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Domain combinations for 52172,55785,55785,47384,55874,52172 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52172 - CheY-like
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain)
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Microcoleus_sp._PCC_7113 3
Gloeocapsa_sp._PCC_7428 0
Calothrix_sp._PCC_7507 1
Anabaena_variabilis_ATCC_29413 0
Nostoc_sp._PCC_7107 2
Nostoc_punctiforme_PCC_73102 2
Nostoc_sp._PCC_7120 0
Nostoc_sp._PCC_7524 1
Clostridium_thermocellum_ATCC_27405 0
Chloroherpeton_thalassium_ATCC_35110 1
Planctomyces_limnophilus_DSM_3776 0
Coraliomargarita_akajimensis_DSM_45221 1
Opitutus_terrae_PB90-1 1
Denitrovibrio_acetiphilus_DSM_12809 1
Desulfarculus_baarsii_DSM_2075 0
Desulfobulbus_propionicus_DSM_2032 1
Desulfovibrio_alaskensis_G20 1
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 0
Desulfovibrio_africanus_str._Walvis_Bay 0
Geobacter_sp._M21 1
Geobacter_uraniireducens_Rf4 1
Geobacter_bemidjiensis_Bem 1
Haliangium_ochraceum_DSM_14365 0
Sorangium_cellulosum_'So_ce_56' 0
Myxococcus_xanthus_DK_1622 1
Myxococcus_fulvus_HW-1 1
Gallionella_capsiferriformans_ES-2 0
Magnetococcus_marinus_MC-1 0
Phenylobacterium_zucineum_HLK1 0
Stenotrophomonas_maltophilia_K279a 0
Allochromatium_vinosum_DSM_180 0
Pseudomonas_entomophila_L48 1
Pseudomonas_stutzeri_A1501 1
Pseudomonas_fulva_12-X 1
Pseudomonas_putida_F1 1
Pseudomonas_sp._VLB120 1
Methanosphaerula_palustris_E1-9c 1

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Strains
Genome     Number
Crinalium_epipsammum_PCC_9333 0
Oscillatoria_nigro-viridis_PCC_7112 0
Oscillatoria_acuminata_PCC_6304 0
Cyanothece_sp._PCC_7822 0
Stanieria_cyanosphaera_PCC_7437 1
Calothrix_parietina_Calothrix_sp._PCC_6303 2
Cylindrospermum_stagnale_PCC_7417 1
Clostridium_thermocellum_DSM_1313 0
Desulfovibrio_vulgaris_RCH1 1
Desulfovibrio_vulgaris_str._'Miyazaki_F' 0
Desulfovibrio_vulgaris_str._Hildenborough 0
Geobacter_sp._M18 1
Sorangium_cellulosum_So0157-2 1
Myxococcus_stipitatus_DSM_14675 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 0
Rhodopseudomonas_palustris_TIE-1 0
Rhodopseudomonas_palustris_HaA2 0
Rhodopseudomonas_palustris_BisB5 0
Stenotrophomonas_maltophilia_D457 1
Stenotrophomonas_maltophilia_JV3 1
Pseudomonas_stutzeri_CCUG_29243 1
Pseudomonas_stutzeri_DSM_4166 1
Pseudomonas_stutzeri_RCH2 1
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 1
Pseudomonas_monteilii_SB3101 1
Pseudomonas_monteilii_SB3078 1
Pseudomonas_putida_HB3267 1
Pseudomonas_putida_NBRC_14164 1
Pseudomonas_putida_DOT-T1E 1
Pseudomonas_putida_S16 1
Pseudomonas_putida_BIRD-1 1
Pseudomonas_putida_W619 1
Pseudomonas_putida_ND6 1
Pseudomonas_putida_KT2440 1
Pseudomonas_putida_GB-1 1

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Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 0
TargetDB__(Targets) 1
STRING_v9.0.5_(STRING) 16
Uniprot_2018_03_genome 8816
NCBI_2017_08_genome 628

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