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Domain combinations for 51989,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51989 - Glycosyl hydrolases family 6, cellulases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Oikopleura_dioica 0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_76   (Vase tunicate)   0
Sphaerobolus_stellatus_v1.0 1
Aureococcus_anophagefferens_ 0
Pythium_iwayamai_DAOM_BR242034_22 2
Pythium_arrhenomanes_ATCC_12531_22 5
Pythium_ultimum_v1.7-2 3
Pythium_aphanidermatum_DAOM_BR444_22 2
Pythium_irregulare_DAOM_BR486_22 6
Pythium_vexans_DAOM_BR484_22 2
Phytophthora_ramorum_1.1   (Sudden oak death agent)   7
Phytophthora_sojae_1.1 4
Phytophthora_infestans_T30-4_ 3
Phytophthora_capsici_ 3
Hyaloperonospora_arabidopsidis_22 4
Symbiodinium_minutum_clade_B1_v1.2 0
Thermobispora_bispora_DSM_43833 0
Acidothermus_cellulolyticus_11B 1
Catenulispora_acidiphila_DSM_44928 1
Stackebrandtia_nassauensis_DSM_44728 0
Thermobifida_fusca_YX 0
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 0
Streptosporangium_roseum_DSM_43021 0
Kitasatospora_setae_KM-6054 1
Streptomyces_coelicolor_A3(2) 0
Streptomyces_sp._PAMC26508 0
Streptomyces_flavogriseus_ATCC_33331 0
Streptomyces_sp._SirexAA-E 0
Streptomyces_griseus_subsp._griseus_NBRC_13350 0
Streptomyces_bingchenggensis_BCW-1 0
Streptomyces_violaceusniger_Tu_4113 0
Streptomyces_avermitilis_MA-4680 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_scabiei_87.22 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1
Actinosynnema_mirum_DSM_43827 0
Amycolatopsis_mediterranei_U32 0
Salinispora_arenicola_CNS-205 0
Salinispora_tropica_CNB-440 0
Verrucosispora_maris_AB-18-032 0
Micromonospora_sp._L5 0
Micromonospora_aurantiaca_ATCC_27029 0
Actinoplanes_sp._N902-109 1
Actinoplanes_sp._SE50/110 0
Actinoplanes_missouriensis_431 0
Jonesia_denitrificans_DSM_20603 0
Isoptericola_variabilis_225 1
Xylanimonas_cellulosilytica_DSM_15894 1
Cellulomonas_flavigena_DSM_20109 0
Cellulomonas_fimi_ATCC_484 1
[Cellvibrio]_gilvus_ATCC_13127 0
Herpetosiphon_aurantiacus_DSM_785 0
Paenibacillus_terrae_HPL-003 0
Paenibacillus_mucilaginosus_3016 0
Paenibacillus_polymyxa_M1 0
Stigmatella_aurantiaca_DW4/3-1 0
Novosphingobium_sp._PP1Y 1
Saccharophagus_degradans_2-40 0
Teredinibacter_turnerae_T7901 0
Cellvibrio_japonicus_Ueda107 0
Shewanella_violacea_DSS12 0
Hahella_chejuensis_KCTC_2396 0
Xylella_fastidiosa_M23 0
Xanthomonas_albilineans_GPE_PC73 0
Xanthomonas_oryzae_pv._oryzae_PXO99A 0
Xanthomonas_campestris_pv._campestris_str._B100 0

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Strains
Genome     Number
Nocardiopsis_alba_ATCC_BAA-2165 0
Streptomyces_albus_J1074 0
Streptomyces_rapamycinicus_NRRL_5491 0
Streptomyces_davawensis_JCM_4913 0
Streptomyces_fulvissimus_DSM_40593 0
Streptomyces_venezuelae_ATCC_10712 2
Streptomyces_collinus_Tu_365 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Actinoplanes_friuliensis_DSM_7358 0
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Paenibacillus_polymyxa_CR1 0
Paenibacillus_polymyxa_SC2 0
Paenibacillus_polymyxa_E681 0
Xylella_fastidiosa_M12 0
Xylella_fastidiosa_Temecula1 0
Xylella_fastidiosa_9a5c 0
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 0
Xanthomonas_oryzae_pv._oryzae_KACC_10331 0
Xanthomonas_campestris_pv._raphani_756C 0
Xanthomonas_campestris_pv._campestris_str._8004 0
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 0

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Longest transcript per gene
Genome     Number
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_69   (Vase tunicate)   0

Others
Genome     Number
Protein_Data_Bank_(all_PDB_sequenc) 1
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 12
STRING_v9.0.5_(STRING) 14
Uniprot_2018_03_genome 807
TargetDB__(Targets) 1
NCBI_2017_08_genome 310

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