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Home > SCOP hierarchy > Domain combination - 52087,46966,46966,_gap_,46966,46966,_gap_,46966,_gap_,46966,_gap_,48065,50729,50044,_gap_,48065,50729,_gap_,50044,_gap_,48726,56112

Domain combinations for 52087,46966,46966,_gap_,46966,46966,_gap_,46966,_gap_,46966,_gap_,48065,50729,50044,_gap_,48065,50729,_gap_,50044,_gap_,48726,56112 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52087 - CRAL/TRIO domain
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
48065 - DBL homology domain (DH-domain)
50729 - PH domain-like
50044 - SH3-domain
48065 - DBL homology domain (DH-domain)
50729 - PH domain-like
50044 - SH3-domain
48726 - Immunoglobulin
56112 - Protein kinase-like (PK-like)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 0

Pan_troglodytes_76_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_76_3.1 (Western gorilla) 1

Pongo_abelii_76_2 (Sumatran orangutan) 1

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 1

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 2

Otolemur_garnettii_76_3 (Small-eared galago) 1

Rattus_norvegicus_76_5.0 (Norway rat) 0

Mus_musculus_76_38 (House mouse) 0

Cavia_porcellus_76_3 (Domestic guinea pig) 0

Oryctolagus_cuniculus_76_2 (Rabbit) 1

Ochotona_princeps_76 (American pika) 1

Bos_taurus_76_3.1 (Cattle) 1

Mustela_putorius_furo_76_1.0 (Domestic ferret) 1

Ailuropoda_melanoleuca_76_1 (Giant panda) 1

Canis_familiaris_76_3.1 (Dog) 1

Felis_catus_76_6.2 (Domestic cat) 1

Equus_caballus_76_2 (Horse) 2

Loxodonta_africana_76_3 (African savanna elephant) 1

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 1

Ornithorhynchus_anatinus_76_5 (Platypus) 1

Meleagris_gallopavo_76_2 (Turkey) 1

Gallus_gallus_76_4 (Chicken) 1

Anas_platyrhynchos_76_1.0 (Mallard) 1

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 1

Ficedula_albicollis_76_1.0 (Collared flycatcher) 0

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 2

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 2

Lepisosteus_oculatus_76 (Spotted gar) 1

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 3

Takifugu_rubripes_76_4 (Torafugu) 4

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 2

Oryzias_latipes_76_1 (Japanese medaka) 1

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 1

Poecilia_formosa_76 (Amazon molly) 1

Oreochromis_niloticus_76_1.0 (Nile tilapia) 3

Danio_rerio_76_9 (Zebrafish) 0

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Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 2

Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 0

Pan_troglodytes_69_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_69_3.1 (Western gorilla) 1

Pongo_abelii_69_2 (Sumatran orangutan) 1

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 1

Otolemur_garnettii_69_3 (Small-eared galago) 1

Rattus_norvegicus_69_3.4 (Norway rat) 1

Mus_musculus_69_38 (House mouse) 0

Cavia_porcellus_69_3 (Domestic guinea pig) 0

Oryctolagus_cuniculus_69_2 (Rabbit) 1

Ochotona_princeps_69 (American pika) 1

Bos_taurus_69_3.1 (Cattle) 1

Mustela_putorius_furo_69_1.0 (Domestic ferret) 1

Ailuropoda_melanoleuca_69_1 (Giant panda) 1

Canis_familiaris_69_3.1 (Dog) 1

Equus_caballus_69_2 (Horse) 1

Loxodonta_africana_69_3 (African savanna elephant) 1

Ornithorhynchus_anatinus_69_5 (Platypus) 1

Meleagris_gallopavo_69_2 (Turkey) 1

Gallus_gallus_69_2 (Chicken) 1

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 1

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 1

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 1

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 2

Takifugu_rubripes_69_4 (Torafugu) 2

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 2

Oryzias_latipes_69_1 (Japanese medaka) 1

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 3

Danio_rerio_69_9 (Zebrafish) 0

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 0

Homo_sapiens__(NCBI_version) (Human) 0

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 0

STRING_v9.0.5_(STRING) 17

Uniprot_2018_03_genome 17840

NCBI_2017_08_genome 192

TargetDB__(Targets) 1

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Domain combinations for 52087,46966,46966,_gap_,46966,46966,_gap_,46966,_gap_,46966,_gap_,48065,50729,50044,_gap_,48065,50729,_gap_,50044,_gap_,48726,56112 superfamilies in groups of genomes