SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Home > SCOP hierarchy > Domain combination - 52058,57184,52058,49265,_gap_,49265,_gap_,56112,_gap_

Domain combinations for 52058,57184,52058,49265,_gap_,49265,_gap_,56112,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52058 - L domain-like
57184 - Growth factor receptor domain
52058 - L domain-like
49265 - Fibronectin type III
49265 - Fibronectin type III
56112 - Protein kinase-like (PK-like)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 1

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 1

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 1

Echinops_telfairi_76 (Small Madagascar hedgehog) 1

Macropus_eugenii_76_1.0 (Tammar wallaby) 1

Saccoglossus_kowalevskii_v3.0 1

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 1

Gadus_morhua_76_1 (Atlantic cod) 2

Astyanax_mexicanus_76 (Mexican tetra) 1

Heliconius_melpomene_ (Postman butterfly) 1

Harpegnathos_saltator_v3.3 (Jerdon's jumping ant) 0

Pogonomyrmex_barbatus_v1.2 (Red harvester ant) 0

Drosophila_grimshawi_1.3 1

Drosophila_willistoni_1.3 0

Drosophila_yakuba_1.3 0

Drosophila_simulans_1.3 0

Drosophila_sechellia_1.3 0

Drosophila_melanogaster_76_5 (Fruit fly) 0

Drosophila_erecta_1.3 0

Drosophila_ananassae_1.3 1

Drosophila_virilis_1.2 0

Drosophila_mojavensis_1.3 1

Ixodes_scapularis__(Preliminary) (Black-legged tick) 1

Onchocerca_volvulus_22 1

Brugia_malayi_WS250 (Agent of lymphatic filariasis) 1

Caenorhabditis_japonica_ 1

Caenorhabditis_brenneri_ 0

Caenorhabditis_elegans_76_235 (Roundworm) 0

Caenorhabditis_briggsae_2 0

Trichinella_spiralis_22 1

Hymenolepis_microstoma_ 1

Echinococcus_multilocularis_ 1

Echinococcus_granulosus_ 1

Taenia_solium_ (Pork tapeworm) 1

Hydra_vulgaris 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome Number

Drosophila_melanogaster_FlyBase_5.12_(FlyBase) (Fruit fly) 0

Caenorhabditis_elegans_WormBase_WS218__(WormBase) (Roundworm) 0

Longest transcript per gene
Genome Number

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 1

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 1

Echinops_telfairi_69 (Small Madagascar hedgehog) 1

Macropus_eugenii_69_1.0 (Tammar wallaby) 1

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 1

Gadus_morhua_69_1 (Atlantic cod) 2

Drosophila_melanogaster_69_5 (Fruit fly) 0

Caenorhabditis_elegans_69_215 (Roundworm) 0

Others
Genome Number

Loa_loa_v3.3_(Request) (Eye worm) 1

STRING_v9.0.5_(STRING) 6

NCBI_2017_08_genome 49

Uniprot_2018_03_genome 3240

TargetDB__(Targets) 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]