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Domain combinations for 52058,57184,52058,57184,_gap_,56112,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52058 - L domain-like
57184 - Growth factor receptor domain
52058 - L domain-like
57184 - Growth factor receptor domain
56112 - Protein kinase-like (PK-like)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   12
Pan_troglodytes_76_2.1.4   (Chimpanzee)   3
Gorilla_gorilla_76_3.1   (Western gorilla)   2
Pongo_abelii_76_2   (Sumatran orangutan)   4
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   4
Papio_anubis_76   (Olive baboon)   2
Macaca_mulatta_76_1   (Rhesus monkey)   5
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   8
Otolemur_garnettii_76_3   (Small-eared galago)   3
Microcebus_murinus_76_1   (Gray mouse lemur)   3
Rattus_norvegicus_76_5.0   (Norway rat)   6
Mus_musculus_76_38   (House mouse)   5
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   3
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   3
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   3
Cavia_porcellus_76_3   (Domestic guinea pig)   3
Oryctolagus_cuniculus_76_2   (Rabbit)   4
Ochotona_princeps_76   (American pika)   3
Tupaia_belangeri_76   (Northern tree shrew)   3
Sus_scrofa_76_10.2   (Pig)   2
Bos_taurus_76_3.1   (Cattle)   3
Ovis_aries_76_3.1   (Sheep)   3
Vicugna_pacos_76_1   (Alpaca)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   3
Mustela_putorius_furo_76_1.0   (Domestic ferret)   3
Ailuropoda_melanoleuca_76_1   (Giant panda)   3
Canis_familiaris_76_3.1   (Dog)   3
Felis_catus_76_6.2   (Domestic cat)   4
Equus_caballus_76_2   (Horse)   6
Myotis_lucifugus_76_2.0   (Little brown bat)   3
Pteropus_vampyrus_76_1   (Large flying fox)   4
Sorex_araneus_76_1   (European shrew)   2
Erinaceus_europaeus_76   (Western European hedgehog)   1
Procavia_capensis_76_1   (Cape rock hyrax)   1
Loxodonta_africana_76_3   (African savanna elephant)   4
Echinops_telfairi_76   (Small Madagascar hedgehog)   3
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   2
Macropus_eugenii_76_1.0   (Tammar wallaby)   2
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   2
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   4
Ornithorhynchus_anatinus_76_5   (Platypus)   2
Meleagris_gallopavo_76_2   (Turkey)   2
Gallus_gallus_76_4   (Chicken)   3
Anas_platyrhynchos_76_1.0   (Mallard)   2
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   2
Ficedula_albicollis_76_1.0   (Collared flycatcher)   4
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   3
Anolis_carolinensis_76_2.0   (Green anole)   4
Xenopus_laevis_   (African clawed frog)   4
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   3
Latimeria_chalumnae_76_1   (Coelacanth)   1
Lepisosteus_oculatus_76   (Spotted gar)   5
Gadus_morhua_76_1   (Atlantic cod)   4
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   8
Takifugu_rubripes_76_4   (Torafugu)   24
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   5
Oryzias_latipes_76_1   (Japanese medaka)   6
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   6
Poecilia_formosa_76   (Amazon molly)   6
Oreochromis_niloticus_76_1.0   (Nile tilapia)   10
Astyanax_mexicanus_76   (Mexican tetra)   4
Danio_rerio_76_9   (Zebrafish)   7
Oikopleura_dioica 1
Ciona_intestinalis_76   (Vase tunicate)   1
Helobdella_robusta_ 1
Linepithema_humile_v1.1   (Argentine ant)   1
Meloidogyne_incognita_   (Southern root-knot nematode)   1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1
Caenorhabditis_brenneri_ 1
Schistosoma_mansoni_ 1
Proterospongia_sp._ATCC_50818_ 1
Monosiga_brevicollis_ 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   4

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   4
Pan_troglodytes_69_2.1.4   (Chimpanzee)   3
Gorilla_gorilla_69_3.1   (Western gorilla)   2
Pongo_abelii_69_2   (Sumatran orangutan)   4
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   4
Macaca_mulatta_69_1   (Rhesus monkey)   3
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   4
Otolemur_garnettii_69_3   (Small-eared galago)   3
Microcebus_murinus_69_1   (Gray mouse lemur)   3
Rattus_norvegicus_69_3.4   (Norway rat)   4
Mus_musculus_69_38   (House mouse)   4
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   3
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   3
Cavia_porcellus_69_3   (Domestic guinea pig)   3
Oryctolagus_cuniculus_69_2   (Rabbit)   4
Ochotona_princeps_69   (American pika)   3
Tupaia_belangeri_69   (Northern tree shrew)   3
Sus_scrofa_69_10.2   (Pig)   1
Bos_taurus_69_3.1   (Cattle)   3
Vicugna_pacos_69_1   (Alpaca)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   3
Mustela_putorius_furo_69_1.0   (Domestic ferret)   3
Ailuropoda_melanoleuca_69_1   (Giant panda)   3
Canis_familiaris_69_3.1   (Dog)   3
Felis_catus_69   (Domestic cat)   3
Equus_caballus_69_2   (Horse)   4
Myotis_lucifugus_69_2.0   (Little brown bat)   3
Pteropus_vampyrus_69_1   (Large flying fox)   4
Sorex_araneus_69_1   (European shrew)   2
Erinaceus_europaeus_69   (Western European hedgehog)   1
Procavia_capensis_69_1   (Cape rock hyrax)   1
Loxodonta_africana_69_3   (African savanna elephant)   3
Echinops_telfairi_69   (Small Madagascar hedgehog)   3
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1
Macropus_eugenii_69_1.0   (Tammar wallaby)   2
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   2
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   4
Ornithorhynchus_anatinus_69_5   (Platypus)   2
Meleagris_gallopavo_69_2   (Turkey)   1
Gallus_gallus_69_2   (Chicken)   2
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   2
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   2
Anolis_carolinensis_69_2.0   (Green anole)   3
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   3
Latimeria_chalumnae_69_1   (Coelacanth)   1
Gadus_morhua_69_1   (Atlantic cod)   4
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   7
Takifugu_rubripes_69_4   (Torafugu)   7
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   5
Oryzias_latipes_69_1   (Japanese medaka)   6
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   6
Oreochromis_niloticus_69_1.0   (Nile tilapia)   7
Danio_rerio_69_9   (Zebrafish)   4
Ciona_intestinalis_69   (Vase tunicate)   1

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   13
Homo_sapiens__(NCBI_version)   (Human)   6
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   4
STRING_v9.0.5_(STRING) 91
Uniprot_2018_03_genome 16056
NCBI_2017_08_genome 1339
TargetDB__(Targets) 3

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