_Foug_A_v1.0 0
Coprinopsis_cinerea_okayama7_130_v3 0
Pleurotus_ostreatus_   (Oyster mushroom)   0
Amanita_thiersii_Skay4041_v1.0 0
Amanita_muscaria_Koide_v1.0   (Fly agaric)   0
Galerina_marginata_v1.0 0
Hebeloma_cylindrosporum_h7_v2.0 1
Laccaria_bicolor_S238N-H82_ 0
Agaricus_bisporus_var._bisporus_ 1
Schizophyllum_commune_ 1
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Heterobasidion_annosum_ 0
Gloeophyllum_trabeumv1.0 0
Punctularia_strigosozonata_v1.0 1
Sebacina_vermifera_MAFF_305830_v1.0 3
Fomitiporia_mediterranea_v1.0 0
Tulasnella_calospora_AL13/4D_v1.0 0
Postia_placenta_ 3
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1
Phanerochaete_chrysosporium_RP-78_2.1 1
Dichomitus_squalens 0
Trametes_versicolor_v1.0 0
Tremella_mesenterica_   (Witches' butter)   0
Daldinia_eschscholzii_EC12_v1.0 2
Apiospora_montagnei_NRRL_25634_v1.0 3
Magnaporthe_poae_ATCC_64411_22 0
Magnaporthe_grisea_70-15_ 2
Podospora_anserina_ 1
Sporotrichum_thermophile_ATCC_42464_ 3
Thielavia_terrestris_NRRL_8126_ 2
Chaetomium_globosum_CBS_148.51_ 3
Neurospora_tetrasperma_ 2
Neurospora_discreta_FGSC_8579_ 2
Neurospora_crassa_OR74A_ 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1
Verticillium_albo-atrum_VaMs.102_ 1
Verticillium_dahliae_VdLs.17_ 1
Acremonium_alcalophilumv_1.0 2
Glomerella_graminicola_22 1
Fusarium_graminearum_ 3
Nectria_haematococca_mpVI_ 9
Fusarium_oxysporum_f._sp._lycopersici_4286_ 10
Fusarium_verticillioides_7600_ 4
Trichoderma_asperellum_CBS_433.97_v1.0 4
Trichoderma_atroviride_ 3
Trichoderma_citrinoviride_v1.0 3
Trichoderma_reesei_1.2 3
Trichoderma_virens_Gv29-8_ 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3
Trichoderma_harzianum_CBS_226.95_v1.0 2
Amorphotheca_resinae_v1.0   (Creosote fungus)   3
Botrytis_cinerea_B05.10_ 1
Sclerotinia_sclerotiorum_ 1
Didymella_exigua_CBS_183.55_v1.0 3
Leptosphaeria_maculans_22 1
Setosphaeria_turcica_v1.0 4
Cochliobolus_miyabeanus_ATCC_44560_v1.0 3
Cochliobolus_victoriae_FI3_v1.0 4
Cochliobolus_carbonum_26-R-13_v1.0 4
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   2
Cochliobolus_lunatus_m118_v2.0 4
Pyrenophora_teres_f._teres_22 1
Pyrenophora_tritici-repentis_ 0
Stagonospora_nodorum_ 1
Mycosphaerella_graminicola_IPO323_ 2
Zasmidium_cellare_ATCC_36951_v1.0 4
Dothistroma_septosporum 0
Septoria_musiva_v1.0 2
Mycosphaerella_fijiensis_CIRAD86_ 2
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2
Paracoccidioides_brasiliensis_Pb18_ 0
Coccidioides_posadasii_RMSCC_3488_ 1
Coccidioides_immitis_RS_ 2
Ajellomyces_dermatitidis_SLH14081_ 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1
Microsporum_canis_CBS_113480_ 0
Trichophyton_equinum_CBS_127.97_ 0
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_tonsurans_CBS_112818_ 1
Trichophyton_rubrum_CBS_118892_ 1
Uncinocarpus_reesii_1704_ 1
Aspergillus_zonatus_v1.0 3
Penicillium_chrysogenum_Wisconsin_54-1255_ 5
Penicillium_chrysogenum_v1.0 5
Aspergillus_acidus_v1.0 4
Aspergillus_fumigatus_Af293 3
Aspergillus_brasiliensis_v1.0 4
Aspergillus_nidulans_FGSC_A4_ 3
Aspergillus_sydowii_v1.0 8
Aspergillus_versicolor_v1.0 6
Aspergillus_glaucus 3
Aspergillus_carbonarius_ITEM_5010_ 3
Neosartorya_fischeri_NRRL_181_ 4
Aspergillus_terreus_NIH2624_ 4
Aspergillus_tubingensis_v1.0 3
Aspergillus_wentii_v1.0 5
Aspergillus_oryzae_RIB40_ 5
Aspergillus_niger_22 4
Aspergillus_niger_ATCC_1015_ 2
Aspergillus_flavus_NRRL3357_ 4
Aspergillus_clavatus_NRRL_1_ 3
Penicillium_marneffei_ATCC_18224_ 4
Tuber_melanosporum_Mel28_22 2
Tuber_melanosporum_Vittad_   (Perigord truffle)   2
Hansenula_polymorpha_v2.0 6
Dekkera_bruxellensis_CBS_2499_v2.0 3
Pichia_membranifaciensv1.0 4
Candida_tanzawaensis_NRRL_Y-17324__v1.0 3
Candida_dubliniensis_CD36_ 3
Candida_tropicalis_MYA-3404_ 2
Candida_parapsilosis_ 3
Candida_albicans_SC5314 2
Lodderomyces_elongisporus_NRRL_YB-4239_ 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1
Pichia_stipitis_CBS_6054_ 3
Candida_guilliermondii_ATCC_6260_ 6
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 2
Debaromyces_hansenii 3
Wickerhamomyces_anomalus 3
Pichia_pastoris_GS115_ 2
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1
Yarrowia_lipolytica_CLIB122 3
Candida_lusitaniae_ATCC_42720_ 2
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 3
Vanderwaltozyma_polyspora_DSM_70294_ 1
Kluyveromyces_thermotolerans_CBS_6340 2
Lachancea_kluyveri_ 2
Kluyveromyces_waltii 2
Zygosaccharomyces_rouxii_ 3
Kluyveromyces_lactis 2
Schizosaccharomyces_cryophilus_OY26_22 1
Schizosaccharomyces_octosporus_yFS286_ 1
Schizosaccharomyces_japonicus_yFS275_ 1
Schizosaccharomyces_pombe   (Fission yeast)   1
Catenaria_anguillulae_PL171_v1.0 0
Allomyces_macrogynus_ATCC_38327_ 0
Spizellomyces_punctatus_DAOM_BR117_ 0
Dictyostelium_discoideum 2
Dictyostelium_purpureum_ 0
Prunus_persica_v139   (Peach)   0
Physcomitrella_patens 0
Asterochloris_sp._Cgr/DA1pho_v1.0 0
Chlorella_variabilis_sp._NC64A_ 1
Volvox_carteri_f._nagariensis_ 1
Volvox_carteri_v199 0
Ostreococcus_sp._RCC809_ 2
Ostreococcus_lucimarinus_CCE9901_ 1
Ostreococcus_tauri_ 2
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 0
Bigelowiella_natans_CCMP2755_22 0
Aureococcus_anophagefferens_ 2
Pythium_iwayamai_DAOM_BR242034_22 1
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_ultimum_v1.7-2 1
Pythium_aphanidermatum_DAOM_BR444_22 2
Pythium_irregulare_DAOM_BR486_22 1
Pythium_vexans_DAOM_BR484_22 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Phytophthora_sojae_1.1 1
Phytophthora_infestans_T30-4_ 2
Phytophthora_capsici_ 2
Hyaloperonospora_arabidopsidis_22 1
Fragilariopsis_cylindrus 1
Thalassiosira_pseudonana_CCMP1335 1
Paramecium_tetraurelia_ 1
Tetrahymena_thermophila_SB210_1_ 0
Symbiodinium_minutum_clade_B1_v1.2 0
Guillardia_theta_CCMP2712_v1.0_ 0
Emiliania_huxleyi_CCMP1516_ 2
Synechococcus_sp._CC9311 0
Prochlorococcus_marinus_str._MIT_9515 1
Gloeocapsa_sp._PCC_7428 0
Gloeobacter_violaceus_PCC_7421 1
Calothrix_sp._PCC_7507 0
'Nostoc_azollae'_0708 0
Nostoc_punctiforme_PCC_73102 0
Mycoplasma_mycoides_subsp._capri_LC_str._95010 1
Mycoplasma_crocodyli_MP145 1
Mycoplasma_mobile_163K 1
Mycoplasma_pneumoniae_309 0
Cryptobacterium_curtum_DSM_15641 1
Eggerthella_sp._YY7918 0
Eggerthella_lenta_DSM_2243 0
Slackia_heliotrinireducens_DSM_20476 1
Olsenella_uli_DSM_7084 0
Atopobium_parvulum_DSM_20469 0
Coriobacterium_glomerans_PW2 0
Rubrobacter_xylanophilus_DSM_9941 1
Thermobispora_bispora_DSM_43833 0
Nakamurella_multipartita_DSM_44233 0
Modestobacter_marinus 0
Blastococcus_saxobsidens_DD2 1
Geodermatophilus_obscurus_DSM_43160 1
Kineococcus_radiotolerans_SRS30216 1
Stackebrandtia_nassauensis_DSM_44728 1
Frankia_alni_ACN14a 0
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 0
Thermomonospora_curvata_DSM_43183 1
Streptosporangium_roseum_DSM_43021 1
Streptomyces_coelicolor_A3(2) 1
Streptomyces_sp._PAMC26508 1
Streptomyces_flavogriseus_ATCC_33331 1
Streptomyces_sp._SirexAA-E 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_bingchenggensis_BCW-1 1
Streptomyces_avermitilis_MA-4680 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 3
Streptomyces_scabiei_87.22 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1
Actinosynnema_mirum_DSM_43827 2
Saccharomonospora_viridis_DSM_43017 0
Pseudonocardia_dioxanivorans_CB1190 0
Saccharopolyspora_erythraea_NRRL_2338 1
Amycolatopsis_mediterranei_U32 1
Kribbella_flavida_DSM_17836 2
Nocardioides_sp._JS614 1
Microlunatus_phosphovorus_NM-1 1
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 1
Salinispora_tropica_CNB-440 1
Micromonospora_sp._L5 2
Micromonospora_aurantiaca_ATCC_27029 1
Actinoplanes_sp._N902-109 3
Actinoplanes_sp._SE50/110 1
Actinoplanes_missouriensis_431 2
Segniliparus_rotundus_DSM_44985 0
Tsukamurella_paurometabola_DSM_20162 2
Gordonia_sp._KTR9 1
Gordonia_polyisoprenivorans_VH2 1
Gordonia_bronchialis_DSM_43247 3
Rhodococcus_jostii_RHA1 1
Rhodococcus_equi_103S 0
Rhodococcus_opacus_B4 1
Rhodococcus_erythropolis_PR4 2
Nocardia_cyriacigeorgica_GUH-2 0
Nocardia_farcinica_IFM_10152 0
Amycolicicoccus_subflavus_DQS3-9A1 1
Mycobacterium_massiliense_str._GO_06 0
Mycobacterium_abscessus_ATCC_19977 0
Mycobacterium_sp._JLS 1
Mycobacterium_intracellulare_ATCC_13950 2
Mycobacterium_avium_104 1
Mycobacterium_vanbaalenii_PYR-1 0
Mycobacterium_canettii_CIPT_140010059 2
Mycobacterium_africanum_GM041182 2
Mycobacterium_tuberculosis_KZN_1435 2
Mycobacterium_tuberculosis 2
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 2
Mycobacterium_rhodesiae_NBB3 0
Mycobacterium_ulcerans_Agy99 2
Mycobacterium_gilvum_PYR-GCK 1
Mycobacterium_chubuense_NBB4 0
Mycobacterium_marinum_M 2
Mycobacterium_smegmatis_str._MC2_155 0
Mycobacterium_leprae_Br4923 1
Corynebacterium_resistens_DSM_45100 1
Corynebacterium_aurimucosum_ATCC_700975 0
Corynebacterium_kroppenstedtii_DSM_44385 1
Corynebacterium_efficiens_YS-314 0
Corynebacterium_ulcerans_0102 0
Corynebacterium_urealyticum_DSM_7109 0
Corynebacterium_jeikeium_K411 0
Corynebacterium_variabile_DSM_44702 2
Corynebacterium_pseudotuberculosis_316 0
Corynebacterium_glutamicum_R 0
Corynebacterium_diphtheriae_NCTC_13129 0
Sanguibacter_keddieii_DSM_10542 1
Beutenbergia_cavernae_DSM_12333 1
Microbacterium_testaceum_StLB037 1
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1
Jonesia_denitrificans_DSM_20603 1
Brachybacterium_faecium_DSM_4810 1
Isoptericola_variabilis_225 1
Xylanimonas_cellulosilytica_DSM_15894 1
Arthrobacter_phenanthrenivorans_Sphe3 0
Arthrobacter_chlorophenolicus_A6 0
Arthrobacter_aurescens_TC1 0
Arthrobacter_arilaitensis_Re117 1
Kocuria_rhizophila_DC2201 1
Rothia_mucilaginosa_DY-18 1
Rothia_dentocariosa_ATCC_17931 1
Arthrobacter_sp._Rue61a 0
Arthrobacter_sp._FB24 1
Renibacterium_salmoninarum_ATCC_33209 1
Bifidobacterium_longum_subsp._longum_JDM301 1
Bifidobacterium_animalis_subsp._lactis_Bl-04 1
Bifidobacterium_dentium_Bd1 1
Bifidobacterium_breve_ACS-071-V-Sch8b 1
Bifidobacterium_bifidum_S17 1
Bifidobacterium_adolescentis_ATCC_15703 1
Mobiluncus_curtisii_ATCC_43063 0
Truepera_radiovictrix_DSM_17093 1
Deinococcus_gobiensis_I-0 1
Deinococcus_deserti_VCD115 2
Deinococcus_maricopensis_DSM_21211 2
Deinococcus_geothermalis_DSM_11300 1
Deinococcus_proteolyticus_MRP 0
Deinococcus_radiodurans_R1 0
Meiothermus_silvanus_DSM_9946 2
Meiothermus_ruber_DSM_1279 1
Thermus_sp._CCB_US3_UF1 1
Thermus_scotoductus_SA-01 1
Thermus_thermophilus_HB27 1
Veillonella_parvula_DSM_2008 1
Megasphaera_elsdenii_DSM_20460 1
Acidaminococcus_intestini_RyC-MR95 1
Acidaminococcus_fermentans_DSM_20731 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 2
Erysipelothrix_rhusiopathiae_str._Fujisawa 1
Eubacterium_siraeum 2
Ethanoligenens_harbinense_YUAN-3 1
Faecalibacterium_prausnitzii 1
Ruminococcus_sp. 2
butyrate-producing_bacterium_SS3/4 2
butyrate-producing_bacterium_SM4/1 1
Desulfosporosinus_acidiphilus_SJ4 1
Desulfitobacterium_hafniense_Y51 1
Acetobacterium_woodii_DSM_1030 1
Eubacterium_eligens_ATCC_27750 0
Clostridium_saccharolyticum_WM1 1
Clostridium_phytofermentans_ISDg 1
[Ruminococcus]_obeum 1
[Ruminococcus]_torques 1
Eubacterium_rectale_M104/1 1
Eubacterium_rectale_ATCC_33656 1
Coprococcus_sp._ART55/1 1
Roseburia_hominis_A2-183 0
Roseburia_intestinalis 1
Butyrivibrio_proteoclasticus_B316 1
Butyrivibrio_fibrisolvens 1
Heliobacterium_modesticaldum_Ice1 0
Clostridium_ljungdahlii_DSM_13528 1
Clostridium_kluyveri_DSM_555 1
Clostridium_botulinum_A_str._ATCC_3502 1
Clostridium_acetobutylicum_ATCC_824 1
Caldicellulosiruptor_kronotskyensis_2002 1
Coprothermobacter_proteolyticus_DSM_5265 2
Thermoanaerobacter_italicus_Ab9 1
Halanaerobium_praevalens_DSM_2228 1
Weissella_koreensis_KACC_15510 1
Oenococcus_oeni_PSU-1 1
Leuconostoc_sp._C2 1
Leuconostoc_kimchii_IMSNU_11154 1
Leuconostoc_citreum_KM20 1
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 1
Leuconostoc_gasicomitatum_LMG_18811 1
Lactobacillus_crispatus_ST1 1
Lactobacillus_johnsonii_FI9785 1
Lactobacillus_sanfranciscensis_TMW_1.1304 2
Lactobacillus_salivarius_CECT_5713 1
Lactobacillus_ruminis_ATCC_27782 1
Lactobacillus_fermentum_IFO_3956 1
Lactobacillus_amylovorus_GRL1118 1
Lactobacillus_reuteri_DSM_20016 1
Lactobacillus_gasseri_ATCC_33323 1
Lactobacillus_helveticus_DPC_4571 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 1
Lactobacillus_acidophilus_30SC 1
Pediococcus_claussenii_ATCC_BAA-344 2
Pediococcus_pentosaceus_ATCC_25745 1
Lactococcus_garvieae_ATCC_49156 1
Lactococcus_lactis_subsp._cremoris_MG1363 1
Streptococcus_sp._I-P16 1
Streptococcus_sp._I-G2 1
Streptococcus_pseudopneumoniae_IS7493 1
Streptococcus_infantarius_subsp._infantarius_CJ18 1
Streptococcus_macedonicus_ACA-DC_198 1
Streptococcus_mitis_B6 1
Streptococcus_suis_P1/7 1
Streptococcus_oralis_Uo5 1
Exiguobacterium_sp._AT1b 1
Exiguobacterium_sibiricum_255-15 1
Listeria_innocua_Clip11262 1
Geobacillus_kaustophilus_HTA426 1
Geobacillus_sp._GHH01 1
Bacillus_weihenstephanensis_KBAB4 1
Haliscomenobacter_hydrossis_DSM_1100 2
Saprospira_grandis_str._Lewin 1
Niastella_koreensis_GR20-10 1
Chitinophaga_pinensis_DSM_2588 1
Candidatus_Amoebophilus_asiaticus_5a2 1
Belliella_baltica_DSM_15883 1
Marivirga_tractuosa_DSM_4126 1
Leadbetterella_byssophila_DSM_17132 1
Dyadobacter_fermentans_DSM_18053 1
Cytophaga_hutchinsonii_ATCC_33406 0
Spirosoma_linguale_DSM_74 2
Runella_slithyformis_DSM_19594 1
Prevotella_ruminicola_23 1
Bacteroides_salanitronis_DSM_18170 2
Bacteroides_vulgatus_ATCC_8482 1
Fluviicola_taffensis_DSM_16823 1
Owenweeksia_hongkongensis_DSM_17368 1
Krokinobacter_sp._4H-3-7-5 1
Lacinutrix_sp._5H-3-7-4 1
Maribacter_sp._HTCC2170 1
Robiginitalea_biformata_HTCC2501 1
Croceibacter_atlanticus_HTCC2559 2
Aequorivita_sublithincola_DSM_14238 1
Zobellia_galactanivorans 1
Muricauda_ruestringensis_DSM_13258 2
Cellulophaga_algicola_DSM_14237 1
Cellulophaga_lytica_DSM_7489 1
Flavobacteriaceae_bacterium_3519-10 0
Polaribacter_sp._MED152 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 2
Ornithobacterium_rhinotracheale_DSM_15997 1
Capnocytophaga_canimorsus_Cc5 1
Capnocytophaga_ochracea_DSM_7271 1
Flavobacterium_psychrophilum_JIP02/86 1
Flavobacterium_branchiophilum_FL-15 1
Flavobacterium_columnare_ATCC_49512 1
Flavobacterium_johnsoniae_UW101 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 1
Waddlia_chondrophila_WSU_86-1044 1
Parachlamydia_acanthamoebae_UV-7 1
Chlamydophila_pecorum_E58 1
Chlamydophila_pneumoniae_TW-183 1
Chlamydophila_caviae_GPIC 1
Chlamydophila_felis_Fe/C-56 1
Chlamydophila_abortus_S26/3 1
Chlamydia_psittaci_01DC11 1
Pirellula_staleyi_DSM_6068 1
Coraliomargarita_akajimensis_DSM_45221 1
Opitutus_terrae_PB90-1 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1
Borrelia_recurrentis_A1 0
Borrelia_duttonii_Ly 0
Spirochaeta_smaragdinae_DSM_11293 1
Treponema_primitia_ZAS-2 1
Treponema_brennaborense_DSM_12168 1
Thermodesulfobacterium_sp._OPB45 1
Fervidobacterium_nodosum_Rt17-B1 1
Desulfurobacterium_thermolithotrophum_DSM_11699 1
Sulfurihydrogenibium_sp._YO3AOP1 1
Thermocrinis_albus_DSM_14484 1
Candidatus_Chloracidobacterium_thermophilum_B 1
Granulicella_tundricola_MP5ACTX9 0
Terriglobus_saanensis_SP1PR4 1
Acidobacterium_capsulatum_ATCC_51196 0
Leptospirillum_ferrooxidans_C2-3 1
Acidithiobacillus_caldus_SM-1 1
Arcobacter_sp._L 0
Campylobacter_jejuni_subsp._doylei_269.97 1
Helicobacter_hepaticus_ATCC_51449 1
Helicobacter_cinaedi_PAGU611 1
Desulfovibrio_salexigens_DSM_2638 1
Geobacter_sp._M21 1
Geobacter_bemidjiensis_Bem 1
Sorangium_cellulosum_'So_ce_56' 2
Stigmatella_aurantiaca_DW4/3-1 1
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 0
Thauera_sp._MZ1T 1
Methylibium_petroleiphilum_PM1 0
Rubrivivax_gelatinosus_IL144 1
Leptothrix_cholodnii_SP-6 1
Burkholderia_rhizoxinica_HKI_454 1
Burkholderia_phytofirmans_PsJN 1
Burkholderia_sp._CCGE1002 1
Burkholderia_glumae_BGR1 0
Ramlibacter_tataouinensis_TTB310 1
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 0
Polaromonas_sp._JS666 1
Variovorax_paradoxus_S110 1
Comamonas_testosteroni_CNB-2 1
Taylorella_asinigenitalis_MCE3 1
Methylotenera_versatilis_301 1
Methylovorus_sp._MP688 1
Methylovorus_glucosetrophus_SIP3-4 1
Methylobacillus_flagellatus_KT 2
Parvularcula_bermudensis_HTCC2503 1
Asticcacaulis_excentricus_CB_48 0
Caulobacter_sp._K31 1
Caulobacter_crescentus_NA1000 2
Caulobacter_segnis_ATCC_21756 1
Phenylobacterium_zucineum_HLK1 0
Sphingobium_japonicum_UT26S 0
Sphingobium_chlorophenolicum_L-1 0
Dinoroseobacter_shibae_DFL_12 2
Phaeobacter_gallaeciensis_2.10 2
Pseudovibrio_sp._FO-BEG1 1
Ruegeria_pomeroyi_DSS-3 1
Ketogulonicigenium_vulgare_Y25 1
Ketogulonigenium_vulgarum_WSH-001 1
Roseobacter_denitrificans_OCh_114 1
Rhodobacter_sphaeroides_ATCC_17029 0
Rhodobacter_capsulatus_SB_1003 1
Paracoccus_denitrificans_PD1222 1
Azospirillum_lipoferum_4B 0
Azospirillum_brasilense_Sp245 0
Gluconacetobacter_xylinus_NBRC_3288 1
Gluconacetobacter_diazotrophicus_PAl_5 1
Gluconobacter_oxydans_621H 2
Acetobacter_pasteurianus_IFO_3283-01 2
alpha_proteobacterium_HIMB59 0
Anaplasma_marginale_str._Florida 0
Anaplasma_centrale_str._Israel 0
Starkeya_novella_DSM_506 1
Methylobacterium_sp._4-46 1
Methylobacterium_nodulans_ORS_2060 0
Sinorhizobium_fredii_NGR234 1
Sinorhizobium_medicae_WSM419 0
Sinorhizobium_meliloti_AK83 2
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1
Rhizobium_etli_CIAT_652 1
Agrobacterium_tumefaciens_str._C58 2
Agrobacterium_radiobacter_K84 2
Agrobacterium_sp._H13-3 1
Agrobacterium_vitis_S4 2
Mesorhizobium_sp._BNC1 1
Mesorhizobium_opportunistum_WSM2075 1
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1
Mesorhizobium_loti_MAFF303099 1
Beijerinckia_indica_subsp._indica_ATCC_9039 1
Oligotropha_carboxidovorans_OM4 1
Nitrobacter_hamburgensis_X14 1
Bradyrhizobium_japonicum_USDA_110 1
Bradyrhizobium_sp._ORS_278 1
Methylocystis_sp._SC2 1
Bartonella_tribocorum_CIP_105476 1
Bartonella_clarridgeiae_73 1
Bartonella_henselae_str._Houston-1 1
Bartonella_grahamii_as4aup 1
Bartonella_quintana_str._Toulouse 1
Bartonella_bacilliformis_KC583 1
Aggregatibacter_aphrophilus_NJ8700 1
Gallibacterium_anatis_UMN179 1
Actinobacillus_succinogenes_130Z 1
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1
Vibrio_parahaemolyticus_RIMD_2210633 0
Psychromonas_ingrahamii_37 1
Ferrimonas_balearica_DSM_9799 0
Shewanella_pealeana_ATCC_700345 1
Shewanella_putrefaciens_CN-32 1
Pseudoalteromonas_atlantica_T6c 2
Glaciecola_sp._4H-3-7+YE-5 0
Alcanivorax_borkumensis_SK2 0
Halomonas_elongata_DSM_2581 1
Methylomicrobium_alcaliphilum 0
Methylomonas_methanica_MC09 1
Dichelobacter_nodosus_VCS1703A 1
Frateuria_aurantia_DSM_6220 1
Xanthomonas_axonopodis_pv._citri_str._306 0
Xanthomonas_campestris_pv._campestris_str._B100 0
Halorhodospira_halophila_SL1 1
Nitrosococcus_halophilus_Nc4 1
gamma_proteobacterium_HdN1 0
Rahnella_sp._Y9602 1
Dickeya_dadantii_Ech703 1
Dickeya_zeae_Ech1591 0
Pectobacterium_wasabiae_WPP163 1
Pectobacterium_sp._SCC3193 1
Pantoea_sp._At-9b 1
Pantoea_vagans_C9-1 1
Pantoea_ananatis_LMG_20103 1
Erwinia_tasmaniensis_Et1/99 2
Erwinia_sp._Ejp617 2
Erwinia_pyrifoliae_Ep1/96 1
Erwinia_amylovora_ATCC_49946 2
Escherichia_blattae_DSM_4481 1
Enterobacteriaceae_bacterium_strain_FGI_57 1
Klebsiella_oxytoca_E718 1
Klebsiella_pneumoniae_NTUH-K2044 1
Citrobacter_koseri_ATCC_BAA-895 1
Pseudomonas_syringae_pv._tomato_str._DC3000 1
Pseudomonas_stutzeri_A1501 0
Pseudomonas_protegens_Pf-5 0
Pseudomonas_mendocina_ymp 1
Acinetobacter_oleivorans_DR1 0
Acinetobacter_baumannii_ATCC_17978 0
Cycloclasticus_sp._P1 1
Thioalkalimicrobium_cyclicum_ALM1 0
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1
Thermoplasmatales_archaeon_BRNA1 1
methanocaldococcus_infernus_ME 2
Methanothermobacter_thermautotrophicus_str._Delta_H 1
Methanosphaera_stadtmanae_DSM_3091 2
Methanobrevibacter_sp._AbM4 1
Methanobrevibacter_ruminantium_M1 1
Methanobrevibacter_smithii_ATCC_35061 1
Complete_genome_sequence_of_Methanobacterium_sp._Mb1 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   3
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   2
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   3
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   3
Cryptococcus_neoformans_var._grubii_H99_ 0
Cryptococcus_neoformans_B-3501A_ 0
Cryptococcus_neoformans_JEC21_ 0
Paracoccidioides_brasiliensis_Pb01_ 1
Paracoccidioides_brasiliensis_Pb03_ 1
Coccidioides_posadasii_str._Silveira_ 1
Coccidioides_immitis_RMSCC_3703_ 2
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 2
Ajellomyces_dermatitidis_ER-3_ 1
Histoplasma_capsulatum_H143 1
Histoplasma_capsulatum_H88 1
Histoplasma_capsulatum_G186AR 0
Aspergillus_fumigatus_A1163_ 4
Candida_albicans_WO-1_ 2
Schizosaccharomyces_pombe_972h-_ 1
Plasmodium_falciparum_HB3_ 0
Chroococcidiopsis_thermalis_PCC_7203 2
Cyanobium_gracile_PCC_6307 1
Synechococcus_sp._JA-2-3B'a(2-13) 0
Synechococcus_sp._JA-3-3Ab 0
Synechococcus_sp._CC9902 1
Synechococcus_sp._RCC307 0
Synechococcus_sp._CC9605 0
Synechococcus_sp._WH_8102 0
Synechococcus_sp._WH_7803 0
Prochlorococcus_marinus_str._NATL1A 1
Prochlorococcus_marinus_str._AS9601 1
Prochlorococcus_marinus_subsp._marinus_str._CCMP1375 1
Prochlorococcus_marinus_subsp._pastoris_str._CCMP1986 1
Prochlorococcus_marinus_str._MIT_9215 1
Prochlorococcus_marinus_str._MIT_9211 0
Prochlorococcus_marinus_str._MIT_9303 1
Prochlorococcus_marinus_str._NATL2A 1
Crinalium_epipsammum_PCC_9333 0
Oscillatoria_nigro-viridis_PCC_7112 0
Cyanothece_sp._PCC_7822 0
Cyanothece_sp._PCC_7425 0
Cylindrospermum_stagnale_PCC_7417 0
Anabaena_cylindrica_PCC_7122 1
Mycoplasma_mycoides_subsp._mycoides_SC_str._Gladysdale 3
Mycoplasma_mycoides_subsp._mycoides_SC_str._PG1 3
Mycoplasma_pneumoniae_FH 1
Mycoplasma_pneumoniae_M129 0
Gordonibacter_pamelaeae_7-10-1-b 0
Adlercreutzia_equolifaciens_DSM_19450 0
Streptomyces_albus_J1074 1
Streptomyces_davawensis_JCM_4913 1
Streptomyces_fulvissimus_DSM_40593 2
Streptomyces_collinus_Tu_365 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 2
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1
Saccharothrix_espanaensis_DSM_44229 2
Amycolatopsis_mediterranei_RB 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_orientalis_HCCB10007 1
Actinoplanes_friuliensis_DSM_7358 1
Rhodococcus_pyridinivorans_SB3094 0
Rhodococcus_erythropolis_CCM2595 1
Nocardia_brasiliensis_ATCC_700358 1
Mycobacterium_sp._MOTT36Y 2
Mycobacterium_sp._JDM601 1
Mycobacterium_abscessus_subsp._bolletii_50594 0
Mycobacterium_liflandii_128FXT 2
Mycobacterium_sp._KMS 1
Mycobacterium_sp._MCS 1
Mycobacterium_yongonense_05-1390 2
Mycobacterium_intracellulare_MOTT-64 2
Mycobacterium_indicus_pranii_MTCC_9506 2
Mycobacterium_intracellulare_MOTT-02 2
Mycobacterium_avium_subsp._paratuberculosis_MAP4 2
Mycobacterium_avium_subsp._paratuberculosis_K-10 2
Mycobacterium_canettii_CIPT_140070017 2
Mycobacterium_canettii_CIPT_140060008 2
Mycobacterium_canettii_CIPT_140070008 2
Mycobacterium_canettii_CIPT_140070010 2
Mycobacterium_tuberculosis_EAI5/NITR206 2
Mycobacterium_tuberculosis_EAI5 2
Mycobacterium_tuberculosis_CAS/NITR204 2
Mycobacterium_tuberculosis_str._Beijing/NITR203 2
Mycobacterium_tuberculosis_UT205 2
Mycobacterium_tuberculosis_RGTB423 2
Mycobacterium_tuberculosis_RGTB327 1
Mycobacterium_tuberculosis_CTRI-2 2
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 2
Mycobacterium_tuberculosis_KZN_605 2
Mycobacterium_tuberculosis_KZN_4207 2
Mycobacterium_tuberculosis_CCDC5180 2
Mycobacterium_tuberculosis_CCDC5079 2
Mycobacterium_tuberculosis_CCDC5079 2
Mycobacterium_tuberculosis_H37Ra 2
Mycobacterium_tuberculosis_str._Haarlem/NITR202 3
Mycobacterium_tuberculosis_str._Haarlem 2
Mycobacterium_tuberculosis_F11 2
Mycobacterium_tuberculosis_H37Rv 2
Mycobacterium_tuberculosis_CDC1551 2
Mycobacterium_bovis_AF2122/97 2
Mycobacterium_bovis_BCG_str._Korea_1168P 2
Mycobacterium_bovis_BCG_str._Mexico 2
Mycobacterium_bovis_BCG_str._Tokyo_172 2
Mycobacterium_gilvum_Spyr1 1
Mycobacterium_smegmatis_str._MC2_155 0
Mycobacterium_leprae_TN 1
Mycobacterium_kansasii_ATCC_12478 2
Corynebacterium_maris_DSM_45190 0
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1
Corynebacterium_terpenotabidum_Y-11 2
Corynebacterium_ulcerans_BR-AD22 0
Corynebacterium_ulcerans_809 0
Corynebacterium_urealyticum_DSM_7111 0
Corynebacterium_argentoratense_DSM_44202 1
Corynebacterium_callunae_DSM_20147 0
Corynebacterium_pseudotuberculosis_258 0
Corynebacterium_pseudotuberculosis_Cp162 0
Corynebacterium_pseudotuberculosis_P54B96 0
Corynebacterium_pseudotuberculosis_267 0
Corynebacterium_pseudotuberculosis_1/06-A 0
Corynebacterium_pseudotuberculosis_42/02-A 0
Corynebacterium_pseudotuberculosis_3/99-5 0
Corynebacterium_pseudotuberculosis_31 0
Corynebacterium_pseudotuberculosis_CIP_52.97 0
Corynebacterium_pseudotuberculosis_PAT10 0
Corynebacterium_pseudotuberculosis_I19 0
Corynebacterium_pseudotuberculosis_FRC41 0
Corynebacterium_pseudotuberculosis_C231 0
Corynebacterium_pseudotuberculosis_1002 0
Corynebacterium_glutamicum_MB001 0
Corynebacterium_glutamicum_SCgG2 0
Corynebacterium_glutamicum_SCgG1 0
Corynebacterium_glutamicum_ATCC_13032 0
Corynebacterium_glutamicum_ATCC_13032 0
Corynebacterium_glutamicum_ATCC_13032 0
Corynebacterium_diphtheriae_BH8 1
Corynebacterium_diphtheriae_INCA_402 1
Corynebacterium_diphtheriae_VA01 1
Corynebacterium_diphtheriae_HC04 1
Corynebacterium_diphtheriae_HC03 1
Corynebacterium_diphtheriae_HC02 1
Corynebacterium_diphtheriae_HC01 1
Corynebacterium_diphtheriae_241 1
Corynebacterium_diphtheriae_CDCE_8392 1
Corynebacterium_diphtheriae_PW8 1
Corynebacterium_diphtheriae_C7_(beta) 1
Corynebacterium_diphtheriae_31A 1
Clavibacter_michiganensis_subsp._sepedonicus 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1
Bifidobacterium_longum_NCC2705 1
Bifidobacterium_longum_DJO10A 1
Bifidobacterium_longum_subsp._infantis_157F 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1
Bifidobacterium_longum_subsp._longum_KACC_91563 1
Bifidobacterium_longum_subsp._longum_BBMN68 1
Bifidobacterium_longum_subsp._longum_F8 0
Bifidobacterium_longum_subsp._longum_JCM_1217 0
Bifidobacterium_thermophilum_RBL67 1
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 1
Bifidobacterium_animalis_subsp._lactis_Bl12 1
Bifidobacterium_animalis_subsp._lactis_B420 1
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 1
Bifidobacterium_animalis_subsp._lactis_BLC1 1
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 0
Bifidobacterium_animalis_subsp._lactis_Bi-07 1
Bifidobacterium_animalis_subsp._lactis_V9 1
Bifidobacterium_animalis_subsp._lactis_DSM_10140 1
Bifidobacterium_animalis_subsp._lactis_BB-12 0
Bifidobacterium_animalis_subsp._lactis_AD011 1
Bifidobacterium_breve_UCC2003 1
Bifidobacterium_asteroides_PRL2011 1
Bifidobacterium_bifidum_PRL2010 1
Bifidobacterium_bifidum_BGN4 2
Actinomyces_odontolyticus_ATCC_17982 1
Deinococcus_peraridilitoris_DSM_19664 1
Thermus_oshimai_JL-2 2
Thermus_thermophilus_JL-18 2
Thermus_thermophilus_SG0.5JP17-16 2
Thermus_thermophilus_HB8 1
Erysipelothrix_rhusiopathiae_SY1027 1
Eubacterium_siraeum_V10Sc8a 2
Faecalibacterium_prausnitzii_L2-6 1
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1
Coprococcus_catus_GD/7 1
Roseburia_intestinalis_XB6B4 1
Clostridium_sp._SY8519 1
Clostridium_autoethanogenum_DSM_10061 1
Clostridium_kluyveri_NBRC_12016 1
Clostridium_botulinum_H04402_065 1
Clostridium_botulinum_F_str._230613 1
Clostridium_botulinum_F_str._Langeland 1
Clostridium_botulinum_B1_str._Okra 1
Clostridium_botulinum_Ba4_str._657 1
Clostridium_botulinum_A2_str._Kyoto 1
Clostridium_botulinum_A3_str._Loch_Maree 1
Clostridium_botulinum_A_str._Hall 1
Clostridium_botulinum_A_str._ATCC_19397 1
Clostridium_acetobutylicum_DSM_1731 1
Clostridium_acetobutylicum_EA_2018 1
Carnobacterium_maltaromaticum_LMA28 1
Enterococcus_faecalis_V583 1
Leuconostoc_carnosum_JB16 1
Leuconostoc_mesenteroides_subsp._mesenteroides_J18 1
Leuconostoc_gelidum_JB7 1
Lactobacillus_casei_LOCK919 1
Lactobacillus_rhamnosus_ATCC_8530 1
Lactobacillus_rhamnosus_GG 1
Lactobacillus_rhamnosus_GG 1
Lactobacillus_johnsonii_DPC_6026 1
Lactobacillus_johnsonii_NCC_533 1
Lactobacillus_salivarius_UCC118 1
Lactobacillus_fermentum_F-6 1
Lactobacillus_reuteri_TD1 1
Lactobacillus_reuteri_I5007 1
Lactobacillus_reuteri_JCM_1112 1
Lactobacillus_reuteri_SD2112 1
Lactobacillus_plantarum_ZJ316 1
Lactobacillus_plantarum_subsp._plantarum_ST-III 2
Lactobacillus_plantarum_WCFS1 2
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 2
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842 2
Lactobacillus_delbrueckii_subsp._bulgaricus_2038 1
Pediococcus_pentosaceus_SL4 1
Lactococcus_garvieae_Lg2 1
Lactococcus_lactis_subsp._lactis_IO-1 1
Lactococcus_lactis_subsp._lactis_KF147 1
Lactococcus_lactis_subsp._cremoris_KW2 2
Lactococcus_lactis_subsp._cremoris_NZ9000 1
Lactococcus_lactis_subsp._cremoris_SK11 1
Streptococcus_anginosus_C1051 1
Streptococcus_lutetiensis_033 1
Streptococcus_pneumoniae_D39 1
Streptococcus_pneumoniae_R6 1
Streptococcus_thermophilus_MN-ZLW-002 1
Streptococcus_thermophilus_JIM_8232 1
Streptococcus_suis_T15 1
Streptococcus_suis_TL13 2
Streptococcus_suis_SC070731 1
Streptococcus_suis_S735 1
Streptococcus_suis_ST3 1
Streptococcus_suis_D9 2
Streptococcus_suis_SS12 1
Streptococcus_suis_D12 1
Streptococcus_suis_ST1 1
Streptococcus_suis_A7 1
Streptococcus_suis_JS14 1
Streptococcus_suis_BM407 1
Streptococcus_suis_SC84 1
Streptococcus_suis_GZ1 1
Streptococcus_suis_98HAH33 1
Streptococcus_suis_05ZYH33 1
Streptococcus_salivarius_JIM8777 1
Exiguobacterium_antarcticum_B7 1
Geobacillus_sp._Y412MC52 1
Geobacillus_sp._Y412MC61 1
Amphibacillus_xylanus_NBRC_15112 1
Prevotella_sp._oral_taxon_299_str._F0039 1
Prevotella_dentalis_DSM_3688 0
Bacteroides_xylanisolvens_XB1A 1
Bacteroides_fragilis_NCTC_9343 1
Nonlabens_dokdonensis_DSW-6 1
Psychroflexus_torquis_ATCC_700755 1
Riemerella_anatipestifer_RA-CH-2 2
Riemerella_anatipestifer_RA-CH-1 1
Riemerella_anatipestifer_RA-GD 2
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 2
Fibrobacter_succinogenes_subsp._succinogenes_S85 1
Chlamydia_pecorum_P787 1
Chlamydia_pecorum_W73 1
Chlamydia_pecorum_PV3056/3 1
Chlamydophila_pneumoniae_J138 1
Chlamydophila_pneumoniae_CWL029 1
Chlamydophila_pneumoniae_AR39 1
Chlamydia_psittaci_01DC12 1
Chlamydia_psittaci_WC 1
Chlamydia_psittaci_M56 1
Chlamydia_psittaci_WS/RT/E30 1
Chlamydia_psittaci_VS225 1
Chlamydia_psittaci_MN 1
Chlamydia_psittaci_GR9 1
Chlamydia_psittaci_84/55 1
Chlamydia_psittaci_08DC60 1
Chlamydia_psittaci_02DC15 1
Chlamydia_psittaci_C19/98 1
Chlamydia_psittaci_NJ1 1
Chlamydia_psittaci_CP3 1
Chlamydophila_psittaci_RD1 1
Chlamydia_psittaci_Mat116 1
Chlamydophila_psittaci_6BC 1
Chlamydophila_psittaci_6BC 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1
Leptospirillum_ferriphilum_ML-04 1
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 1
Campylobacter_jejuni_subsp._jejuni_00-2544 1
Campylobacter_jejuni_subsp._jejuni_00-2538 1
Campylobacter_jejuni_subsp._jejuni_00-2426 1
Campylobacter_jejuni_subsp._jejuni_00-2425 1
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 2
Campylobacter_jejuni_subsp._jejuni_M1 1
Campylobacter_jejuni_subsp._jejuni_81116 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 1
Desulfobacula_toluolica_Tol2 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2
Sorangium_cellulosum_So0157-2 2
Myxococcus_stipitatus_DSM_14675 1
Pandoraea_pnomenusa_3kgm 1
Burkholderia_cenocepacia_J2315 1
Variovorax_paradoxus_B4 1
Variovorax_paradoxus_EPS 1
Taylorella_asinigenitalis_14/45 1
Caulobacter_crescentus_CB15 1
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 1
Phaeobacter_gallaeciensis_DSM_17395 2
Phaeobacter_gallaeciensis_DSM_26640 1
Leisingera_methylohalidivorans_DSM_14336 1
Octadecabacter_antarcticus_307 1
Octadecabacter_arcticus_238 1
Rhodobacter_sphaeroides_KD131 0
Rhodobacter_sphaeroides_ATCC_17025 1
Rhodobacter_sphaeroides_2.4.1 0
Paracoccus_aminophilus_JCM_7686 1
Gluconacetobacter_diazotrophicus_PAl_5 1
Gluconobacter_oxydans_H24 1
Acetobacter_pasteurianus_386B 2
Acetobacter_pasteurianus_IFO_3283-12 2
Acetobacter_pasteurianus_IFO_3283-01-42C 2
Acetobacter_pasteurianus_IFO_3283-32 2
Acetobacter_pasteurianus_IFO_3283-26 2
Acetobacter_pasteurianus_IFO_3283-22 2
Acetobacter_pasteurianus_IFO_3283-07 2
Acetobacter_pasteurianus_IFO_3283-03 2
Anaplasma_marginale_str._Dawn 0
Anaplasma_marginale_str._Gypsy_Plains 0
Anaplasma_marginale_str._St._Maries 0
Brucella_melitensis_NI 1
Brucella_melitensis_M5-90 1
Brucella_melitensis_M28 1
Sinorhizobium_fredii_USDA_257 3
Sinorhizobium_fredii_HH103 2
Sinorhizobium_meliloti_2011 1
Sinorhizobium_meliloti_GR4 1
Sinorhizobium_meliloti_Rm41 2
Sinorhizobium_meliloti_SM11 3
Sinorhizobium_meliloti_BL225C 1
Sinorhizobium_meliloti_1021 1
Rhizobium_etli_CFN_42 1
Rhizobium_etli_bv._mimosae_str._Mim1 1
Rhizobium_tropici_CIAT_899 2
Rhizobium_leguminosarum_bv._trifolii_WSM2304 0
Rhizobium_leguminosarum_bv._trifolii_WSM1325 0
Liberibacter_crescens_BT-1 1
Mesorhizobium_australicum_WSM2073 1
Hyphomicrobium_nitrativorans_NL23 1
Oligotropha_carboxidovorans_OM5 2
Oligotropha_carboxidovorans_OM5 2
Rhodopseudomonas_palustris_HaA2 1
Rhodopseudomonas_palustris_BisB18 1
Bradyrhizobium_sp._S23321 1
Bradyrhizobium_sp._BTAi1 1
Bradyrhizobium_japonicum_USDA_6 1
Bartonella_australis_Aust/NH1 1
Bartonella_vinsonii_subsp._berkhoffii_str._Winnie 1
Bartonella_quintana_RM-11 1
Simiduia_agarivorans_SA1_=_DSM_21679 0
Mannheimia_succiniciproducens_MBEL55E 1
Mannheimia_haemolytica_D171 1
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 1
Vibrio_sp._EJY3 1
Vibrio_parahaemolyticus_BB22OP 0
Glaciecola_psychrophila_170 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1
Alteromonas_macleodii_AltDE1 1
Alcanivorax_dieselolei_B5 1
Xanthomonas_citri_subsp._citri_Aw12879 0
Xanthomonas_campestris_pv._vesicatoria_str._85-10 0
Xanthomonas_axonopodis_pv._citrumelo_F1 0
Xanthomonas_axonopodis_Xac29-1 0
Xanthomonas_campestris_pv._raphani_756C 0
Xanthomonas_campestris_pv._campestris_str._8004 0
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 0
Coxiella_burnetii_CbuK_Q154 1
Proteus_mirabilis_BB2000 1
Serratia_plymuthica_S13 1
Pantoea_ananatis_LMG_5342 1
Pantoea_ananatis_PA13 1
Pantoea_ananatis_AJ13355 1
Erwinia_pyrifoliae_DSM_12163 1
Erwinia_amylovora_CFBP1430 1
Raoultella_ornithinolytica_B6 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 1
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1
Klebsiella_oxytoca_KCTC_1686 1
Klebsiella_pneumoniae_CG43 1
Klebsiella_pneumoniae_KCTC_2242 1
Klebsiella_pneumoniae_subsp._pneumoniae_1084 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1
Escherichia_coli_DH1 1
Escherichia_coli_DH1 1
Escherichia_coli_SMS-3-5 1
Escherichia_coli_SE15 1
Escherichia_coli_BW2952 1
Escherichia_coli_str._K-12_substr._MG1655 1
Escherichia_coli_str._K-12_substr._W3110 1
Escherichia_coli_str._K-12_substr._DH10B 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1
Pseudomonas_syringae_pv._phaseolicola_1448A 1
Pseudomonas_syringae_pv._syringae_B728a 1
Pseudomonas_stutzeri_CCUG_29243 0
Pseudomonas_stutzeri_DSM_10701 0
Pseudomonas_stutzeri_DSM_4166 0
Pseudomonas_stutzeri_RCH2 0
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 0
Pseudomonas_protegens_CHA0 0
Acinetobacter_genomosp._13TU__RUH2624 1
Acinetobacter_baumannii_ZW85-1 0
Acinetobacter_baumannii_TYTH-1 0
Acinetobacter_baumannii_BJAB0868 0
Acinetobacter_baumannii_BJAB0715 0
Acinetobacter_baumannii_BJAB07104 0
Acinetobacter_baumannii_TCDC-AB0715 0
Acinetobacter_baumannii_MDR-TJ 0
Acinetobacter_baumannii_1656-2 0
Acinetobacter_baumannii__ATCC_19606 0
Acinetobacter_baumannii_AB307-0294 0
Acinetobacter_baumannii_AYE 0
Acinetobacter_baumannii_SDF 0
Acinetobacter_baumannii_MDR-ZJ06 0
Acinetobacter_baumannii_AB0057 0
Acinetobacter_baumannii_ACICU 0
Acinetobacter_radioresistens__SH164 0
Acinetobacter_junii__SH205 0
Acinetobacter_johnsonii__SH046 0
Acinetobacter_lwoffii__SH145 0
Cycloclasticus_zancles_7-ME 1
Candidatus_Methanomethylophilus_alvus_Mx1201 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   2
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_69_3.1   (Western gorilla)   2
Pongo_abelii_69_2   (Sumatran orangutan)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Macaca_mulatta_69_1   (Rhesus monkey)   2
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   2
Otolemur_garnettii_69_3   (Small-eared galago)   2
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Rattus_norvegicus_69_3.4   (Norway rat)   2
Mus_musculus_69_38   (House mouse)   2
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   2
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   2
Cavia_porcellus_69_3   (Domestic guinea pig)   2
Oryctolagus_cuniculus_69_2   (Rabbit)   3
Ochotona_princeps_69   (American pika)   1
Tupaia_belangeri_69   (Northern tree shrew)   2
Sus_scrofa_69_10.2   (Pig)   2
Bos_taurus_69_3.1   (Cattle)   2
Tursiops_truncatus_69_1   (Bottlenose dolphin)   2
Mustela_putorius_furo_69_1.0   (Domestic ferret)   2
Ailuropoda_melanoleuca_69_1   (Giant panda)   2
Canis_familiaris_69_3.1   (Dog)   1
Felis_catus_69   (Domestic cat)   2
Equus_caballus_69_2   (Horse)   2
Myotis_lucifugus_69_2.0   (Little brown bat)   2
Pteropus_vampyrus_69_1   (Large flying fox)   1
Sorex_araneus_69_1   (European shrew)   2
Erinaceus_europaeus_69   (Western European hedgehog)   0
Procavia_capensis_69_1   (Cape rock hyrax)   2
Loxodonta_africana_69_3   (African savanna elephant)   2
Echinops_telfairi_69   (Small Madagascar hedgehog)   2
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1
Macropus_eugenii_69_1.0   (Tammar wallaby)   2
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   2
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_69_5   (Platypus)   2
Petromyzon_marinus_69_7.0   (Sea lamprey)   2
Meleagris_gallopavo_69_2   (Turkey)   2
Gallus_gallus_69_2   (Chicken)   2
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1
Anolis_carolinensis_69_2.0   (Green anole)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   2
Latimeria_chalumnae_69_1   (Coelacanth)   2
Gadus_morhua_69_1   (Atlantic cod)   2
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   2
Takifugu_rubripes_69_4   (Torafugu)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   2
Oryzias_latipes_69_1   (Japanese medaka)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   2
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1
Danio_rerio_69_9   (Zebrafish)   1
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   2
Ciona_intestinalis_69   (Vase tunicate)   2
Drosophila_melanogaster_69_5   (Fruit fly)   2
Caenorhabditis_elegans_69_215   (Roundworm)   3

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   5
Homo_sapiens__(NCBI_version)   (Human)   3
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   2
Heliconius_numata__(Incomplete) 1
Loa_loa_v3.3_(Request)   (Eye worm)   0
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   0
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 2
NCBI_plasmid_sequences_(Plasmids) 38
TargetDB__(Targets) 14
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 41
Protein_Data_Bank_(all_PDB_sequenc) 143
STRING_v9.0.5_(STRING) 470
Uniprot_2018_03_genome 30219
NCBI_2017_08_genome 32768
NCBI_viral_sequences_(Viral) 4
UniProt__viral_sequences_(Viral) 1
PDB_chains_(SCOP_1.75)_(PDB) 5

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