SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 52058,_gap_,49299,56436,_gap_,49299,49299,49299,49299,49299,49299,49299,49299,_gap_,49299,49299,49299,_gap_,49299,_gap_,49723,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52058 - L domain-like
49299 - PKD domain
56436 - C-type lectin-like
49299 - PKD domain
49299 - PKD domain
49299 - PKD domain
49299 - PKD domain
49299 - PKD domain
49299 - PKD domain
49299 - PKD domain
49299 - PKD domain
49299 - PKD domain
49299 - PKD domain
49299 - PKD domain
49299 - PKD domain
49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Meleagris_gallopavo_76_2   (Turkey)   1
Gallus_gallus_76_4   (Chicken)   1

Longest transcript per gene
Genome     Number
Meleagris_gallopavo_69_2   (Turkey)   1
Gallus_gallus_69_2   (Chicken)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 4400
NCBI_2017_08_genome 43

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