SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 52058,52047,52058,52058,_gap_,52200,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52058 - L domain-like
52047 - RNI-like
52058 - L domain-like
52058 - L domain-like
52200 - Toll/Interleukin receptor TIR domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Drosophila_suzukii 0
Drosophila_yakuba_1.3 1
Drosophila_melanogaster_76_5   (Fruit fly)   1
Drosophila_ananassae_1.3 1
Drosophila_virilis_1.2 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   0

Strains
Genome     Number
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   1

Longest transcript per gene
Genome     Number
Drosophila_melanogaster_69_5   (Fruit fly)   1

Others
Genome     Number
NCBI_2017_08_genome 11
Uniprot_2018_03_genome 225
STRING_v9.0.5_(STRING) 4

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