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Home > SCOP hierarchy > Domain combination - 52058,52058,_gap_,50156,50156,_gap_,50156,50156,_gap_

Domain combinations for 52058,52058,_gap_,50156,50156,_gap_,50156,50156,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52058 - L domain-like
52058 - L domain-like
50156 - PDZ domain-like
50156 - PDZ domain-like
50156 - PDZ domain-like
50156 - PDZ domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 2

Pan_troglodytes_76_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_76_3.1 (Western gorilla) 1

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 1

Microcebus_murinus_76_1 (Gray mouse lemur) 1

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 1

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 1

Ailuropoda_melanoleuca_76_1 (Giant panda) 1

Canis_familiaris_76_3.1 (Dog) 0

Equus_caballus_76_2 (Horse) 1

Anas_platyrhynchos_76_1.0 (Mallard) 1

Lepisosteus_oculatus_76 (Spotted gar) 2

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 1

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 1

Oreochromis_niloticus_76_1.0 (Nile tilapia) 1

Danio_rerio_76_9 (Zebrafish) 1

Helobdella_robusta_ 1

Longest transcript per gene
Genome Number

Pan_troglodytes_69_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_69_3.1 (Western gorilla) 1

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 1

Microcebus_murinus_69_1 (Gray mouse lemur) 1

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 1

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 1

Ailuropoda_melanoleuca_69_1 (Giant panda) 1

Canis_familiaris_69_3.1 (Dog) 0

Equus_caballus_69_2 (Horse) 1

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 1

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 1

Danio_rerio_69_9 (Zebrafish) 1

Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 2

Homo_sapiens__(NCBI_version) (Human) 2

STRING_v9.0.5_(STRING) 3

Uniprot_2018_03_genome 5214

NCBI_2017_08_genome 471

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