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Home > SCOP hierarchy > Domain combination - 52113,52113,_gap_,52113,_gap_,57903

Domain combinations for 52113,52113,_gap_,52113,_gap_,57903 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52113 - BRCT domain
52113 - BRCT domain
52113 - BRCT domain
57903 - FYVE/PHD zinc finger

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Theobroma_cacao_B97-61/B2_v1 (Cacao) 1

Gossypium_raimondii_v221 1

Citrus_sinensis_v154 (Sweet orange) 1

Carica_papaya_ (Papaya) 1

Medicago_truncatula_ (Barrel medic) 1

Phaseolus_vulgaris_v186 (French bean) 1

Glycine_max_v109 (Soybean) 1

Cucumis_sativus_v122 (Cucumber) 1

Fragaria_vesca_ (Wild strawberry) 1

Malus_domestica_v196 (Apple) 2

Prunus_persica_v139 (Peach) 1

Linum_usitatissimum_v200 (Flax) 1

Manihot_esculenta_v147 (Cassava) 1

Populus_trichocarpa_v156 (Black cottonwood) 1

Mimulus_guttatus_v140 (Spotted monkey flower) 1

Solanum_lycopersicum_v.2.3 (Tomato) 1

Actinidia_chinensis_Hongyang_ 2

Aquilegia_coerulea_v195 1

Triticum_urartu_22 1

Triticum_aestivum_22 (Bread wheat) 1

Aegilops_tauschii_22 1

Brachypodium_distachyon_ (Stiff brome) 0

Oryza_barthii_22 (African wild rice) 1

Oryza_glumaepatula_22 1

Oryza_punctata_22 1

Oryza_nivara_22 1

Oryza_brachyantha_22 (Malo sina) 1

Oryza_sativa_ssp._japonica_5.0 (Japanese rice) 1

Oryza_sativa_v193 (Rice) 1

Phyllostachys_heterocyclavar._pubescens (Kikko-chiku) 0

Zea_mays_subsp._mays_ (Maize) 1

Zea_mays_v181 (Maize) 1

Musa_balbisiana (Balbis banana) 0

Musa_acuminata_22 (Wild Malaysian banana) 1

Amborella_trichopoda_22 1

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Strains
Genome Number

Theobroma_cacao_Matina_1-6_v0.9 (Cacao) 1

Hordeum_vulgare_22 (Domesticated barley) 1

Oryza_sativa_ssp._Indica_(Subspecies) (Long-grained rice) 1

Others
Genome Number

Lotus_japonicus__(Early_assembly) 1

Malus_x_domestica_(Duplicate) (Apple) 2

Nicotiana_benthamiana_0.4.4_(Early_draft) 1

Solanum_pimpinellifolium_A-1.0_(Early_draft) (Currant tomato) 1

Solanum_lycopersicum_v2.3_(Early_assembly) (Tomato) 1

Phoenix_dactylifera__(Early_draft) (Date palm) 1

STRING_v9.0.5_(STRING) 4

NCBI_2017_08_genome 87

Uniprot_2018_03_genome 1428

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