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Domain combinations for 52540,47473,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52540 - P-loop containing nucleoside triphosphate hydrolases
47473 - EF-hand

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Erinaceus_europaeus_76   (Western European hedgehog)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Poecilia_formosa_76   (Amazon molly)   0
Caenorhabditis_japonica_ 1
Echinococcus_multilocularis_ 0
Echinococcus_granulosus_ 0
Taenia_solium_   (Pork tapeworm)   1
Schistosoma_mansoni_ 0
Monosiga_brevicollis_ 1
Rhodotorula_graminis_WP1_v1.0 0
Allomyces_macrogynus_ATCC_38327_ 0
Medicago_truncatula_   (Barrel medic)   1
Manihot_esculenta_v147   (Cassava)   1
Solanum_lycopersicum_v.2.3   (Tomato)   1
Solanum_tuberosum_   (Potato)   1
Musa_acuminata_22   (Wild Malaysian banana)   1
Coccomyxa_subellipsoidea_sp._C-169_v2 1
Asterochloris_sp._Cgr/DA1pho_v1.0 1
Chlorella_variabilis_sp._NC64A_ 1
Volvox_carteri_f._nagariensis_ 1
Volvox_carteri_v199 1
Chlamydomonas_reinhardtii_4.0 0
Bigelowiella_natans_CCMP2755_22 1
Cyanophora_paradoxa_ 1
Albugo_laibachii_22 1
Pythium_iwayamai_DAOM_BR242034_22 1
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_ultimum_v1.7-2 1
Pythium_aphanidermatum_DAOM_BR444_22 1
Pythium_vexans_DAOM_BR484_22 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1
Phytophthora_sojae_1.1 1
Phytophthora_infestans_T30-4_ 1
Hyaloperonospora_arabidopsidis_22 1
Phaeodactylum_tricornutumCCAP_1055/1 0
Fragilariopsis_cylindrus 1
Paramecium_tetraurelia_ 3
Tetrahymena_thermophila_SB210_1_ 1
Symbiodinium_minutum_clade_B1_v1.2 1
Guillardia_theta_CCMP2712_v1.0_ 1

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Longest transcript per gene
Genome     Number
Felis_catus_69   (Domestic cat)   1
Erinaceus_europaeus_69   (Western European hedgehog)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   1

Others
Genome     Number
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
STRING_v9.0.5_(STRING) 6
NCBI_2017_08_genome 35
Uniprot_2018_03_genome 558

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