SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 52540,52540,81271 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
81271 - TGS-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Ochotona_princeps_76   (American pika)   1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Drosophila_yakuba_1.3 1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Pythium_irregulare_DAOM_BR486_22 1

Strains
Genome     Number
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1

Longest transcript per gene
Genome     Number
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Ochotona_princeps_69   (American pika)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
NCBI_2017_08_genome 2
Uniprot_2018_03_genome 65

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